| Literature DB >> 31417807 |
Suchada Chantrapromma1, Huey Chong Kwong2, Patcharawadee Prachumrat1, Thawanrat Kobkeatthawin1, Tze Shyang Chia3, Ching Kheng Quah3.
Abstract
In the title benzohydrazide derivative, C14Entities:
Keywords: antioxidant; crystal structure; hydrazide; molecular conformation; α-glucosidase inhibitory
Year: 2019 PMID: 31417807 PMCID: PMC6690444 DOI: 10.1107/S2056989019010442
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound with the atom-labelling scheme and displacement ellipsoids at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.80 (2) | 1.92 (2) | 2.7203 (15) | 171 (2) |
| O3—H1 | 0.88 (2) | 2.17 (2) | 3.0276 (13) | 163 (2) |
| O4—H1 | 0.82 (2) | 1.93 (2) | 2.7379 (16) | 166 (2) |
| N1—H1 | 0.87 (2) | 2.24 (2) | 3.0017 (16) | 146.1 (19) |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2(a) A partial packing diagram of the title compound, showing a two-dimensional plate formed by O—H⋯O and N—H⋯O hydrogen bonds (cyan dotted lines). [Symmetry codes: (i) x, −y + , z + ; (iii) x − 1, y, z − 1.] (b) A partial packing diagram of the title compound with additional O—H⋯O hydrogen bonds (magenta dotted lines). [Symmetry code: (ii) −x + 1, −y + 1, −z.] Hydrogen atoms not involved in with these interactions are omitted for clarity.
Figure 3A view of dimers with (a) (18) and (b) (20) ring motifs. [Symmetry codes: (i) x, −y + , z + ; (ii) −x + 1, −y + 1, −z.]
Figure 4General chemical diagram, showing torsion angles τ 1, τ 2, τ 3 and τ 4 in the benzylidene-4-hydroxybenzohydrazide derivative.
Selected torsion angles (°) and the dihedral angle (°) between the terminal benzene rings
| Compound |
|
|
|
|
| Dihedral angle |
|---|---|---|---|---|---|---|
| Planar | ||||||
| (I) | 3,4-dihydroxyphenyl | −1.2 | −177.3 | −175.0 | −0.8 | 9.2 |
| ABALIA (Fun | 3-hydroxy-4-methoxyphenyl | 3.2 | 178.4 | 170.1 | −14.2 | 24.2 |
| CECZOB (Subashini | 4-chlorophenyl | 26.1 | −174.4 | 166.6 | −8.9 | 5.8 |
| CECZUH (Subashini | 4-bromophenyl | 25.6 | −174.9 | 169.0 | −7.2 | 9.8 |
| ESOTUD (Chantrapromma | 3-methoxyphenyl | −19.4, 20.7 | −173.5, −177.8 | −175.7, −173.0 | 1.2, 0.6 | 24.0, 29.3 |
| HOZBII (Li & Ban, 2009 | 4-nitrophenyl | 2.0 | 177.7 | 178.3 | −0.6 | 2.5 |
| IJUKEE (Zhang, 2011 | 4-hydroxy-3-nitrophenyl | −7.2 | −177.0 | −179.3 | 6.0 | 5.5 |
| IRAXEF (Sánchez-Lozano | 2,4-dihydroxyphenyl | −7.7 | −177.8 | −177.2 | −4.1 | 6.9 |
