Literature DB >> 31437957

Annotating Temporal Relations to Determine the Onset of Psychosis Symptoms.

Natalia Viani1, Joyce Kam1, Lucia Yin1, Somain Verma1, Robert Stewart1,2, Rashmi Patel1,2, Sumithra Velupillai1,3.   

Abstract

For patients with a diagnosis of schizophrenia, determining symptom onset is crucial for timely and successful intervention. In mental health records, information about early symptoms is often documented only in free text, and thus needs to be extracted to support clinical research. To achieve this, natural language processing (NLP) methods can be used. Development and evaluation of NLP systems requires manually annotated corpora. We present a corpus of mental health records annotated with temporal relations for psychosis symptoms. We propose a methodology for document selection and manual annotation to detect symptom onset information, and develop an annotated corpus. To assess the utility of the created corpus, we propose a pilot NLP system. To the best of our knowledge, this is the first temporally-annotated corpus tailored to a specific clinical use-case.

Entities:  

Keywords:  Electronic Health Records; Natural Language Processing; Schizophrenia

Mesh:

Year:  2019        PMID: 31437957     DOI: 10.3233/SHTI190255

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  4 in total

Review 1.  A scoping review of publicly available language tasks in clinical natural language processing.

Authors:  Yanjun Gao; Dmitriy Dligach; Leslie Christensen; Samuel Tesch; Ryan Laffin; Dongfang Xu; Timothy Miller; Ozlem Uzuner; Matthew M Churpek; Majid Afshar
Journal:  J Am Med Inform Assoc       Date:  2022-09-12       Impact factor: 7.942

2.  Annotation and extraction of age and temporally-related events from clinical histories.

Authors:  Judy Hong; Anahita Davoudi; Shun Yu; Danielle L Mowery
Journal:  BMC Med Inform Decis Mak       Date:  2020-12-30       Impact factor: 2.796

3.  A natural language processing approach for identifying temporal disease onset information from mental healthcare text.

Authors:  Natalia Viani; Riley Botelle; Jack Kerwin; Lucia Yin; Rashmi Patel; Robert Stewart; Sumithra Velupillai
Journal:  Sci Rep       Date:  2021-01-12       Impact factor: 4.379

4.  Temporal information extraction from mental health records to identify duration of untreated psychosis.

Authors:  Natalia Viani; Joyce Kam; Lucia Yin; André Bittar; Rina Dutta; Rashmi Patel; Robert Stewart; Sumithra Velupillai
Journal:  J Biomed Semantics       Date:  2020-03-10
  4 in total

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