Literature DB >> 31425729

Combinatorial role of two G-quadruplexes in 5' UTR of transforming growth factor β2 (TGFβ2).

Prachi Agarwala1, Satyaprakash Pandey1, Mary Krishna Ekka1, Debojyoti Chakraborty1, Souvik Maiti2.   

Abstract

Albeit most studies demonstrate the inhibitory role of G-quadruplex in the 5' Untranslated Region (5' UTR), our previous report depicted its completely contrasting activating role in the 5' UTR of transforming growth factor β2 (TGFβ2) mRNA. Therefore, we screened the 5' UTR of TGFβ2 manually and identified a second putative G-quadruplex sequence. Our in vitro experiments encompassing CD and UV spectroscopy confirmed the ability of this sequence to form a G-quadruplex and in cellulo studies further indicated its activating role in modulation of TGFβ2 gene expression. Our study suggests that these two 5' UTR G-quadruplexes most probably operate additively to substantially increase gene expression of TGFβ2. Neither of the two G-quadruplex alone is sufficient enough to drastically augment protein production. Both G-quadruplexes are essential for increasing protein output. To the best of our knowledge, our study is the first report showcasing the combinatorial role of two G-quadruplexes in the 5' UTR of an mRNA.
Copyright © 2019. Published by Elsevier B.V.

Entities:  

Keywords:  G-quadruplex; Mutations; RNA; Structure; TGFβ2

Mesh:

Substances:

Year:  2019        PMID: 31425729     DOI: 10.1016/j.bbagen.2019.129416

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gen Subj        ISSN: 0304-4165            Impact factor:   3.770


  4 in total

1.  Non-duplex G-Quadruplex DNA Structure: A Developing Story from Predicted Sequences to DNA Structure-Dependent Epigenetics and Beyond.

Authors:  Antara Sengupta; Shuvra Shekhar Roy; Shantanu Chowdhury
Journal:  Acc Chem Res       Date:  2020-12-21       Impact factor: 22.384

Review 2.  Interaction between non-coding RNAs, mRNAs and G-quadruplexes.

Authors:  Soudeh Ghafouri-Fard; Atefe Abak; Aria Baniahmad; Bashdar Mahmud Hussen; Mohammad Taheri; Elena Jamali; Marcel E Dinger
Journal:  Cancer Cell Int       Date:  2022-04-29       Impact factor: 6.429

3.  Axl Expression in Renal Mesangial Cells Is Regulated by Sp1, Ap1, MZF1, and Ep300, and the IL-6/miR-34a Pathway.

Authors:  David E Adams; Yuxuan Zhen; Xiaoyang Qi; Wen-Hai Shao
Journal:  Cells       Date:  2022-06-09       Impact factor: 7.666

Review 4.  Epigenetic Modulation of Chromatin States and Gene Expression by G-Quadruplex Structures.

Authors:  Chiara Reina; Vincenzo Cavalieri
Journal:  Int J Mol Sci       Date:  2020-06-11       Impact factor: 5.923

  4 in total

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