| MOZPEX (Ren, 2009 | 3,5-dichloro-2-hydroxyphenyl | 12.3 | 178.7 | −179.4 | −7.3 | 5.1 |
| ROFMOP (Xue | 3-bromo-5-chloro-2-hydroxyphenyl | −2.3 | 175.9 | −176.5 | −1.3 | 3.0 |
| TEWLAL (Ayyannan | 5-bromo-2-hydroxyphenyl | −15.7 | −173.6 | 168.9 | 3.1 | 27.0 |
| WACVON (Shalash | 4-hydroxy-3-methoxyphenyl | −34.2 | −175.5 | 174.7 | 15.4 | 28.6 |
| WACXOP (Huang, 2010 | 2,4-dichlorophenyl | −14.3 | −179.8 | −175.0 | 3.0 | 7.0 |
| YAGYAI (Horkaew | 3,4,5-trimethoxyphenyl | −10.6 | 172.2 | 175.8 | 2.8 | 19.4 |
| YIFPAF (Salhin | 2-hydroxyphenyl | 18.8 | 179.5 | 178.7 | 3.3 | 21.7 |
| ZAPKOS (Hou, 2012 | 3-nitrophenyl | −14.6 | 169.4 | 177.4 | 13.8 | 9.2 |
| ZIPLAO (Prachumrat | 2,3-dimethoxyphenyl | 9.6 | −175.3 | 172.9 | −1.3 | 9.3 |
| Non-planar | ||||||
| CABWUA (Meng | 2-hydroxy-5-methylphenyl | 18.4 | −178.5 | −169.8 | 8.0 | 40.8 |
| CEDBAQ (Subashini | 4-(diethylamino)phenyl | 34.9 | −178.5 | −151.7 | 8.75 | 77.3 |
| HUCVIL (Hao, 2009 | 2-chlorophenyl | −22.5 | −179.2 | 177.4 | −4.2 | 30.5 |
| HUCWOS (Shi, 2009 | 4-methoxyphenyl | −50.9 | −177.5 | 174.8 | 9.2 | 46.6 |
| MOSPEQ (Qiu, 2009 | 5-chloro-2-hydroxyphenyl | 19.0 | −178.5 | −170.9 | 7.59 | 40.2 |
| PAQJID (Gopal Reddy | 4-ethylphenyl | −39.9 | 171.1 | 173.9 | 7.4 | 49.9 |
| PAWVUG (Rassem | 2-methoxyphenyl | 29.1 | −166.8 | −175.1 | 19.2 | 66.6 |
| PEDGOW (Saad | 3-chlorophenyl | −21.1 | 179.5 | 175.3 | −9.3 | 39.0 |
| XEBYUA (Rassem | 2-hydroxy-4-methoxyphenyl | 28.7 | 178.1 | −169.8 | 1.3 | 40.6 |
Experimental details
| Crystal data | |
| Chemical formula | C14H12N2O4 |
|
| 272.26 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 296 |
|
| 11.5352 (8), 7.1711 (5), 15.0606 (10) |
| β (°) | 108.548 (2) |
|
| 1181.10 (14) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.11 |
| Crystal size (mm) | 0.80 × 0.21 × 0.07 |
| Data collection | |
| Diffractometer | Bruker APEXII DUO CCD area-detector |
| Absorption correction | Multi-scan ( |
|
| 0.924, 0.954 |
| No. of measured, independent and observed [ | 22559, 3200, 2453 |
|
| 0.024 |
| (sin θ/λ)max (Å−1) | 0.686 |
| Refinement | |
|
| 0.050, 0.161, 1.05 |
| No. of reflections | 3200 |
| No. of parameters | 197 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.35, −0.19 |
Computer programs: APEX2 and SAINT (Bruker, 2012 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2013 (Sheldrick, 2015 ▸), Mercury (Macrae et al., 2006 ▸) and PLATON (Spek, 2009 ▸).
