Literature DB >> 31421630

Hitting on the move: Targeting intrinsically disordered protein states of the MDM2-p53 interaction.

Constantinos G Neochoritis1, Jack Atmaj2, Aleksandra Twarda-Clapa3, Ewa Surmiak3, Lukasz Skalniak3, Lisa-Maria Köhler4, Damian Muszak3, Katarzyna Kurpiewska3, Justyna Kalinowska-Tłuścik3, Barbara Beck4, Tad A Holak3, Alexander Dömling5.   

Abstract

Intrinsically disordered proteins are an emerging class of proteins without a folded structure and currently disorder-based drug targeting remains a challenge. p53 is the principal regulator of cell division and growth whereas MDM2 consists its main negative regulator. The MDM2-p53 recognition is a dynamic and multistage process that amongst other, employs the dissociation of a transient α-helical N-terminal ''lid'' segment of MDM2 from the proximity of the p53-complementary interface. Several small molecule inhibitors have been reported to inhibit the formation of the p53-MDM2 complex with the vast majority mimicking the p53 residues Phe19, Trp23 and Leu26. Recently, we have described the transit from the 3-point to 4-point pharmacophore model stabilizing this intrinsically disordered N-terminus by increasing the binding affinity by a factor of 3. Therefore, we performed a thorough SAR analysis, including chiral separation of key compound which was evaluated by FP and 2D NMR. Finally, p53-specific anti-cancer activity towards p53-wild-type cancer cells was observed for several representative compounds.
Copyright © 2019 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  (1)H–(15)N 2D HSQC NMR; 4-Point pharmacophore model; AnchorQuery; Cancer; Intrinsically disordered proteins; SAR analysis; Ugi reaction; p53-MDM2

Mesh:

Substances:

Year:  2019        PMID: 31421630      PMCID: PMC7008132          DOI: 10.1016/j.ejmech.2019.111588

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  61 in total

1.  Local structural elements in the mostly unstructured transcriptional activation domain of human p53.

Authors:  H Lee; K H Mok; R Muhandiram; K H Park; J E Suk; D H Kim; J Chang; Y C Sung; K Y Choi; K H Han
Journal:  J Biol Chem       Date:  2000-09-22       Impact factor: 5.157

2.  The way to NMR structures of proteins.

Authors:  K Wüthrich
Journal:  Nat Struct Biol       Date:  2001-11

3.  Quantitative lid dynamics of MDM2 reveals differential ligand binding modes of the p53-binding cleft.

Authors:  Scott A Showalter; Lei Bruschweiler-Li; Eric Johnson; Fengli Zhang; Rafael Brüschweiler
Journal:  J Am Chem Soc       Date:  2008-04-25       Impact factor: 15.419

4.  Mapping of the p53 and mdm-2 interaction domains.

Authors:  J Chen; V Marechal; A J Levine
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

5.  Rational design and synthesis of 1,5-disubstituted tetrazoles as potent inhibitors of the MDM2-p53 interaction.

Authors:  Ewa Surmiak; Constantinos G Neochoritis; Bogdan Musielak; Aleksandra Twarda-Clapa; Katarzyna Kurpiewska; Grzegorz Dubin; Carlos Camacho; Tad A Holak; Alexander Dömling
Journal:  Eur J Med Chem       Date:  2016-11-16       Impact factor: 6.514

6.  Innovation in the pharmaceutical industry: New estimates of R&D costs.

Authors:  Joseph A DiMasi; Henry G Grabowski; Ronald W Hansen
Journal:  J Health Econ       Date:  2016-02-12       Impact factor: 3.883

7.  Ordering of the N-terminus of human MDM2 by small molecule inhibitors.

Authors:  Klaus Michelsen; John B Jordan; Jeffrey Lewis; Alexander M Long; Evelyn Yang; Yosup Rew; Jing Zhou; Peter Yakowec; Paul D Schnier; Xin Huang; Leszek Poppe
Journal:  J Am Chem Soc       Date:  2012-10-05       Impact factor: 15.419

8.  Structures of low molecular weight inhibitors bound to MDMX and MDM2 reveal new approaches for p53-MDMX/MDM2 antagonist drug discovery.

