Literature DB >> 31475197

Whole exome sequencing identifies a rare variant in DAAM2 as a potential candidate in idiopathic pulmonary ossification.

Sheng-Wen Sun1, Mei Zhou1, Long Chen1, Jiang-Hua Wu1, Zhao-Ji Meng1, Shuai-Ying Miao1, Hong-Li Han1, Chen-Chen Zhu1, Xian-Zhi Xiong1.   

Abstract

BACKGROUND: Diffuse pulmonary ossification (DPO) is a rare disease characterized by bone tissue formation in the lung. DPO can be classified into idiopathic pulmonary ossification (IPO) and secondary pulmonary ossification. Cases with no identified etiology are classified as IPO. Variants of dishevelled associated activator of morphogenesis 2 (DAAM2) have been reported to be involved in the bone-resorption of osteoclasts.
METHODS: Whole exome sequencing (WES) was used on samples from a patient with IPO and his healthy parents. The effects of all variants were determined using functional predictors (PolyPhen-2, SIFT, FATHMM and MutationTaster); variants existing only in the patient were further screened compared with his healthy parents.
RESULTS: Forty deleterious variants, including 25 single nucleotide variants (SNVs) and 15 insertions and deletions (indels), were identified by WES. Finally, DAAM2 (c.G2960T:p.R987L) was screened by pathway analysis.
CONCLUSIONS: We identified a novel variant of DAAM2 (c.G2960T:p.R987L) that might participate in the disease process of IPO.

Entities:  

Keywords:  Idiopathic pulmonary ossification (IPO); dishevelled associated activator of morphogenesis 2 (DAAM2); heterotopic ossification, genetic variants; whole exome sequencing (WES)

Year:  2019        PMID: 31475197      PMCID: PMC6694274          DOI: 10.21037/atm.2019.06.14

Source DB:  PubMed          Journal:  Ann Transl Med        ISSN: 2305-5839


  51 in total

1.  [Dendriform pulmonary ossification associated with idiopathic pulmonary fibrosis].

Authors:  O Trejo; A Xaubet; A Marin-Arguedas; A Torres; J Ramírez; P Luburich
Journal:  Arch Bronconeumol       Date:  2002-08       Impact factor: 4.872

2.  SIFT: Predicting amino acid changes that affect protein function.

Authors:  Pauline C Ng; Steven Henikoff
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

3.  Familial clustering of dendriform pulmonary ossification.

Authors:  Arata Azuma; Haruko Miyamoto; Tatsuji Enomoto; Jiro Usuki; Shoji Kudoh
Journal:  Sarcoidosis Vasc Diffuse Lung Dis       Date:  2003-06       Impact factor: 0.670

4.  Dendriform pulmonary ossification, a form of diffuse pulmonary ossification: report of a 26-year autopsy experience.

Authors:  Jonathan F Lara; James F Catroppo; Dae U Kim; Deline da Costa
Journal:  Arch Pathol Lab Med       Date:  2005-03       Impact factor: 5.534

5.  Idiopathic diffuse pulmonary ossification.

Authors:  C F Ryan; J D Flint; N L Müller
Journal:  Thorax       Date:  2004-11       Impact factor: 9.139

6.  Diffuse pulmonary ossification: an uncommon incidental autopsy finding.

Authors:  Jason Tseung; Johan Duflou
Journal:  Pathology       Date:  2006-02       Impact factor: 5.306

7.  [Diffuse pulmonary ossifications with mortal consequences. A case report].

Authors:  M Reinehr; M Rittinger; D Müller-Wening; T Wagner; A Gabelmann; P Möller; Stefanie Scheil
Journal:  Pathologe       Date:  2003-02-12       Impact factor: 1.011

Review 8.  Diffuse pulmonary ossification: an unusual interstitial lung disease.

Authors:  Tatjana Peros-Golubicić; Jasna Tekavec-Trkanjec
Journal:  Curr Opin Pulm Med       Date:  2008-09       Impact factor: 3.155

9.  Classic and atypical fibrodysplasia ossificans progressiva (FOP) phenotypes are caused by mutations in the bone morphogenetic protein (BMP) type I receptor ACVR1.

Authors:  Frederick S Kaplan; Meiqi Xu; Petra Seemann; J Michael Connor; David L Glaser; Liam Carroll; Patricia Delai; Elisabeth Fastnacht-Urban; Stephen J Forman; Gabriele Gillessen-Kaesbach; Julie Hoover-Fong; Bernhard Köster; Richard M Pauli; William Reardon; Syed-Adeel Zaidi; Michael Zasloff; Rolf Morhart; Stefan Mundlos; Jay Groppe; Eileen M Shore
Journal:  Hum Mutat       Date:  2009-03       Impact factor: 4.878

Review 10.  Calcium deposition with or without bone formation in the lung.

Authors:  Edward D Chan; Donald V Morales; Carolyn H Welsh; Michael T McDermott; Marvin I Schwarz
Journal:  Am J Respir Crit Care Med       Date:  2002-06-15       Impact factor: 21.405

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  1 in total

Review 1.  Formins in Human Disease.

Authors:  Leticia Labat-de-Hoz; Miguel A Alonso
Journal:  Cells       Date:  2021-09-27       Impact factor: 6.600

  1 in total

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