| Literature DB >> 31440140 |
Vikram Babu Kasaragod1, Hermann Schindelin1.
Abstract
γ-Aminobutyric acid type A receptors (GABAARs) mediate the majority of fast synaptic inhibition in the central nervous system (CNS). GABAARs belong to the Cys-loop superfamily of pentameric ligand-gated ion channels (pLGIC) and are assembled from 19 different subunits. As dysfunctional GABAergic neurotransmission manifests itself in neurodevelopmental disorders including epilepsy and anxiety, GABAARs are key drug targets. The majority of synaptic GABAARs are anchored at the inhibitory postsynaptic membrane by the principal scaffolding protein gephyrin, which acts as the central organizer in maintaining the architecture of the inhibitory postsynaptic density (iPSD). This interaction is mediated by the long intracellular loop located in between transmembrane helices 3 and 4 (M3-M4 loop) of the receptors and a universal receptor-binding pocket residing in the C-terminal domain of gephyrin. In 2014, the crystal structure of the β3-homopentameric GABAAR provided crucial information regarding the architecture of the receptor; however, an understanding of the structure and assembly of heteropentameric receptors at the atomic level was lacking. This review article will highlight recent advances in understanding the structure of heteropentameric synaptic GABAARs and how these structures have provided fundamental insights into the assembly of these multi-subunit receptors as well as their modulation by diverse ligands including the physiological agonist GABA. We will further discuss the role of gephyrin in the anchoring of synaptic GABAARs and glycine receptors (GlyRs), which are crucial for maintaining the architecture of the iPSD. Finally, we will also summarize how anti-malarial artemisinin drugs modulate gephyrin-mediated inhibitory neurotransmission.Entities:
Keywords: Cryo-EM; GABA; GABAA receptors; PIP2; artemisinin; diazepam; gephyrin; inhibitory neurotransmission
Year: 2019 PMID: 31440140 PMCID: PMC6693554 DOI: 10.3389/fnmol.2019.00191
Source DB: PubMed Journal: Front Mol Neurosci ISSN: 1662-5099 Impact factor: 5.639
Figure 1Structures of heteropentameric γ-aminobutyric acid type A receptors (GABAARs). (A) Side view of the overall structure of the heteropentameric GABAAR as determined by cryo-electron microscopy (Cryo-EM). (B) Architecture of the receptor viewed from the extracellular side (top view) with the receptor subunits in cartoon representation and the glycans in ball and stick representation. (C) View of the receptor from the intracellular side into the ion-conducting pore (bottom view). (D) Close-up view of the glycosylation sites in the extracellular vestibule. The glycans and critical residues mediating their binding are shown in ball and stick representation. (E) Schematic representation of the underlying principle governing the assembly of synaptic heteropentameric GABAARs. The scheme demonstrates how glycosylation of the conserved Asn111 plays a crucial structural role in receptor assembly, which in turn also determines the order in which the subunits are arranged. (F–L) Structures of GABAARs bound to various ligands. (F) The heteropentameric GABAAR is shown in cartoon representation along with structurally validated ligands in space-filling representation. Enlarged views of the binding pockets of the natural agonist GABA (PDB: 6HUJ, G), the positive allosteric modulator (PAM) diazepam (PDB: 6HUP, H–I), the competitive antagonist bicuculline (PDB: 6HUK, J), the channel blocker picrotoxin (PDB: 6HUG, K) and the lipid PIP2 (PDB: 6I53, L). Enlarged views are shown according to the color of the box in the overall structure displayed in (F). In (F–L) all ligands and the critical residues which mediate binding are shown in ball and stick and the protein chains in cartoon representation.
Figure 2Alternative receptor clustering of the GABAARs by gephyrin and modulation by artemisinins. (A) Sequence alignment of the core binding motifs located in the M3–M4 loops of the glycine receptor (GlyR) β and GABAARs α1, α2 and α3 subunits. Structurally conserved aromatic residues are highlighted with red asterisks. The multiple sequence alignment is represented by using the ESPript server (Robert and Gouet, 2014). (B) Crystal structure of GephE in complex with the anti-malarial drug artesunate (PDB: 6FGC). One protomer of the dimeric E domain is shown in cartoon representation, with the four subdomains (indicated by Roman numerals) being colored differently. The second protomer is shown in surface representation in gray. The bound artesunate is shown in space-filling representation. (C) Enlarged view of the artesunate-binding pocket demonstrating that binding is mediated by residues present in subdomains III and IV of GephE. The bound artesunate and residues which mediate binding are shown in ball and stick representation. (D) Superimposition of the crystal structures of GephE in complex with artesunate (PDB: 6FGC) and the GephE-GABAAR-α3 subunit-derived peptide complex (PDB:4U90). (E) An enlarged view of the binding pocket of artemisinin or the N-terminal end of the peptide demonstrates that artesunate inhibits critical contacts (368FNI370) between the receptor and GephE.