Literature DB >> 31418574

Unraveling the Role of Hydroxyproline in Maintaining the Thermal Stability of the Collagen Triple Helix Structure Using Simulation.

Songcheng Xu, Min Gu, Kun Wu1, Guoying Li.   

Abstract

The thermal stability of collagen has an important effect on its practical applications. Many believe that hydroxyproline (Hyp) improves the structural stability of collagen molecules. In this study, for the first time, a method of building natural collagen molecular models was described. We constructed a collagen model with typical triple-helix structure and calculated the hydrogen bond energy between collagen α chains. The calculated hydrogen bond energy was consistent with the experimental results of differential scanning calorimetry. After the calculation simulation, we verified that the hydrogen bond energy between collagen chains was positively correlated with Hyp content in the models and an increased Hyp content in the model was beneficial in improving the thermal resistance of the structure. In addition, we found that thermal unfolding did not occur simultaneously along the entire molecule but started in the regions with less Hyp content. This study provides a collagen model with a natural collagen amino acid sequence, which will be helpful for further investigation of the physical and chemical properties of natural collagen.

Entities:  

Mesh:

Substances:

Year:  2019        PMID: 31418574     DOI: 10.1021/acs.jpcb.9b05006

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  8 in total

1.  Engineering microparticles based on solidified stem cell secretome with an augmented pro-angiogenic factor portfolio for therapeutic angiogenesis.

Authors:  Thomas Später; Marisa Assunção; Kwok Keung Lit; Guidong Gong; Xiaoling Wang; Yi-Yun Chen; Ying Rao; Yucong Li; Chi Him Kendrick Yiu; Matthias W Laschke; Michael D Menger; Dan Wang; Rocky S Tuan; Kay-Hooi Khoo; Michael Raghunath; Junling Guo; Anna Blocki
Journal:  Bioact Mater       Date:  2022-04-02

2.  ColGen: An end-to-end deep learning model to predict thermal stability of de novo collagen sequences.

Authors:  Chi-Hua Yu; Eesha Khare; Om Prakash Narayan; Rachael Parker; David L Kaplan; Markus J Buehler
Journal:  J Mech Behav Biomed Mater       Date:  2021-10-31

3.  Hindlimb unloading induces time-dependent disruption of testicular histology in mice.

Authors:  Asima Karim; Rizwan Qaisar; Muhammad Azeem; Josemin Jose; Gopika Ramachandran; Zeinab Mohamed Ibrahim; Adel Elmoselhi; Firdos Ahmad; Wael M Abdel-Rahman; Anu V Ranade
Journal:  Sci Rep       Date:  2022-10-18       Impact factor: 4.996

4.  Mapping the metabolomic and lipidomic changes in the bleomycin model of pulmonary fibrosis in young and aged mice.

Authors:  Jelena Weckerle; Sergio Picart-Armada; Stephan Klee; Tom Bretschneider; Andreas H Luippold; Wolfgang Rist; Christian Haslinger; Holger Schlüter; Matthew J Thomas; Bartlomiej Krawczyk; Francesc Fernandez-Albert; Marc Kästle; Daniel Veyel
Journal:  Dis Model Mech       Date:  2022-01-25       Impact factor: 5.758

5.  Characterization of Collagen from Three Genetic Lines (Gray, Red and F1) of Oreochromis niloticus (Tilapia) Skin in Young and Old Adults.

Authors:  Nataly Reátegui-Pinedo; David Salirrosas; Linda Sánchez-Tuesta; Claudio Quiñones; Segundo R Jáuregui-Rosas; Gabriela Barraza; Angelita Cabrera; Carmen Ayala-Jara; Renata Miliani Martinez; André Rolim Baby; Zulita Adriana Prieto
Journal:  Molecules       Date:  2022-02-08       Impact factor: 4.411

6.  Effect of High Pressure/Heating Combination on the Structure and Texture of Chinese Traditional Pig Trotter Stewed with Soy Sauce.

Authors:  Ying Wang; Yanan Sheng; Yuemei Zhang; Fang Geng; Jinxuan Cao
Journal:  Foods       Date:  2022-07-28

7.  Integrative metabolomic and proteomic signatures define clinical outcomes in severe COVID-19.

Authors:  Mustafa Buyukozkan; Sergio Alvarez-Mulett; Alexandra C Racanelli; Frank Schmidt; Richa Batra; Katherine L Hoffman; Hina Sarwath; Rudolf Engelke; Luis Gomez-Escobar; Will Simmons; Elisa Benedetti; Kelsey Chetnik; Guoan Zhang; Edward Schenck; Karsten Suhre; Justin J Choi; Zhen Zhao; Sabrina Racine-Brzostek; He S Yang; Mary E Choi; Augustine M K Choi; Soo Jung Cho; Jan Krumsiek
Journal:  iScience       Date:  2022-06-17

Review 8.  Hydroxyproline in animal metabolism, nutrition, and cell signaling.

Authors:  Shengdi Hu; Wenliang He; Guoyao Wu
Journal:  Amino Acids       Date:  2021-08-03       Impact factor: 3.520

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.