| C14H12N2O4 | |
| Monoclinic, | Mo |
| Cell parameters from 6293 reflections | |
| θ = 2.9–29.2° | |
| µ = 0.11 mm−1 | |
| β = 108.548 (2)° | |
| Plate, colourless | |
| 0.80 × 0.21 × 0.07 mm |
| Bruker APEXII DUO CCD area-detector diffractometer | 3200 independent reflections |
| Radiation source: fine-focus sealed tube | 2453 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 29.2°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Bruker, 2012) | |
| 22559 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3200 reflections | Δρmax = 0.35 e Å−3 |
| 197 parameters | Δρmin = −0.18 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| O1 | 0.87093 (9) | 0.31797 (18) | 0.75119 (6) | 0.0493 (3) | |
| O2 | 0.72990 (8) | 0.42338 (15) | 0.31133 (6) | 0.0439 (3) | |
| O3 | 0.36583 (9) | 0.37514 (15) | −0.12560 (6) | 0.0432 (3) | |
| O4 | 0.11997 (10) | 0.35694 (18) | −0.18715 (7) | 0.0547 (3) | |
| N1 | 0.54178 (10) | 0.37659 (17) | 0.32223 (7) | 0.0392 (3) | |
| N2 | 0.48862 (10) | 0.38068 (17) | 0.22612 (7) | 0.0387 (3) | |
| C1 | 0.64041 (11) | 0.3493 (2) | 0.52044 (8) | 0.0360 (3) | |
| H1A | 0.555998 | 0.341901 | 0.493279 | 0.043* | |
| C2 | 0.69125 (11) | 0.32969 (19) | 0.61626 (8) | 0.0370 (3) | |
| H2A | 0.641478 | 0.308993 | 0.653221 | 0.044* | |
| C3 | 0.81673 (12) | 0.34105 (19) | 0.65681 (8) | 0.0359 (3) | |
| C4 | 0.89049 (12) | 0.3773 (2) | 0.60204 (9) | 0.0429 (3) | |
| H4A | 0.974622 | 0.389056 | 0.629625 | 0.051* | |
| C5 | 0.83860 (12) | 0.3960 (2) | 0.50639 (9) | 0.0398 (3) | |
| H5A | 0.888474 | 0.419686 | 0.469812 | 0.048* | |
| C6 | 0.71320 (11) | 0.38002 (16) | 0.46381 (8) | 0.0312 (3) | |
| C7 | 0.66306 (11) | 0.39454 (18) | 0.36014 (8) | 0.0334 (3) | |
| C8 | 0.37218 (12) | 0.37651 (18) | 0.19709 (8) | 0.0357 (3) | |
| H8A | 0.329660 | 0.374477 | 0.240199 | 0.043* | |
| C9 | 0.30468 (12) | 0.37489 (17) | 0.09713 (8) | 0.0332 (3) | |
| C10 | 0.36617 (11) | 0.38007 (18) | 0.03124 (8) | 0.0339 (3) | |
| H10A | 0.451058 | 0.387612 | 0.051040 | 0.041* | |
| C11 | 0.30251 (11) | 0.37414 (17) | −0.06263 (8) | 0.0332 (3) | |
| C12 | 0.17505 (12) | 0.36368 (19) | −0.09316 (9) | 0.0377 (3) | |
| C13 | 0.11375 (12) | 0.3624 (2) | −0.02790 (9) | 0.0434 (3) | |
| H13A | 0.028756 | 0.358471 | −0.047790 | 0.052* | |
| C14 | 0.17809 (12) | 0.3669 (2) | 0.06705 (9) | 0.0400 (3) | |
| H14A | 0.136252 | 0.364586 | 0.110600 | 0.048* | |
| H1O1 | 0.8288 (18) | 0.256 (3) | 0.7732 (15) | 0.074 (6)* | |
| H1O3 | 0.324 (2) | 0.421 (3) | −0.1808 (16) | 0.092 (7)* | |
