| Literature DB >> 31402628 |
Christine Lo1,2, Siddharth Arora1,3, Fahd Baig1,2, Michael A Lawton4, Claire El Mouden1,2, Thomas R Barber1,2, Claudio Ruffmann1,2, Johannes C Klein1, Peter Brown2,5, Yoav Ben-Shlomo4, Maarten de Vos6, Michele T Hu1,2.
Abstract
OBJECTIVE: We recently demonstrated that 998 features derived from a simple 7-minute smartphone test could distinguish between controls, people with Parkinson's and people with idiopathic Rapid Eye Movement sleep behavior disorder, with mean sensitivity/specificity values of 84.6-91.9%. Here, we investigate whether the same smartphone features can be used to predict future clinically relevant outcomes in early Parkinson's.Entities:
Mesh:
Year: 2019 PMID: 31402628 PMCID: PMC6689691 DOI: 10.1002/acn3.50853
Source DB: PubMed Journal: Ann Clin Transl Neurol ISSN: 2328-9503 Impact factor: 4.511
Figure 1Smartphone models. In the search for a scalable solution to the quantification of motor symptoms in Parkinson's, an Android based smartphone app was installed on a range of consumer grade smartphones that were used in clinic and provided to participants to take home. Participants also had the option of being sent a link to download the app onto their own Android smartphone. A specialized smartphone app was used to collect the raw accelerometer, microphone and screen data and was run alongside KitKat, Lollipop, Marshmallow, Nougat, and Oreo Android operating systems. The raw data from the app was encrypted, time‐stamped, and uploaded to a secure online server. The processing and analysis of the data was performed separately using computer‐based Matlab® software (R2018a; Mathworks®, USA). “Others” include: Samsung Galaxy Ace 4 SM‐G357FZ, Samsung Galaxy Ace 2 GT‐I8160, Samsung Galaxy S3 Mini GT‐I8200N, LG Optimus 3G CX670, Samsung Galaxy S III mini I8190, Samsung Galaxy J5 J500FN, Sony Xperia L C2105, Moto G LTE XT1039, Huawei Ascend G510, Samsung Galaxy S4 I9505.
Smartphone predictions: outcome definitions and exclusion criteria.
| Future outcome in 18 months' time | Clinical tool | Baseline exclusion | Outcome definition |
|---|---|---|---|
| Falls | Falls questionnaire Frequency of self‐reported falling |
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| Freezing | Freezing of gait questionnaire |
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| Postural instability | Hoehn and Yahr |
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| Cognitive impairment | Montreal Cognitive Assessment |
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| Difficulty doing hobbies | Movement Disorders Society‐Unified Parkinson's Disease Rating Scale part II |
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| Need for help at home | Social background questionnaire: Self‐reported need for help at home |
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Abbreviation: MoCA, Montreal Cognitive Assessment.
A MoCA score < 26 has previously been found to be associated with a sensitivity of 86% and specificity of 72% in screening for individuals with deficits on neuropsychological testing in at least two domains.33
Figure 2Flow charts demonstrating the time windows whose recordings were included in the analyses of the future onset of (A) falls, (B) freezing, (C) postural instability, (D) cognitive impairment, (E) difficulty doing hobbies, and (F) need for help at home.
Group characteristics at the time of the smartphone recordings.
| Baseline data | Future prediction | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Falls | Freezing | Postural Instability | Cognitive impairment | Difficulty doing hobbies | Need for help | |||||||||||||
| Group | Falls | No falls |
| Freezing | No freezing |
| Postural instability | No postural instability |
| Cognitive impairment | No cognitive impairment |
| Difficulty doing hobbies | No difficulty doing hobbies |
| Need for help | No need for help |
|
| No. of participants | 39 | 140 | ‐ | 41 | 145 | ‐ | 21 | 179 | ‐ | 28 | 82 | ‐ | 16 | 204 | ‐ | 11 | 28 | ‐ |
| No. of time windows | 39 | 152 | ‐ | 41 | 160 | ‐ | 21 | 202 | ‐ | 28 | 98 | ‐ | 16 | 226 | ‐ | 11 | 33 | ‐ |
| Mean (SD) Age at visit | 71.9 (8.5) | 66.6 (9.3) | 0.00 | 69.9 (9.4) | 67.6 (8.7) | 0.14 | 74 (7.7) | 67.6 (9) | 0.00 | 70.0 (7.5) | 64.8 (9.6) | 0.00 | 70.2 (9.2) | 68 (9.3) | 0.35 | 69.0 (8.4) | 64.2 (10.5) | 0.18 |
| No. (%) male | 27 (69) | 92 (61) | 0.32 | 25 (61) | 104 (65) | 0.63 | 18 (86) | 125 (62) | 0.03 | 18 (64) | 53 (54) | 0.34 | 13 (81) | 140 (62) | 0.12 | 6 (55) | 17 (52) | 0.86 |
