Literature DB >> 31418274

Cyclic Tetrapeptides from Nature and Design: A Review of Synthetic Methodologies, Structure, and Function.

Vijayalekshmi Sarojini1,2, Alan J Cameron1, Kyriakos G Varnava1, William A Denny, Gangadhar Sanjayan3.   

Abstract

Small cyclic peptides possess a wide range of biological properties and unique structures that make them attractive to scientists working in a range of areas from medicinal to materials chemistry. However, cyclic tetrapeptides (CTPs), which are important members of this family, are notoriously difficult to synthesize. Various synthetic methodologies have been developed that enable access to natural product CTPs and their rationally designed synthetic analogues having novel molecular structures. These methodologies include the use of reversible protecting groups such as pseudoprolines that restrict conformational freedom, ring contraction strategies, on-resin cyclization approaches, and optimization of coupling reagents and reaction conditions such as temperature and dilution factors. Several fundamental studies have documented the impacts of amino acid configurations, N-alkylation, and steric bulk on both synthetic success and ensuing conformations. Carefully executed retrosynthetic ring dissection and the unique structural features of the linear precursor sequences that result from the ring dissection are crucial for the success of the cyclization step. Other factors that influence the outcome of the cyclization step include reaction temperature, solvent, reagents used as well as dilution levels. The purpose of this review is to highlight the current state of affairs on naturally occurring and rationally designed cyclic tetrapeptides, including strategies investigated for their syntheses in the literature, the conformations adopted by these molecules, and specific examples of their function. Using selected examples from the literature, an in-depth discussion of the synthetic techniques and reaction parameters applied for the successful syntheses of 12-, 13-, and 14-membered natural product CTPs and their novel analogues are presented, with particular focus on the cyclization step. Selected examples of the three-dimensional structures of cyclic tetrapeptides studied by NMR, and X-ray crystallography are also included.

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Year:  2019        PMID: 31418274     DOI: 10.1021/acs.chemrev.8b00737

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  7 in total

1.  Peptide cyclisation promoted by supramolecular complex formation.

Authors:  Arnout P T Hartendorp; Felix J de Zwart; Hans Bieräugel; Bas de Bruin; Joost N H Reek; Jan H van Maarseveen
Journal:  Org Biomol Chem       Date:  2022-01-19       Impact factor: 3.876

2.  Cyclic Tetrapeptides with Synergistic Antifungal Activity from the Fungus Aspergillus westerdijkiae Using LC-MS/MS-Based Molecular Networking.

Authors:  Junjie Han; Hanying Wang; Rui Zhang; Huanqin Dai; Baosong Chen; Tao Wang; Jingzu Sun; Wenzhao Wang; Fuhang Song; Erwei Li; Zhitang Lyu; Hongwei Liu
Journal:  Antibiotics (Basel)       Date:  2022-01-27

3.  PenA, a penicillin-binding protein-type thioesterase specialized for small peptide cyclization.

Authors:  Kenichi Matsuda; Kei Fujita; Toshiyuki Wakimoto
Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

Review 4.  Novel Methodologies for Chemical Activation in Organic Synthesis under Solvent-Free Reaction Conditions.

Authors:  Claudia Gabriela Avila-Ortiz; Eusebio Juaristi
Journal:  Molecules       Date:  2020-08-06       Impact factor: 4.411

Review 5.  Marine-Derived Secondary Metabolites as Promising Epigenetic Bio-Compounds for Anticancer Therapy.

Authors:  Mariarosaria Conte; Elisabetta Fontana; Angela Nebbioso; Lucia Altucci
Journal:  Mar Drugs       Date:  2020-12-31       Impact factor: 5.118

Review 6.  Natural Peptides Inducing Cancer Cell Death: Mechanisms and Properties of Specific Candidates for Cancer Therapeutics.

Authors:  Plinio A Trinidad-Calderón; Carlos Daniel Varela-Chinchilla; Silverio García-Lara
Journal:  Molecules       Date:  2021-12-09       Impact factor: 4.411

7.  Crossing of the Cystic Barriers of Toxoplasma gondii by the Fluorescent Coumarin Tetra-Cyclopeptide.

Authors:  Céline Dard; Baptiste Leforestier; Flaviane Francisco Hilário; Mohamed Dit Mady Traoré; Marie-Ange Lespinasse; Basile Pérès; Marie-Carmen Molina; Rossimiriam Pereira de Freitas; Anne Milet; Danièle Maubon; Yung-Sing Wong
Journal:  Molecules       Date:  2021-12-11       Impact factor: 4.411

  7 in total

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