| Literature DB >> 31417791 |
Sergei Rigin1, Marina Fonari1.
Abstract
The mol-ecule of the title compound, C18H10Br2S4, has a C-shape, with C s mol-ecular symmetry. The dihedral angle between the planes of the di-thiol and phenyl rings is 8.35 (9)°. In the crystal, mol-ecules form helical chains along [001], the shortest inter-actions being π⋯S contacts within the helices. The inter-molecular inter-actions were investigated by Hirshfeld surface analysis. Density functional theory (DFT) was used to calculate HOMO-LUMO energy levels of the title compound and its trans isomer.Entities:
Keywords: DFT calculations; Hirshfeld surface analysis; crystal structure; derivative; tetrathiafulvalene; weak interactions
Year: 2019 PMID: 31417791 PMCID: PMC6690463 DOI: 10.1107/S2056989019009952
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1A view of the molecular structure of the title compound with the atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Suffix a corresponds to the symmetry operation x, −y + , z.
Figure 2The crystal packing of the title compound.
Figure 3Hirshfeld surface mapped over d norm for the title compound in the range −0.1138 to 1.1257 a.u.
Figure 4Molecular orbital energy levels of the title compound (cis isomer).
Figure 5Molecular orbital energy levels of the trans isomer of the title compound.
Calculated frontier molecular orbital energies (eV) for the title compound, its trans isomer and unsubstituted TTF and the conformational energy differences (kJ mol−1) between the cis and trans isomers
|
|
| TTF | |
|---|---|---|---|
|
| −5.0559 | −5.0186 | −4.8488 |
|
| −1.8283 | −1.8049 | −1.1252 |
|
| −6.3966 | −6.3941 | −6.6303 |
|
| −1.6457 | −1.6515 | −0.7140 |
| Δ | 3.2275 | 3.2137 | 3.7236 |
| Δ | 4.7508 | 4.7427 | 5.9163 |
| Chemical hardness (η) | 1.6138 | 1.6068 | 1.8618 |
| Chemical potential (μ) | 3.4421 | 3.4118 | 2.9870 |
| Electronegativity (χ) | −3.4421 | −3.4118 | −2.9870 |
| Electrophilicity index (ω) | 3.6709 | 3.6221 | 2.3961 |
| Δ | 1.6331 |
Experimental details
| Crystal data | |
| Chemical formula | C18H10Br2S4 |
|
| 514.32 |
| Crystal system, space group | Orthorhombic, |
| Temperature (K) | 90 |
|
| 7.5981 (6), 37.411 (3), 6.1991 (5) |
|
| 1762.1 (2) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 5.07 |
| Crystal size (mm) | 0.17 × 0.11 × 0.05 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| Absorption correction | Multi-scan ( |
|
| 0.625, 0.747 |
| No. of measured, independent and observed [ | 34235, 1580, 1530 |
|
| 0.066 |
| (sin θ/λ)max (Å−1) | 0.594 |
| Refinement | |
|
| 0.017, 0.041, 1.09 |
| No. of reflections | 1580 |
| No. of parameters | 109 |
| No. of restraints | 1 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.29, −0.29 |
| Absolute structure | Flack |
| Absolute structure parameter | 0.014 (5) |
Computer programs: APEX2 and SAINT (Bruker, 2016 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| C18H10Br2S4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 9390 reflections |
| θ = 2.2–28.4° | |
| µ = 5.07 mm−1 | |
| Prism, red | |
| 0.17 × 0.11 × 0.05 mm | |
| Bruker APEXII CCD diffractometer | 1530 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Bruker, 2016) | θmax = 25.0°, θmin = 1.1° |
| 34235 measured reflections | |
| 1580 independent reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.003 | |
| Δρmax = 0.29 e Å−3 | |