| H1O4 | 0.046 (2) | 0.345 (3) | −0.1964 (16) | 0.085 (7)* | |
| H1N1 | 0.4954 (19) | 0.342 (3) | 0.3546 (14) | 0.069 (6)* |
| O1 | 0.0364 (5) | 0.0836 (8) | 0.0215 (4) | −0.0105 (5) | 0.0004 (4) | 0.0057 (4) |
| O2 | 0.0376 (5) | 0.0700 (7) | 0.0267 (4) | −0.0036 (4) | 0.0139 (4) | −0.0016 (4) |
| O3 | 0.0344 (5) | 0.0719 (7) | 0.0236 (4) | 0.0037 (4) | 0.0095 (4) | 0.0026 (4) |
| O4 | 0.0352 (6) | 0.0991 (9) | 0.0227 (5) | −0.0083 (5) | −0.0009 (4) | 0.0033 (5) |
| N1 | 0.0326 (6) | 0.0651 (7) | 0.0185 (5) | −0.0038 (5) | 0.0060 (4) | 0.0023 (4) |
| N2 | 0.0380 (6) | 0.0576 (7) | 0.0182 (5) | −0.0033 (5) | 0.0056 (4) | 0.0010 (4) |
| C1 | 0.0254 (6) | 0.0554 (7) | 0.0248 (6) | −0.0019 (5) | 0.0046 (4) | −0.0004 (5) |
| C2 | 0.0319 (6) | 0.0558 (8) | 0.0232 (6) | −0.0014 (5) | 0.0086 (5) | 0.0005 (5) |
| C3 | 0.0335 (6) | 0.0485 (7) | 0.0220 (5) | −0.0024 (5) | 0.0037 (5) | −0.0001 (5) |
| C4 | 0.0272 (6) | 0.0688 (9) | 0.0289 (6) | −0.0039 (6) | 0.0037 (5) | 0.0022 (6) |
| C5 | 0.0307 (6) | 0.0611 (8) | 0.0284 (6) | −0.0029 (5) | 0.0105 (5) | 0.0014 (5) |
| C6 | 0.0300 (6) | 0.0411 (6) | 0.0213 (5) | 0.0007 (4) | 0.0063 (4) | −0.0010 (4) |
| C7 | 0.0337 (6) | 0.0440 (7) | 0.0222 (6) | −0.0001 (5) | 0.0086 (5) | −0.0019 (4) |
| C8 | 0.0352 (7) | 0.0481 (7) | 0.0231 (6) | 0.0003 (5) | 0.0081 (5) | 0.0012 (5) |
| C9 | 0.0332 (6) | 0.0416 (6) | 0.0219 (5) | 0.0005 (5) | 0.0046 (5) | 0.0009 (4) |
| C10 | 0.0261 (5) | 0.0492 (7) | 0.0234 (6) | 0.0004 (5) | 0.0038 (4) | −0.0001 (5) |
| C11 | 0.0311 (6) | 0.0443 (7) | 0.0234 (5) | 0.0008 (5) | 0.0073 (4) | 0.0010 (4) |
| C12 | 0.0313 (6) | 0.0521 (7) | 0.0243 (6) | −0.0013 (5) | 0.0012 (5) | 0.0026 (5) |
| C13 | 0.0255 (6) | 0.0686 (9) | 0.0321 (7) | −0.0003 (5) | 0.0038 (5) | 0.0046 (6) |
| C14 | 0.0329 (6) | 0.0582 (8) | 0.0298 (6) | 0.0015 (5) | 0.0110 (5) | 0.0037 (5) |
| O1—C3 | 1.3688 (14) | C4—C5 | 1.3794 (18) |
| O1—H1O1 | 0.80 (2) | C4—H4A | 0.9300 |
| O2—C7 | 1.2403 (15) | C5—C6 | 1.3880 (18) |
| O3—C11 | 1.3688 (15) | C5—H5A | 0.9300 |
| O3—H1O3 | 0.88 (2) | C6—C7 | 1.4861 (15) |
| O4—C12 | 1.3556 (15) | C8—C9 | 1.4584 (16) |
| O4—H1O4 | 0.83 (3) | C8—H8A | 0.9300 |
| N1—C7 | 1.3385 (17) | C9—C14 | 1.3856 (18) |
| N1—N2 | 1.3811 (14) | C9—C10 | 1.3918 (17) |
| N1—H1N1 | 0.87 (2) | C10—C11 | 1.3709 (16) |
| N2—C8 | 1.2738 (17) | C10—H10A | 0.9300 |
| C1—C2 | 1.3812 (16) | C11—C12 | 1.3959 (18) |
| C1—C6 | 1.3916 (17) | C12—C13 | 1.3815 (19) |
| C1—H1A | 0.9300 | C13—C14 | 1.3861 (17) |
| C2—C3 | 1.3828 (18) | C13—H13A | 0.9300 |
