Literature DB >> 31453569

Learning High-dimensional Directed Acyclic Graphs with Mixed Data-types.

Bryan Andrews1, Joseph Ramsey2, Gregory F Cooper3.   

Abstract

In recent years, great strides have been made for causal structure learning in the high-dimensional setting and in the mixed data-type setting when there are both discrete and continuous variables. However, due to the complications involved with modeling continuous-discrete variable interactions, the intersection of these two settings has been relatively understudied. The current paper explores the problem of efficiently extending causal structure learning algorithms to high-dimensional data with mixed data-types. First, we characterize a model over continuous and discrete variables. Second, we derive a degenerate Gaussian (DG) score for mixed data-types and discuss its asymptotic properties. Lastly, we demonstrate the practicality of the DG score on learning causal structures from simulated data sets.

Entities:  

Keywords:  Causal Structure Learning; Directed Acyclic Graphs; High-dimensional Data; Mixed Data-types

Year:  2019        PMID: 31453569      PMCID: PMC6709674     

Source DB:  PubMed          Journal:  Proc Mach Learn Res


  4 in total

1.  Mixed graphical models for integrative causal analysis with application to chronic lung disease diagnosis and prognosis.

Authors:  Andrew J Sedgewick; Kristina Buschur; Ivy Shi; Joseph D Ramsey; Vineet K Raghu; Dimitris V Manatakis; Yingze Zhang; Jessica Bon; Divay Chandra; Chad Karoleski; Frank C Sciurba; Peter Spirtes; Clark Glymour; Panayiotis V Benos
Journal:  Bioinformatics       Date:  2019-04-01       Impact factor: 6.937

2.  Evaluation of Causal Structure Learning Methods on Mixed Data Types.

Authors:  Vineet K Raghu; Allen Poon; Panayiotis V Benos
Journal:  Proc Mach Learn Res       Date:  2018-08

3.  A million variables and more: the Fast Greedy Equivalence Search algorithm for learning high-dimensional graphical causal models, with an application to functional magnetic resonance images.

Authors:  Joseph Ramsey; Madelyn Glymour; Ruben Sanchez-Romero; Clark Glymour
Journal:  Int J Data Sci Anal       Date:  2016-12-01

4.  Scoring Bayesian Networks of Mixed Variables.

Authors:  Bryan Andrews; Joseph Ramsey; Gregory F Cooper
Journal:  Int J Data Sci Anal       Date:  2018-01-11
  4 in total
  5 in total

1.  Causal Structure Learning: A Combinatorial Perspective.

Authors:  Chandler Squires; Caroline Uhler
Journal:  Found Comut Math       Date:  2022-08-01       Impact factor: 3.439

2.  Thirteen Questions About Using Machine Learning in Causal Research (You Won't Believe the Answer to Number 10!).

Authors:  Stephen J Mooney; Alexander P Keil; Daniel J Westreich
Journal:  Am J Epidemiol       Date:  2021-08-01       Impact factor: 4.897

3.  Neurological Complications Acquired During Pediatric Critical Illness: Exploratory "Mixed Graphical Modeling" Analysis Using Serum Biomarker Levels.

Authors:  Vineet K Raghu; Christopher M Horvat; Patrick M Kochanek; Ericka L Fink; Robert S B Clark; Panayiotis V Benos; Alicia K Au
Journal:  Pediatr Crit Care Med       Date:  2021-10-01       Impact factor: 3.971

4.  Synthetic data generation with probabilistic Bayesian Networks.

Authors:  Grigoriy Gogoshin; Sergio Branciamore; Andrei S Rodin
Journal:  Math Biosci Eng       Date:  2021-10-09       Impact factor: 2.080

5.  CausalMGM: an interactive web-based causal discovery tool.

Authors:  Xiaoyu Ge; Vineet K Raghu; Panos K Chrysanthis; Panayiotis V Benos
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 19.160

  5 in total

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