Authors:  Grzegorz M Popowicz; Anna Czarna; Siglinde Wolf; Kan Wang; Wei Wang; Alexander Dömling; Tad A Holak
Journal:  Cell Cycle       Date:  2010-03-15       Impact factor: 4.534

9.  Enabling large-scale design, synthesis and validation of small molecule protein-protein antagonists.

Authors:  David Koes; Kareem Khoury; Yijun Huang; Wei Wang; Michal Bista; Grzegorz M Popowicz; Siglinde Wolf; Tad A Holak; Alexander Dömling; Carlos J Camacho
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240

10.  Targeting the intrinsically disordered structural ensemble of α-synuclein by small molecules as a potential therapeutic strategy for Parkinson's disease.

Authors:  Gergely Tóth; Shyra J Gardai; Wagner Zago; Carlos W Bertoncini; Nunilo Cremades; Susan L Roy; Mitali A Tambe; Jean-Christophe Rochet; Celine Galvagnion; Gaia Skibinski; Steven Finkbeiner; Michael Bova; Karin Regnstrom; San-San Chiou; Jennifer Johnston; Kari Callaway; John P Anderson; Michael F Jobling; Alexander K Buell; Ted A Yednock; Tuomas P J Knowles; Michele Vendruscolo; John Christodoulou; Christopher M Dobson; Dale Schenk; Lisa McConlogue
Journal:  PLoS One       Date:  2014-02-14       Impact factor: 3.240

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  5 in total

Review 1.  Therapeutic opportunities in cancer therapy: targeting the p53-MDM2/MDMX interactions.

Authors:  Murali Munisamy; Nayonika Mukherjee; Levin Thomas; Amy Trinh Pham; Arash Shakeri; Yusheng Zhao; Jill Kolesar; Praveen P N Rao; Vivek M Rangnekar; Mahadev Rao
Journal:  Am J Cancer Res       Date:  2021-12-15       Impact factor: 6.166

2.  Development of MDM2 degraders based on ligands derived from Ugi reactions: Lessons and discoveries.

Authors:  Bo Wang; Jin Liu; Ira Tandon; Suzhen Wu; Peng Teng; Jianhua Liao; Weiping Tang
Journal:  Eur J Med Chem       Date:  2021-04-04       Impact factor: 7.088

3.  Roles of DANCR/microRNA-518a-3p/MDMA ceRNA network in the growth and malignant behaviors of colon cancer cells.

Authors:  Yi Sun; Bin Cao; Jingzhen Zhou
Journal:  BMC Cancer       Date:  2020-05-18       Impact factor: 4.430

4.  Optimized Inhibitors of MDM2 via an Attempted Protein-Templated Reductive Amination.

Authors:  Ramon van der Vlag; M Yagiz Unver; Tommaso Felicetti; Aleksandra Twarda-Clapa; Fatima Kassim; Cagdas Ermis; Constantinos G Neochoritis; Bogdan Musielak; Beata Labuzek; Alexander Dömling; Tad A Holak; Anna K H Hirsch
Journal:  ChemMedChem       Date:  2019-12-12       Impact factor: 3.466

Review 5.  Resistance mechanisms to inhibitors of p53-MDM2 interactions in cancer therapy: can we overcome them?

Authors:  Lucia Haronikova; Ondrej Bonczek; Pavlina Zatloukalova; Filip Kokas-Zavadil; Martina Kucerikova; Philip J Coates; Robin Fahraeus; Borivoj Vojtesek
Journal:  Cell Mol Biol Lett       Date:  2021-12-15       Impact factor: 5.787

  5 in total

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