| C2—H2A | 0.9300 | C14—H14A | 0.9300 |
| C3—C4 | 1.3852 (19) | ||
| C3—O1—H1O1 | 111.0 (15) | O2—C7—N1 | 121.71 (11) |
| C11—O3—H1O3 | 113.5 (15) | O2—C7—C6 | 121.79 (11) |
| C12—O4—H1O4 | 107.2 (16) | N1—C7—C6 | 116.49 (11) |
| C7—N1—N2 | 120.02 (11) | N2—C8—C9 | 120.86 (12) |
| C7—N1—H1N1 | 122.4 (13) | N2—C8—H8A | 119.6 |
| N2—N1—H1N1 | 116.6 (13) | C9—C8—H8A | 119.6 |
| C8—N2—N1 | 115.30 (11) | C14—C9—C10 | 119.41 (11) |
| C2—C1—C6 | 121.20 (11) | C14—C9—C8 | 119.93 (12) |
| C2—C1—H1A | 119.4 | C10—C9—C8 | 120.66 (11) |
| C6—C1—H1A | 119.4 | C11—C10—C9 | 120.47 (11) |
| C1—C2—C3 | 119.49 (11) | C11—C10—H10A | 119.8 |
| C1—C2—H2A | 120.3 | C9—C10—H10A | 119.8 |
| C3—C2—H2A | 120.3 | O3—C11—C10 | 119.04 (11) |
| O1—C3—C2 | 121.31 (12) | O3—C11—C12 | 120.68 (11) |
| O1—C3—C4 | 118.49 (11) | C10—C11—C12 | 120.26 (11) |
| C2—C3—C4 | 120.20 (11) | O4—C12—C13 | 124.53 (12) |
| C5—C4—C3 | 119.69 (12) | O4—C12—C11 | 116.14 (12) |
| C5—C4—H4A | 120.2 | C13—C12—C11 | 119.33 (11) |
| C3—C4—H4A | 120.2 | C12—C13—C14 | 120.43 (12) |
| C4—C5—C6 | 121.12 (12) | C12—C13—H13A | 119.8 |
| C4—C5—H5A | 119.4 | C14—C13—H13A | 119.8 |
| C6—C5—H5A | 119.4 | C9—C14—C13 | 120.07 (12) |
| C5—C6—C1 | 118.24 (11) | C9—C14—H14A | 120.0 |
| C5—C6—C7 | 118.67 (11) | C13—C14—H14A | 120.0 |
| C1—C6—C7 | 123.09 (11) | ||
| C7—N1—N2—C8 | −174.98 (12) | N1—N2—C8—C9 | −178.29 (10) |
| C6—C1—C2—C3 | 0.1 (2) | N2—C8—C9—C14 | 178.83 (12) |
| C1—C2—C3—O1 | −178.44 (12) | N2—C8—C9—C10 | −0.76 (19) |
| C1—C2—C3—C4 | 1.9 (2) | C14—C9—C10—C11 | −1.11 (18) |
| O1—C3—C4—C5 | 178.19 (13) | C8—C9—C10—C11 | 178.47 (11) |
| C2—C3—C4—C5 | −2.1 (2) | C9—C10—C11—O3 | −178.51 (12) |
| C3—C4—C5—C6 | 0.3 (2) | C9—C10—C11—C12 | 0.29 (19) |
| C4—C5—C6—C1 | 1.6 (2) | O3—C11—C12—O4 | −0.71 (19) |
| C4—C5—C6—C7 | −177.78 (12) | C10—C11—C12—O4 | −179.50 (12) |
| C2—C1—C6—C5 | −1.9 (2) | O3—C11—C12—C13 | 179.81 (13) |
| C2—C1—C6—C7 | 177.51 (12) | C10—C11—C12—C13 | 1.03 (19) |
| N2—N1—C7—O2 | 3.3 (2) | O4—C12—C13—C14 | 179.03 (13) |
| N2—N1—C7—C6 | −177.33 (10) | C11—C12—C13—C14 | −1.5 (2) |
| C5—C6—C7—O2 | −1.18 (19) | C10—C9—C14—C13 | 0.60 (19) |
| C1—C6—C7—O2 | 179.44 (13) | C8—C9—C14—C13 | −178.99 (12) |
| C5—C6—C7—N1 | 179.42 (12) | C12—C13—C14—C9 | 0.7 (2) |
| C1—C6—C7—N1 | 0.04 (18) |
| H··· | ||||
| O1—H1 | 0.80 (2) | 1.92 (2) | 2.7203 (15) | 171 (2) |
| O3—H1 | 0.88 (2) | 2.17 (2) | 3.0276 (13) | 163 (2) |
| O4—H1 | 0.82 (2) | 1.93 (2) | 2.7379 (16) | 166 (2) |
| N1—H1 | 0.87 (2) | 2.24 (2) | 3.0017 (16) | 146.1 (19) |