Literature DB >> 31435846

Development and Evaluation of a Novel Armored RNA Technology Using Bacteriophage Qβ.

Lin Yao1, Fengling Li1, Meng Qu1, Yingying Guo1, Yanhua Jiang2, Lianzhu Wang1, Yuxiu Zhai1.   

Abstract

Foodborne viruses are a global threat to food safety. Real-time reverse transcription polymerase chain reaction (RT-PCR) is the most commonly used method to detect viral RNA in food. Armored RNA (AR) prepared using the MS2 phage system is a successful positive control for detecting foodborne viruses and is an important quality control process when using real-time RT-PCR. In this study, we report a novel technology for preparing AR using bacteriophage Qβ and compare its stability with AR prepared using the MS2 phage system for packaging norovirus detection target RNA. AR could be successfully and efficiently produced using the developed bacteriophage Qβ system. Two types of AR-AR-QNoV prepared using the Qβ system and AR-MNoV prepared using the MS2 system-were stored at different temperatures for different durations. After incubating at - 20 °C for 360 days, the copy numbers of AR-QNoV and AR-MNoV decreased by 8.9% and 35.9%, respectively. After incubating at 4 °C for 60 days, the copy numbers of AR-QNoV and AR-MNoV decreased by 12.0% and 38.9%, respectively. After incubating at 45 °C, the copy numbers of AR-QNoV decreased by 71.8% after 5 days, whereas those of AR-MNoV decreased by 92.9% after only 4 days. After 5 days, AR-MNoV could not be detected using real-time RT-PCR. There was a significant difference in copy numbers decrease rate between AR-QNoV and AR-MNoV at three different temperatures (P < 0.05 ). Therefore, AR prepared using the new bacteriophage Qβ system is more stable than the traditional AR, making the developed strategy a good candidate for AR preparation and quality control.

Entities:  

Keywords:  Armored RNA; Comparison; Norovirus; Qβ phage; Stability

Mesh:

Substances:

Year:  2019        PMID: 31435846     DOI: 10.1007/s12560-019-09400-5

Source DB:  PubMed          Journal:  Food Environ Virol        ISSN: 1867-0334            Impact factor:   2.778


  34 in total

Review 1.  Standardization of diagnostic PCR for the detection of foodborne pathogens.

Authors:  Burkhard Malorny; Panayotis T Tassios; Peter Rådström; Nigel Cook; Martin Wagner; Jeffrey Hoorfar
Journal:  Int J Food Microbiol       Date:  2003-05-25       Impact factor: 5.277

2.  Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR.

Authors:  Tsutomu Kageyama; Shigeyuki Kojima; Michiyo Shinohara; Kazue Uchida; Shuetsu Fukushi; Fuminori B Hoshino; Naokazu Takeda; Kazuhiko Katayama
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

3.  Inhibitory effects of urine on the polymerase chain reaction for cytomegalovirus DNA.

Authors:  G Khan; H O Kangro; P J Coates; R B Heath
Journal:  J Clin Pathol       Date:  1991-05       Impact factor: 3.411

4.  Armored RNA technology for production of ribonuclease-resistant viral RNA controls and standards.

Authors:  B L Pasloske; C R Walkerpeach; R D Obermoeller; M Winkler; D B DuBois
Journal:  J Clin Microbiol       Date:  1998-12       Impact factor: 5.948

5.  External quality assessment for enterovirus 71 and coxsackievirus A16 detection by reverse transcription-PCR using armored RNA as a virus surrogate.

Authors:  Liqiong Song; Shipeng Sun; Bo Li; Yang Pan; Wenli Li; Kuo Zhang; Jinming Li
Journal:  J Clin Microbiol       Date:  2011-08-24       Impact factor: 5.948

Review 6.  Molecular detection and genotyping of noroviruses.

Authors:  Ambroos Stals; Elisabeth Mathijs; Leen Baert; Nadine Botteldoorn; Sarah Denayer; Axel Mauroy; Alexandra Scipioni; Georges Daube; Katelijne Dierick; Lieve Herman; Els Van Coillie; Etienne Thiry; Mieke Uyttendaele
Journal:  Food Environ Virol       Date:  2012-11-04       Impact factor: 2.778

7.  External quality assessment for the detection of HCV RNA, HIV RNA and HBV DNA in plasma by nucleic acid amplification technology: a novel approach.

Authors:  G Pisani; F Marino; K Cristiano; G M Bisso; C Mele; F Luciani; M Wirz; G Gentili
Journal:  Vox Sang       Date:  2008-03-31       Impact factor: 2.144

8.  Engineered mutations change the structure and stability of a virus-like particle.

Authors:  Jason D Fiedler; Cody Higginson; Marisa L Hovlid; Alexander A Kislukhin; Alexandra Castillejos; Florian Manzenrieder; Melody G Campbell; Neil R Voss; Clinton S Potter; Bridget Carragher; M G Finn
Journal:  Biomacromolecules       Date:  2012-07-25       Impact factor: 6.988

9.  Optimization of PCR for quantification of simian immunodeficiency virus genomic RNA in plasma of rhesus macaques (Macaca mulatta) using armored RNA.

Authors:  C J Monjure; C D Tatum; A T Panganiban; M Arainga; V Traina-Dorge; P A Marx; E S Didier
Journal:  J Med Primatol       Date:  2013-11-22       Impact factor: 0.667

10.  Construction of armored RNA containing long-size chimeric RNA by increasing the number and affinity of the pac site in exogenous rna and sequence coding coat protein of the MS2 bacteriophage.

Authors:  Baojun Wei; Yuxiang Wei; Kuo Zhang; Changmei Yang; Jing Wang; Ruihuan Xu; Sien Zhan; Guigao Lin; Wei Wang; Min Liu; Lunan Wang; Rui Zhang; Jinming Li
Journal:  Intervirology       Date:  2008-07-01       Impact factor: 1.763

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