| 1580 reflections | Δρmin = −0.29 e Å−3 |
| 109 parameters | Absolute structure: Flack |
| 1 restraint | Absolute structure parameter: 0.014 (5) |
| Primary atom site location: dual |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Br1 | 0.79020 (5) | 0.53149 (2) | 0.04905 (9) | 0.02338 (12) | |
| S1 | 0.84814 (9) | 0.70527 (2) | 0.54322 (17) | 0.01212 (17) | |
| S2 | 0.64506 (12) | 0.70791 (2) | 0.95068 (14) | 0.01322 (19) | |
| C1 | 0.7514 (4) | 0.73205 (10) | 0.7447 (6) | 0.0120 (7) | |
| C2 | 0.6459 (5) | 0.66817 (10) | 0.8081 (6) | 0.0122 (8) | |
| H2 | 0.583254 | 0.648059 | 0.861560 | 0.015* | |
| C3 | 0.7350 (5) | 0.66579 (9) | 0.6225 (6) | 0.0117 (8) | |
| C4 | 0.7515 (4) | 0.63362 (9) | 0.4874 (6) | 0.0125 (8) | |
| C5 | 0.6886 (4) | 0.60030 (9) | 0.5600 (9) | 0.0159 (7) | |
| H5 | 0.637106 | 0.598599 | 0.699223 | 0.019* | |
| C6 | 0.7004 (5) | 0.56997 (10) | 0.4326 (7) | 0.0182 (8) | |
| H6 | 0.658485 | 0.547656 | 0.484660 | 0.022* | |
| C7 | 0.7737 (5) | 0.57250 (10) | 0.2289 (7) | 0.0148 (8) | |
| C8 | 0.8384 (4) | 0.60494 (10) | 0.1519 (6) | 0.0133 (7) | |
| H8 | 0.890749 | 0.606365 | 0.012995 | 0.016* | |
| C9 | 0.8253 (4) | 0.63529 (10) | 0.2817 (6) | 0.0129 (8) | |
| H9 | 0.867405 | 0.657541 | 0.228922 | 0.015* |
| Br1 | 0.0322 (2) | 0.01276 (17) | 0.02519 (19) | −0.00010 (14) | 0.0039 (2) | −0.0046 (2) |
| S1 | 0.0126 (4) | 0.0117 (4) | 0.0120 (4) | −0.0005 (3) | 0.0032 (5) | 0.0006 (5) |
| S2 | 0.0148 (4) | 0.0149 (4) | 0.0100 (4) | 0.0001 (4) | 0.0030 (4) | 0.0018 (4) |
| C1 | 0.0071 (15) | 0.0181 (17) | 0.0109 (16) | 0.0014 (14) | 0.0010 (12) | 0.0008 (15) |
| C2 | 0.0111 (17) | 0.0111 (19) | 0.0145 (18) | −0.0007 (13) | −0.0011 (14) | 0.0022 (14) |
| C3 | 0.0089 (17) | 0.0126 (19) | 0.0134 (18) | 0.0024 (13) | −0.0025 (12) | 0.0042 (13) |
| C4 | 0.0074 (15) | 0.0130 (18) | 0.017 (2) | 0.0019 (12) | −0.0022 (12) | 0.0010 (13) |
| C5 | 0.0136 (15) | 0.0191 (17) | 0.0149 (16) | 0.0002 (12) | 0.0022 (19) | 0.002 (2) |
| C6 | 0.022 (2) | 0.0124 (19) | 0.020 (2) | 0.0007 (15) | 0.0009 (16) | 0.0067 (17) |
| C7 | 0.0141 (18) | 0.0119 (19) | 0.0186 (19) | 0.0014 (14) | −0.0036 (16) | −0.0017 (16) |
| C8 | 0.0121 (18) | 0.0160 (19) | 0.0117 (17) | −0.0007 (14) | 0.0003 (15) | 0.0017 (15) |
| C9 | 0.0115 (17) | 0.0127 (19) | 0.0144 (18) | 0.0007 (14) | −0.0014 (14) | 0.0029 (15) |
| Br1—C7 | 1.901 (4) | C4—C9 | 1.394 (5) |
| S1—C1 | 1.762 (4) | C5—H5 | 0.9500 |
| S1—C3 | 1.778 (4) | C5—C6 | 1.385 (6) |
| S2—C1 | 1.760 (4) | C6—H6 | 0.9500 |
| S2—C2 | 1.729 (4) | C6—C7 | 1.384 (6) |
| C1—C1i | 1.343 (7) | C7—C8 | 1.394 (5) |
| C2—H2 | 0.9500 | C8—H8 | 0.9500 |
| C2—C3 | 1.338 (5) | C8—C9 | 1.396 (6) |
| C3—C4 | 1.472 (5) | C9—H9 | 0.9500 |
| C4—C5 | 1.409 (5) | ||
| C1—S1—C3 | 94.28 (17) | C6—C5—C4 | 121.4 (4) |
| C2—S2—C1 | 93.94 (18) | C6—C5—H5 | 119.3 |
| S2—C1—S1 | 114.5 (2) | C5—C6—H6 | 120.3 |
| C1i—C1—S1 | 124.66 (13) | C7—C6—C5 | 119.4 (4) |
| C1i—C1—S2 | 120.87 (12) | C7—C6—H6 | 120.3 |
| S2—C2—H2 | 120.1 | C6—C7—Br1 | 120.5 (3) |
| C3—C2—S2 | 119.9 (3) | C6—C7—C8 | 120.9 (4) |
| C3—C2—H2 | 120.1 | C8—C7—Br1 | 118.6 (3) |
| C2—C3—S1 | 115.3 (3) | C7—C8—H8 | 120.5 |
| C2—C3—C4 | 125.9 (3) | C7—C8—C9 | 119.1 (3) |
| C4—C3—S1 | 118.7 (2) | C9—C8—H8 | 120.5 |
| C5—C4—C3 | 120.9 (3) | C4—C9—C8 | 121.3 (3) |
| C9—C4—C3 | 121.2 (3) | C4—C9—H9 | 119.3 |
| C9—C4—C5 | 117.9 (4) | C8—C9—H9 | 119.3 |
| C4—C5—H5 | 119.3 |