| Literature DB >> 31429852 |
Maira Trancozo1,2, Marcos V D Moraes1,2, Dalila A Silva1,2, Jéssica A M Soares1, Clara Barbirato1, Márcio G Almeida1, Lígia R Santos1,2, Maria R G O Rebouças3, Akel N Akel3, Valentim Sipolatti3, Vanda R R Nunes3, Flavia I V Errera2,4, Meire Aguena5, Maria R Passos-Bueno5, Flavia de Paula1,2.
Abstract
Osteogenesis Imperfecta (OI) is a heterogeneous genetic disorder characterized by bone fragility and fracture. Mutations in 20 distinct genes can cause OI, and therefore, the genetic diagnosis of OI is frequently difficult to obtain because of the great number of genes that can be related with this disease. Studies that report the most frequently mutated genes in OI patients can help to improve molecular strategies for diagnosis of the disease. In order to characterize the mutation profile of OI in Brazilian patients, we analyzed 30 unrelated patients through SSCP screening, NGS gene panel, and/or Sanger sequencing for the 11 most frequently mutated genes in the database of mutations, including COL1A1, COL1A2, P3H1, CRTAP, PPIB, SERPINH1, SERPINF1, FKBP10, SP7, WNT1 and IFITM5. Disease-causing variants were identified in COL1A1, COL1A2, FKBP10, P3H1, and IFITM5. A total of 28 distinct mutations were identified, including seven novel changes. Our data show that the analysis of these five genes is able to detect at least 95% of causative mutations in OI disorder from Brazilian population. However, it has to be taken into considerations that distinct populations can have different frequencies of disease-causing variants. Hence, it is important to replicate this study in other groups.Entities:
Year: 2019 PMID: 31429852 PMCID: PMC6726155 DOI: 10.1590/1678-4685-GMB-2018-0043
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Genetic variations found in Osteogenesis Imperfecta patients.
| Patient | Gene | Exon/Intron | Mutation (cDNA) | Mutation (protein) | Mutation type | Zygosity | OI phenotype | Familial | Novel | Mutation detection technique | OI type |
|---|---|---|---|---|---|---|---|---|---|---|---|
| P.1 |
| Exon 8 | c.608G > T | p.Gly203Val | Missense | Heterozygous | severe | No | No | NGS | III |
| P.2 |
| Exon 13 | c.887G > T | p.Gly296Val | Missense | Heterozygous | mild | Yes | Yes | NGS | I |
| P.3 |
| Intron 16 | c.1056+1G > A | Splice Site | Splicing | Heterozygous | moderate | No | No | SSCP | IV |
| P.4 |
| Exon 17 | c.1138G > T | p.Gly380Cys | Missense | Heterozygous | mild | Yes | No | SSCP | I |
| P.5 |
| Exon 18 | c.1165G > T | p.Gly389Cys | Missense | Heterozygous | moderate | No | No | NGS | IV |
| P.6 |
| Intron 27 | c.1875+1G > C | Splice Site | Splicing | Heterozygous | severe | No | No | SSCP | III |
| P.7 |
| Exon 32 | c.2165G > C | p.Gly722Ala | Missense | Heterozygous | mild | No | Yes | NGS | I |
| P.8 |
| Exon 37 | c.2523delT | p.(Gly842Alafs*266) | Frameshift | Heterozygous | mild | Yes | No | NGS | I |
| P.9 |
| Intron 37 | c.2559+1G > A | Splice Site | Splicing | Heterozygous | mild | Yes | No | SSCP | I |
| P.10 |
| Exon 40 | c.2750delG | p.(Gly917Aspfs*191) | Frameshift | Heterozygous | severe | Yes | Yes | SSCP | III |
| P.11 |
| Exon 44 | c.3162delT | p.(Gly1055Alafs*53) | Frameshift | Heterozygous | mild | N/A | No | NGS | I |
| P.12 |
| Exon 45 | c.3235G > A | p.Gly1079Ser | Missense | Heterozygous | mild | Yes | No | SSCP | I |
| P.13 |
| Exon 45 | c.3235G > A | p.Gly1079Ser | Missense | Heterozygous | mild | Yes | No | NGS | I |
| P.14 |
| Exon 45 | c.3239delC | p.(Pro1080Leufs*28) | Frameshift | Heterozygous | severe | No | Yes | SSCP | III |
| P.15 |
| Intron 14 | c.693+2T > C | Splice Site | Splicing | Heterozygous | moderate | No | No | NGS | IV |
| P.16 |
| Exon 16 | c.739G > C | p.Gly247Arg | Missense | Heterozygous | moderate | No | No | SSCP | IV |
| P.17 |
| Exon 34 | c.2027G > A | p.Gly676Asp | Missense | Heterozygous | mild | No | No | NGS | I |
| P.18 |
| Exon 38 | c.2314G > A | p.Gly772Ser | Missense | Heterozygous | mild | No | No | NGS | I |
| P.19 |
| Exon 38 | c.2314G > A | p.Gly772Ser | Missense | Heterozygous | mild | Yes | No | NGS | I |
| P.20 |
| Intron 40 | c.2565+1G > A | Splice Site | Splicing | Heterozygous | moderate | No | No | NGS | IV |
| P.21 |
| Exon 40 | c.2458G > A | p.Gly820Ser | Missense | Heterozygous | severe | No | No | NGS | III |
| P.22 |
| Exon 49 | c.3278G > A | p.Gly1093Asp | Missense | Heterozygous | severe | No | No | NGS | III |
| P.23 |
| Exon 49 | c.3296G > C | p.Gly1099Ala | Missense | Heterozygous | severe | No | Yes | NGS | III |
| P.24 |
| 5`UTR | c.-14C > T | p.Met1ext-5 | Start Codon | Heterozygous | severe | No | No | Sanger S | V |
| P.25 |
| Intron 5 | c.1080+1G > T | Splice Site | Splicing | Homozygous | severe | No | No | SSCP | VIII |
| P.26 |
| Exon 14 | c.2024G > T | p.Trp675Leu | Missense | Heterozygous | severe | Yes | No | SSCP/NGS | VIII |
| P.27 |
| Exon 1 | c.21dupC | p.Ser8Glnfs*67 | Frameshift | Homozygous | moderate | No | No | NGS | XI |
| P.28 |
| Exon 1 | c.179A > C | p.Gln60Pro | Missense | Heterozygous | moderate | No | Yes | NGS | XI |
| Intron 6 | c.1063+2T > C | Splice Site | Splicing | Heterozygous | |||||||
| P.29 |
| Exon 5 | c.831dupC | p.Gly278Argfs*95 | Frameshift | Homozygous | severe | No | No | SSCP | XI |
| P.30 | - | - | - | - | - | - | mild | No | - | - | - |