| Literature DB >> 31466370 |
Jing-Wen Cao1, Jia-Yi Chen1, Xiao-Ling Qin1, Xu-Liang Zhu1, Lu Jiang1, Yue Gu1, Xu-Hao Yu1, Peng Zhang2.
Abstract
The vibrational spectrum of ice II was investigated using the CASTEP code based on first-principles density functional theory (DFT). Based on good agreement with inelastic neutron scattering (INS), infrared (IR), and Raman experimental data, we discuss the translation, libration, bending, and stretching band using normal modes analysis method. In the translation band, we found that the four-bond and two-bond molecular vibration modes constitute three main peaks in accordance with INS ranging from 117 to 318 cm-1. We also discovered that the lower frequencies are cluster vibrations that may overlap with acoustic phonons. Whale et al. found in ice XV that some intramolecular vibrational modes include many isolated-molecule stretches of only one O-H bond, whereas the other O-H bond does not vibrate. This phenomenon is very common in ice II, and we attribute it to local tetrahedral deformation. The pathway of combining normal mode analysis with experimental spectra leads to scientific assignments.Entities:
Keywords: CASTEP; density functional theory; first principles; hydrogen bond; ice II; translational modes
Year: 2019 PMID: 31466370 PMCID: PMC6749557 DOI: 10.3390/molecules24173135
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Simulated spectrum of ice II. The four images correspond to four vibration bands: translation, libration, bending, and stretching. From top to bottom: phonon density of states (PDOS), IR, and Raman spectra. Weak peaks have been amplified reasonably.
Comparison of calculated results with inelastic neutron scattering (INS), IR, and Raman data. The main peaks of phonon density of states (PDOS) in the first column are compared against the INS spectrum. Normal modes (numbers in brackets indicate the degeneracies) are compared against experimental IR and Raman peaks. The values are expressed in cm−1.
| PDOS | INS [ | Normal Modes | IR [ | Raman [ |
|---|---|---|---|---|
| 41 | 39 | 54 (2) | ||
| 76 | 83 | 82 (2) | ||
| 86 | ||||
| 90 (2) | 72 | |||
| 93 | ||||
| 102 | 96 | 115 | ||
| 117 | 104 | |||
| 118 (2) | ||||
| 130 (2) | 107 | |||
| 135 | ||||
| 142 | ||||
| 147 | 154 (2) | 152 | ||
| 129 | 157 | 136 | ||
| 153 | 164 (2) | 151 | ||
| 185 | 176 | 187 | ||
| 198 | 206 (2) | 186 | ||
| 206 | 219 | 200 | ||
| 221 | 239 | 223 (2) | 253 | |
| 267 | 262 (2) | 262 | ||
| 282 | 294 | 293 | 295 | |
| 298 (2) | 268 | |||
| 302 | 327 | 318 | 335 | 322 |
| 513 | 477 | 522 (2) | 489 | |
| 523 (2) | 473 | |||
| 483 | ||||
| 498 | ||||
| 527 | 516 | |||
| 529 | 548 | 538 | 495 | |
| 585 | 597 | 533 | ||
| 599 (2) | 573 | |||
| 610 | 597 | |||
| 607 | 611 | 544 | ||
| 635 | 630 (2) | 593 | ||
| 654 | 617 | |||
| 646 | 655 (2) | 642 | ||
| 690 | 657 (2) | 648 | ||
| 660 | 660 | |||
| 712 | 733 | 700 | ||
| 738 | 752 | 685 | ||
| 753 | 746 | 774 (2) | 715 | |
| 790 | 804 (2) | 775 | ||
| 805 | 815 (2) | 745 | ||
| 838 | 844 (2) | 800 | ||
| 851 | 895 | 853 (2) | 845 | |
| 871 | 835 | |||
| 884 | 881 (2) | 960 | ||
| 904 | 909 | 950 | ||
| 954 | 969 | |||
| 1066 | ||||
| 1664 | 1669 | 1659 (2) | ||
| 1661 | ||||
| 1665 (2) | ||||
| 1680 | 1690 | |||
| 1686 (2) | ||||
| 1699 | 1703 | |||
| 1708 | ||||
| 1723 (2) | 1748 | |||
| 2220 | ||||
| 2300 | ||||
| 3207 | 3193 | 3189 | ||
| 3198 | 3225 | |||
| 3242 | 3387 | 3227 (2) | 3000 | |
| 3245 (2) | 3225 | |||
| 3279 (2) | ||||
| 3303 | 3304 | 3280 | ||
| 3327 | 3321 (2) | 3270 | ||
| 3335 | 3390 | |||
| 3414 | 3393 | 3306 | ||
| 3438 | 3405 (2) | 3340 | ||
| 3412 | 3470 | |||
| 3425 (2) | ||||
| 3456 | ||||
| 3488 | 3466 (2) | 3400 | ||
| 3469 (2) | 3500 | |||
| 3483 | 3465 |
Figure 2Top view of six normal modes in the translation band (115, 206, and 318 cm−1) and libration band (522, 733, and 774 cm−1). Green arrows represent vibration direction in sizes proportional to the vibration amplitude.
Figure 3Fitted curves of four-bond modes (blue), two-bond modes (red), and cluster modes (green) of ice II in the translation band. The inset PDOS curve is shown for comparison. Note that the fitted curves are related to the Brillouin zone (BZ) center only, while the PDOS is integrated over the entire BZ.
Figure 4Top view of six normal modes in the bending band (1659, 1703, and 1723 cm−1) and stretching band (3193, 3393, and 3483 cm−1). The “isolated mode” can be seen in each stretching mode.