Literature DB >> 31432211

Complete Genome Sequence of a Chlorobenzene Degrader, Pandoraea pnomenusa MCB032.

Hong-Jun Chao1,2, Yuan-Yuan Chen1, Jing Wu1, Da-Zhong Yan3, Ning-Yi Zhou2,4.   

Abstract

Chlorobenzenes are ubiquitously distributed, highly persistent, and toxic environmental contaminants. Pandoraea pnomenusa MCB032 was isolated as a new dominant chlorobenzene-utilizing strain from a functionally stable bioreactor during the treatment of chlorobenzenes when strain Burkholderia sp. JS150 disappeared. In study, we report the complete genome sequence of strain MCB032 which consists of a circular chromosome and three plasmids, which are ~ 6 Mb in length with 5450 open reading frames-12 encoding rRNAs and 77 encoding tRNAs. We further identified 17 putative genes encoding the enzymes involved in the methyl-accepting chemotaxis proteins in sensing chemical gradients during chemotaxis. The annotated complete genome sequence of this strain will provide genetic insights into the degradation of chlorinated aromatic compounds. The information will empower the elucidation of chlorobenzene affinity hierarchy and species succession in the bioreactor.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31432211     DOI: 10.1007/s00284-019-01760-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  11 in total

1.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

2.  Glimmer: multilevel MDS on the GPU.

Authors:  Stephen Ingram; Tamara Munzner; Marc Olano
Journal:  IEEE Trans Vis Comput Graph       Date:  2009 Mar-Apr       Impact factor: 4.579

3.  Strain stability in biological systems treating recalcitrant organic compounds.

Authors:  E A C Emanuelsson; I I R Baptista; A Mantalaris; A G Livingston
Journal:  Biotechnol Bioeng       Date:  2005-12-30       Impact factor: 4.530

4.  Bacterial chemotaxis towards aromatic hydrocarbons in Pseudomonas.

Authors:  Jesús Lacal; Francisco Muñoz-Martínez; José-Antonio Reyes-Darías; Estrella Duque; Miguel Matilla; Ana Segura; José-J Ortega Calvo; Celía Jímenez-Sánchez; Tino Krell; Juan L Ramos
Journal:  Environ Microbiol       Date:  2011-05-23       Impact factor: 5.491

5.  Biodegradation of mixtures of substituted benzenes by Pseudomonas sp. strain JS150.

Authors:  B E Haigler; C A Pettigrew; J C Spain
Journal:  Appl Environ Microbiol       Date:  1992-07       Impact factor: 4.792

6.  Responses of Pseudomonas putida to toxic aromatic carbon sources.

Authors:  Tino Krell; Jesús Lacal; M Eugenia Guazzaroni; Andreas Busch; Hortencia Silva-Jiménez; Sandy Fillet; José A Reyes-Darías; Francisco Muñoz-Martínez; Miriam Rico-Jiménez; Cristina García-Fontana; Estrella Duque; Ana Segura; Juan-Luis Ramos
Journal:  J Biotechnol       Date:  2012-02-01       Impact factor: 3.307

7.  Bioscrubbing of waste gas-substrate absorber to avoid instability induced by inhibition kinetics.

Authors:  Teresa A C Oliveira; Andrew G Livingston
Journal:  Biotechnol Bioeng       Date:  2003-12-05       Impact factor: 4.530

8.  Genetic and biochemical analyses of chlorobenzene degradation gene clusters in Pandoraea sp. strain MCB032.

Authors:  Xi-Wen Jiang; Hong Liu; Ying Xu; Shu-Jun Wang; David J Leak; Ning-Yi Zhou
Journal:  Arch Microbiol       Date:  2009-04-14       Impact factor: 2.552

9.  Evidence of species succession during chlorobenzene biodegradation.

Authors:  I I R Baptista; N Y Zhou; E A C Emanuelsson; L G Peeva; D J Leak; A Mantalaris; A G Livingston
Journal:  Biotechnol Bioeng       Date:  2008-01-01       Impact factor: 4.530

10.  The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

Authors:  Ross Overbeek; Robert Olson; Gordon D Pusch; Gary J Olsen; James J Davis; Terry Disz; Robert A Edwards; Svetlana Gerdes; Bruce Parrello; Maulik Shukla; Veronika Vonstein; Alice R Wattam; Fangfang Xia; Rick Stevens
Journal:  Nucleic Acids Res       Date:  2013-11-29       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.