Literature DB >> 31434690

Identification of distinctive interferon gene signatures in different types of myositis.

Iago Pinal-Fernandez1, Maria Casal-Dominguez2, Assia Derfoul2, Katherine Pak2, Paul Plotz2, Frederick W Miller2, Jose C Milisenda2, Josep M Grau-Junyent2, Albert Selva-O'Callaghan2, Julie Paik2, Jemima Albayda2, Lisa Christopher-Stine2, Thomas E Lloyd2, Andrea M Corse2, Andrew L Mammen1.   

Abstract

OBJECTIVE: Activation of the type 1 interferon (IFN1) pathway is a prominent feature of dermatomyositis (DM) muscle and may play a role in the pathogenesis of this disease. However, the relevance of the IFN1 pathway in patients with other types of myositis such as the antisynthetase syndrome (AS), immune-mediated necrotizing myopathy (IMNM), and inclusion body myositis (IBM) is largely unknown. Moreover, the activation of the type 2 interferon (IFN2) pathway has not been comprehensively explored in myositis. In this cross-sectional study, our objective was to determine whether IFN1 and IFN2 pathways are differentially activated in different types of myositis by performing RNA sequencing on muscle biopsy samples from 119 patients with DM, IMNM, AS, or IBM and on 20 normal muscle biopsies.
METHODS: The expression of IFN1- and IFN2-inducible genes was compared between the different groups.
RESULTS: The expression of IFN1-inducible genes was high in DM, moderate in AS, and low in IMNM and IBM. In contrast, the expression of IFN2-inducible genes was high in DM, IBM, and AS but low in IMNM. The expression of IFN-inducible genes correlated with the expression of genes associated with inflammation and muscle regeneration. Of note, ISG15 expression levels alone performed as well as composite scores relying on multiple genes to monitor activation of the IFN1 pathway in myositis muscle biopsies.
CONCLUSIONS: IFN1 and IFN2 pathways are differentially activated in different forms of myositis. This observation may have therapeutic implications because immunosuppressive medications may preferentially target each of these pathways.
© 2019 American Academy of Neurology.

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Year:  2019        PMID: 31434690      PMCID: PMC6808530          DOI: 10.1212/WNL.0000000000008128

Source DB:  PubMed          Journal:  Neurology        ISSN: 0028-3878            Impact factor:   9.910


  37 in total

1.  Type I interferon-inducible gene expression in blood is present and reflects disease activity in dermatomyositis and polymyositis.

Authors:  Ronan J Walsh; Sek Won Kong; Yihong Yao; Bahija Jallal; Peter A Kiener; Jack L Pinkus; Alan H Beggs; Anthony A Amato; Steven A Greenberg
Journal:  Arthritis Rheum       Date:  2007-11

2.  Relationship between disease activity and type 1 interferon- and other cytokine-inducible gene expression in blood in dermatomyositis and polymyositis.

Authors:  S A Greenberg; B W Higgs; C Morehouse; R J Walsh; S Won Kong; P Brohawn; W Zhu; A Amato; M Salajegheh; B White; P A Kiener; B Jallal; Y Yao
Journal:  Genes Immun       Date:  2011-09-01       Impact factor: 2.676

3.  In vitro and in vivo secretion of human ISG15, an IFN-induced immunomodulatory cytokine.

Authors:  J D'Cunha; S Ramanujam; R J Wagner; P L Witt; E Knight; E C Borden
Journal:  J Immunol       Date:  1996-11-01       Impact factor: 5.422

4.  Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy.

Authors:  Mohammad Salajegheh; Sek Won Kong; Jack L Pinkus; Ronan J Walsh; Anne Liao; Remedios Nazareno; Anthony A Amato; Bryan Krastins; Chris Morehouse; Brandon W Higgs; Bahija Jallal; Yihong Yao; David A Sarracino; Kenneth C Parker; Steven A Greenberg
Journal:  Ann Neurol       Date:  2010-01       Impact factor: 10.422

5.  Sarcoplasmic MxA expression: A valuable marker of dermatomyositis.

Authors:  Akinori Uruha; Atsuko Nishikawa; Rie S Tsuburaya; Kohei Hamanaka; Masataka Kuwana; Yurika Watanabe; Shigeaki Suzuki; Norihiro Suzuki; Ichizo Nishino
Journal:  Neurology       Date:  2016-12-30       Impact factor: 9.910

Review 6.  Evaluation and construction of diagnostic criteria for inclusion body myositis.

Authors:  Thomas E Lloyd; Andrew L Mammen; Anthony A Amato; Michael D Weiss; Merrilee Needham; Steven A Greenberg
Journal:  Neurology       Date:  2014-06-27       Impact factor: 9.910

7.  JAK inhibitor improves type I interferon induced damage: proof of concept in dermatomyositis.

Authors:  Leandro Ladislau; Xavier Suárez-Calvet; Ségolène Toquet; Océane Landon-Cardinal; Damien Amelin; Marine Depp; Mathieu P Rodero; Denisa Hathazi; Darragh Duffy; Vincent Bondet; Corinna Preusse; Boris Bienvenu; Flore Rozenberg; Andreas Roos; Claudia F Benjamim; Eduard Gallardo; Isabel Illa; Vincent Mouly; Werner Stenzel; Gillian Butler-Browne; Olivier Benveniste; Yves Allenbach
Journal:  Brain       Date:  2018-06-01       Impact factor: 13.501

8.  Interferon and biologic signatures in dermatomyositis skin: specificity and heterogeneity across diseases.

Authors:  David Wong; Bory Kea; Rob Pesich; Brandon W Higgs; Wei Zhu; Patrick Brown; Yihong Yao; David Fiorentino
Journal:  PLoS One       Date:  2012-01-03       Impact factor: 3.240

9.  Newly identified pair of proteasomal subunits regulated reciprocally by interferon gamma.

Authors:  H Hisamatsu; N Shimbara; Y Saito; P Kristensen; K B Hendil; T Fujiwara; E Takahashi; N Tanahashi; T Tamura; A Ichihara; K Tanaka
Journal:  J Exp Med       Date:  1996-04-01       Impact factor: 14.307

10.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

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  25 in total

Review 1.  Idiopathic inflammatory myopathies.

