Literature DB >> 31406645

Computational modeling of culture media for enhanced production of fibrinolytic enzyme from marine bacterium Fictibacillus sp. strain SKA27 and in vitro evaluation of fibrinolytic activity.

K Joji1, A Santhiagu1, Nisha Salim1.   

Abstract

The present study reports the optimized production and purification of an extremely active fibrinolytic enzyme from newly isolated marine bacterium Fictibacillus sp. strain SKA27, with a specific activity of 125,107.85 U/mg and an apparent molecular weight of 28 kDa on SDS-PAGE. Wheat bran extract used for submerged production proved to be highly beneficial and enhanced fibrinolytic enzyme production when combined with yeast extract and CaCl2. Optimization of culture media by response surface methodology (RSM) resulted in high root mean square error (RMSE), which led to the training of a back propagation multilayer artificial neural network (ANN) with 3-5-1 topology for better prediction quality. The prediction and optimization capabilities of regression and ANN were critically examined and ANN displayed higher proficiency with R 2 of 0.99 and RMSE of 2.0 compared to 0.98 R 2 and 48.9 RMSE of the regression model. An adept ANN linked genetic algorithm (GA) optimized the medium components to achieve 1.8-fold higher enzyme production (4175.41 U/mL). Further, a new and improved in vitro qualitative analysis displayed high specificity of purified enzyme to fibrin.

Entities:  

Keywords:  Fibrinolytic enzyme; Genetic algorithm; Marine Fictibacillus sp.; Neural network; Wheat bran extract

Year:  2019        PMID: 31406645      PMCID: PMC6684708          DOI: 10.1007/s13205-019-1853-y

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  27 in total

Review 1.  The species concept for prokaryotes.

Authors:  R Rosselló-Mora; R Amann
Journal:  FEMS Microbiol Rev       Date:  2001-01       Impact factor: 16.408

Review 2.  An overview on fermentation, downstream processing and properties of microbial alkaline proteases.

Authors:  R Gupta; Q K Beg; S Khan; B Chauhan
Journal:  Appl Microbiol Biotechnol       Date:  2002-10-12       Impact factor: 4.813

Review 3.  Zymographic evaluation of plasminogen activators and plasminogen activator inhibitors.

Authors:  Melinda L Ramsby
Journal:  Adv Clin Chem       Date:  2004       Impact factor: 5.394

4.  Optimization of cold-active protease production by the psychrophilic bacterium Colwellia sp. NJ341 with response surface methodology.

Authors:  Quanfu Wang; Yanhua Hou; Zhong Xu; Jinlai Miao; Guangyou Li
Journal:  Bioresour Technol       Date:  2007-05-11       Impact factor: 9.642

Review 5.  Panning for chemical gold: marine bacteria as a source of new therapeutics.

Authors:  Philip G Williams
Journal:  Trends Biotechnol       Date:  2008-11-18       Impact factor: 19.536

6.  The effects of wheat bran composition on the production of biomass-hydrolyzing enzymes by Penicillium decumbens.

Authors:  Xianyun Sun; Ziyong Liu; Yinbo Qu; Xuezhi Li
Journal:  Appl Biochem Biotechnol       Date:  2007-09-22       Impact factor: 2.926

7.  A newly derived protein from Bacillus subtilis natto with both antithrombotic and fibrinolytic effects.

Authors:  Kazunobu Omura; Masahito Hitosugi; Xia Zhu; Masashi Ikeda; Hiroaki Maeda; Shogo Tokudome
Journal:  J Pharmacol Sci       Date:  2005-10-27       Impact factor: 3.337

8.  Purification and characterization of nattokinase from Bacillus subtilis natto B-12.

Authors:  Cong Wang; Ming Du; Dongmei Zheng; Fandong Kong; Guoren Zu; Yibing Feng
Journal:  J Agric Food Chem       Date:  2009-10-28       Impact factor: 5.279

9.  Modelling and optimization of fermentation factors for enhancement of alkaline protease production by isolated Bacillus circulans using feed-forward neural network and genetic algorithm.

Authors:  Ch Subba Rao; T Sathish; M Mahalaxmi; G Suvarna Laxmi; R Sreenivas Rao; R S Prakasham
Journal:  J Appl Microbiol       Date:  2007-10-22       Impact factor: 3.772

10.  THE ESTIMATION OF PEPSIN, TRYPSIN, PAPAIN, AND CATHEPSIN WITH HEMOGLOBIN.

Authors:  M L Anson
Journal:  J Gen Physiol       Date:  1938-09-20       Impact factor: 4.086

View more
  1 in total

Review 1.  Role of Fibrinolytic Enzymes in Anti-Thrombosis Therapy.

Authors:  Farwa Altaf; Shourong Wu; Vivi Kasim
Journal:  Front Mol Biosci       Date:  2021-05-28
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.