Literature DB >> 31421969

Genetic Circuit-Assisted Smart Microbial Engineering.

Cong Gao1, Peng Xu2, Chao Ye1, Xiulai Chen1, Liming Liu3.   

Abstract

Rapid advances in DNA synthesis, genetic manipulation, and biosensors have greatly improved the ability to engineer microorganisms with complex functions. By accurately integrating quality biosensors and complex genetic circuits, recently emerged smart microorganisms have enabled exciting opportunities for dissecting complex signaling networks and making responses without artificial intervention. However, because of the lack of design principles, developing such smart microorganisms remains challenging. In this review, we propose the concept of smart microbial engineering (SME) and describe the general features of basic SME, including the circuit architecture, components, and design process. We also summarize the latest SME achievements, remaining challenges, and potential solutions in this growing field.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Keywords:  applications; genetic circuits; metabolic engineering; microbial engineering; synthetic biology

Mesh:

Year:  2019        PMID: 31421969     DOI: 10.1016/j.tim.2019.07.005

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  12 in total

Review 1.  Recent advances of pH homeostasis mechanisms in Corynebacterium glutamicum.

Authors:  Jing Guo; Zhenping Ma; Jinshan Gao; Jinhua Zhao; Liang Wei; Jun Liu; Ning Xu
Journal:  World J Microbiol Biotechnol       Date:  2019-11-26       Impact factor: 3.312

Review 2.  Understanding D-xylonic acid accumulation: a cornerstone for better metabolic engineering approaches.

Authors:  Angelo B Bañares; Grace M Nisola; Kris Niño G Valdehuesa; Won-Keun Lee; Wook-Jin Chung
Journal:  Appl Microbiol Biotechnol       Date:  2021-07-03       Impact factor: 4.813

3.  Dynamic control of the distribution of carbon flux between cell growth and butyrate biosynthesis in Escherichia coli.

Authors:  Liang Guo; Jiaxin Lu; Cong Gao; Linpei Zhang; Liming Liu; Xiulai Chen
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-11       Impact factor: 4.813

4.  Extended Metabolic Biosensor Design for Dynamic Pathway Regulation of Cell Factories.

Authors:  Yadira Boada; Alejandro Vignoni; Jesús Picó; Pablo Carbonell
Journal:  iScience       Date:  2020-06-23

5.  Branch point control at malonyl-CoA node: A computational framework to uncover the design principles of an ideal genetic-metabolic switch.

Authors:  Peng Xu
Journal:  Metab Eng Commun       Date:  2020-04-24

6.  Engineered Living Materials Based on Adhesin-Mediated Trapping of Programmable Cells.

Authors:  Shuaiqi Guo; Emilien Dubuc; Yahav Rave; Mick Verhagen; Simone A E Twisk; Tim van der Hek; Guido J M Oerlemans; Maxime C M van den Oetelaar; Laura S van Hazendonk; Mariska Brüls; Bruno V Eijkens; Pim L Joostens; Sander R Keij; Weizhou Xing; Martijn Nijs; Jitske Stalpers; Manoj Sharma; Marieke Gerth; Roy J E A Boonen; Kees Verduin; Maarten Merkx; Ilja K Voets; Tom F A de Greef
Journal:  ACS Synth Biol       Date:  2020-03-03       Impact factor: 5.110

7.  Reprogramming microbial populations using a programmed lysis system to improve chemical production.

Authors:  Wenwen Diao; Liang Guo; Qiang Ding; Cong Gao; Guipeng Hu; Xiulai Chen; Yang Li; Linpei Zhang; Wei Chen; Jian Chen; Liming Liu
Journal:  Nat Commun       Date:  2021-11-25       Impact factor: 14.919

8.  Enhancing biofuels production by engineering the actin cytoskeleton in Saccharomyces cerevisiae.

Authors:  Hui Liu; Pei Zhou; Mengya Qi; Liang Guo; Cong Gao; Guipeng Hu; Wei Song; Jing Wu; Xiulai Chen; Jian Chen; Wei Chen; Liming Liu
Journal:  Nat Commun       Date:  2022-04-07       Impact factor: 17.694

9.  Auxotrophic Selection Strategy for Improved Production of Coenzyme B12 in Escherichia coli.

Authors:  Myung Hyun Noh; Hyun Gyu Lim; Daeyeong Moon; Sunghoon Park; Gyoo Yeol Jung
Journal:  iScience       Date:  2020-02-07

Review 10.  Multiplex Genome Engineering Methods for Yeast Cell Factory Development.

Authors:  Koray Malcı; Laura E Walls; Leonardo Rios-Solis
Journal:  Front Bioeng Biotechnol       Date:  2020-10-29
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