Authors:  Ingrid E Lundberg; Manabu Fujimoto; Jiri Vencovsky; Rohit Aggarwal; Marie Holmqvist; Lisa Christopher-Stine; Andrew L Mammen; Frederick W Miller
Journal:  Nat Rev Dis Primers       Date:  2021-12-02       Impact factor: 52.329

2.  A network of core and subtype-specific gene expression programs in myositis.

Authors:  David R Amici; Iago Pinal-Fernandez; Lisa Christopher-Stine; Andrew L Mammen; Marc L Mendillo
Journal:  Acta Neuropathol       Date:  2021-09-09       Impact factor: 17.088

3.  Performance of the 2017 European Alliance of Associations for Rheumatology/American College of Rheumatology Classification Criteria for Idiopathic Inflammatory Myopathies in Patients With Myositis-Specific Autoantibodies.

Authors:  Maria Casal-Dominguez; Iago Pinal-Fernandez; Katherine Pak; Wilson Huang; Albert Selva-O'Callaghan; Jemima Albayda; Livia Casciola-Rosen; Julie J Paik; Eleni Tiniakou; Christopher A Mecoli; Thomas E Lloyd; Sonye K Danoff; Lisa Christopher-Stine; Andrew L Mammen
Journal:  Arthritis Rheumatol       Date:  2022-02-01       Impact factor: 15.483

4.  Apremilast in Recalcitrant Cutaneous Dermatomyositis: A Nonrandomized Controlled Trial.

Authors:  Carole Bitar; Thien Ninh; Katherine Brag; Soraya Foutouhi; Stella Radosta; Jade Meyers; Melody Baddoo; Delong Liu; Brittany Stumpf; Paul W Harms; Nakhle S Saba; Erin Boh
Journal:  JAMA Dermatol       Date:  2022-10-05       Impact factor: 11.816

5.  Skeletal muscle provides the immunological micro-milieu for specific plasma cells in anti-synthetase syndrome-associated myositis.

Authors:  Corinna Preuße; Barbara Paesler; Christopher Nelke; Derya Cengiz; Thomas Müntefering; Andreas Roos; Damien Amelin; Yves Allenbach; Akinori Uruha; Carsten Dittmayer; Andreas Hentschel; Marc Pawlitzki; Sarah Hoffmann; Sara Timm; Sarah Leonard Louis; Nora F Dengler; Heinz Wiendl; Jan D Lünemann; Albert Sickmann; Baptiste Hervier; Sven G Meuth; Udo Schneider; Anne Schänzer; Sabine Krause; Stylianos Tomaras; Eugen Feist; Rebecca Hasseli; Hans-Hilmar Goebel; Laure Gallay; Nathalie Streichenberger; Olivier Benveniste; Werner Stenzel; Tobias Ruck
Journal:  Acta Neuropathol       Date:  2022-05-25       Impact factor: 15.887

Review 6.  Updates on the Immunopathology in Idiopathic Inflammatory Myopathies.

Authors:  Akinori Uruha; Hans-Hilmar Goebel; Werner Stenzel
Journal:  Curr Rheumatol Rep       Date:  2021-07-01       Impact factor: 4.592

7.  Study of Tofacitinib in Refractory Dermatomyositis: An Open-Label Pilot Study of Ten Patients.

Authors:  Julie J Paik; Livia Casciola-Rosen; Joseph Yusup Shin; Jemima Albayda; Eleni Tiniakou; Doris G Leung; Laura Gutierrez-Alamillo; Jamie Perin; Liliana Florea; Corina Antonescu; Sherry G Leung; Grazyna Purwin; Andrew Koenig; Lisa Christopher-Stine
Journal:  Arthritis Rheumatol       Date:  2021-03-24       Impact factor: 10.995

8.  MicroRNA and mRNA profiling in the idiopathic inflammatory myopathies.

Authors:  Joanna E Parkes; Anastasia Thoma; Adam P Lightfoot; Philip J Day; Hector Chinoy; Janine A Lamb
Journal:  BMC Rheumatol       Date:  2020-06-10

Review 9.  The Role of Cutaneous Type I IFNs in Autoimmune and Autoinflammatory Diseases.

Authors:  Jessica L Turnier; J Michelle Kahlenberg
Journal:  J Immunol       Date:  2020-12-01       Impact factor: 5.422

10.  Distinct tissue injury patterns in juvenile dermatomyositis auto-antibody subgroups.

Authors:  Mailan Nguyen; Vy Do; Paul C Yell; Chanhee Jo; Jie Liu; Dennis K Burns; Tracey Wright; Chunyu Cai
Journal:  Acta Neuropathol Commun       Date:  2020-08-05       Impact factor: 7.801

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