| Literature DB >> 31423653 |
Abstract
KEGG is a reference knowledge base for biological interpretation of large-scale molecular datasets, such as genome and metagenome sequences. It accumulates experimental knowledge about high-level functions of the cell and the organism represented in terms of KEGG molecular networks, including KEGG pathway maps, BRITE hierarchies, and KEGG modules. By the process called KEGG mapping, a set of protein coding genes in the genome, for example, can be converted to KEGG molecular networks enabling interpretation of cellular functions and other high-level features. Here we report a new version of KEGG Mapper, a suite of KEGG mapping tools available at the KEGG website (https://www.kegg.jp/ or https://www.genome.jp/kegg/), together with the KOALA family tools for automatic assignment of KO (KEGG Orthology) identifiers used in the mapping.Entities:
Keywords: KEGG; KEGG Mapper; KEGG Orthology; KEGG module; genome annotation; pathway analysis
Mesh:
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Year: 2019 PMID: 31423653 PMCID: PMC6933857 DOI: 10.1002/pro.3711
Source DB: PubMed Journal: Protein Sci ISSN: 0961-8368 Impact factor: 6.725