| Mean (SD) duration (years) from diagnosis to visit | 4.1 (1.9) | 3.2 (2.2) | 0.02 | 4 (2.2) | 3.1 (2) | 0.02 | 4.2 (1.8) | 3.4 (2.2) | 0.09 | 3.7 (2.4) | 3.7 (2.4) | 0.93 | 3.5 (2.1) | 3.5 (2.2) | 0.99 | 4.0 (1.6) | 4.3 (2.4) | 0.73 |
| Mean (SD) levodopa dose equivalent | 510.8 (243.1) | 410.4 (288.4) | 0.05 | 474.3 (278) | 402.5 (257.8) | 0.12 | 586.8 (359.6) | 431.3 (286.6) | 0.02 | 441.8 (272.6) | 462.7 (293.8) | 0.74 | 525.9 (293.7) | 444 (288.2) | 0.27 | 457.0 (250.1) | 427.9 (264.3) | 0.75 |
| Mean (SD) MDS‐UPDRS III | 31.2 (13.2) | 26.2 (11.2) | 0.02 | 31.2 (13.2) | 25.6 (10.3) | 0.00 | 33.7 (11.2) | 26.5 (10.7) | 0.00 | 27.6 (8.8) | 24.3 (11.1) | 0.16 | 35 (16.3) | 27 (11.1) | 0.01 | 24.1 (16.0) | 23.5 (9.3) | 0.88 |
| Mean (SD) MoCA | 24.9 (3.6) | 25.4 (3.4) | 0.31 | 25.6 (3.8) | 25.4 (3.5) | 0.79 | 23.2 (5.2) | 25.4 (3.5) | 0.00 | 27.4 (1.3) | 28.0 (1.4) | 0.04 | 23.4 (2.7) | 25.4 (3.3) | 0.01 | 25.4 (3.3) | 26.9 (2.4) | 0.10 |
| Mean (SD) number of recordings per participant | 6 (9.9) | 7 (10.6) | 0.59 | 9.5 (12) | 6.9 (10.5) | 0.18 | 2.5 (5.5) | 7.6 (11) | 0.04 | 8.7 (11.4) | 6.8 (10.3) | 0.42 | 6.5 (11.3) | 7 (10.6) | 0.84 | 10.1 (11.7) | 7.5 (10.8) | 0.50 |
Abbreviations: MoCA, Montreal Cognitive Assessment, MDS‐UPDRS, Movement Disorders Society‐Unified Parkinson's Disease Rating Scale.
P‐value determined using a two‐sample t‐test or chi squared test to compare those with and without the future outcome of interest.
Data were balanced as described in the methods section, prior to training of machine learning algorithms, treating time windows independently.
A MoCA score was not available for two participants within the group that did not develop falling,
Two participants who did not develop freezing,
Two participants who did not develop postural instability and
Two participants who did not develop difficulty with hobbies in the future. The means/SDs for the aforementioned subgroups were calculated across participants for whom data was available.
Figure 3Receiver operating characteristic curves for classification by random forests in the prediction of the future onset of (A) falling, (B) freezing, (C) postural instability, (D) cognitive impairment, (E) difficulty doing hobbies and (F) the need for help. The diagonal dotted line corresponds to an AUC of 0.50 and indicates an uninformative model. The false positive rate (1‐specificity) is shown on the x axis and the true positive rate (sensitivity) is shown on the y axis.
Results of random forests analyses with 10‐fold and leave one subject out cross validation using all 998 and the top 30 smartphone features.
| Prediction | AUC | ||
|---|---|---|---|
| 10‐fold CV | LOSO CV | ||
| 998 features | Top 30 features | Top 30 features | |
| Falls | 0.94 | 0.88 | 0.79 |
| Freezing | 0.95 | 0.75 | 0.77 |
| Postural Instability | 0.90 | 0.91 | 0.79 |
| Cognitive impairment | 0.97 | 0.81 | 0.82 |
| Difficulty doing hobbies | 0.93 | 0.88 | 0.78 |
| Need for help | 0.99 | 0.85 | 0.83 |
Abbreviations: AUC, area under the curve, LOSO, leave one subject out and CV, cross validation.
Comparison with two existing logistic regression clinical prediction models for the prediction of future freezing and a composite adverse outcome of cognitive impairment, postural instability, or death.
| Prediction | Method | Input variables | AUC (95% confidence intervals) |
|---|---|---|---|
| Future freezing | Logistic regression model as described by Ehgoetz et al. |
Two clinical variables: | 0.56 (0.44–0.67) |
| Random forests with LOSO CV | Top 2 smartphone features | 0.59 (0.55–0.64) | |
| Random forests with LOSO CV | Top 30 smartphone features | 0.77 (0.73–0.80) | |
| Composite adverse outcome of dementia, postural instability or death | Logistic regression model as described by Velseboer et al. |
three clinical variables: | 0.81 (0.40–0.96) |
| Random forests with LOSO CV | Top 3 smartphone features | 0.63 (0.52–0.71) | |
| Random forests with LOSO CV | Top 30 smartphone features | 0.76 (0.68–0.84) |
Abbreviations: AUC, area under the curve, FOG, Freezing of gait, HADS, Hospital anxiety and depression scale, LOSO CV, leave one subject out cross validation.
Confidence intervals for the logistic regression model are calculated across single predictions for each set of clinical data whereas confidence intervals for LOSO CV are calculated using a bootstrapping approach; the two confidence intervals are therefore not directly comparable.
No participants had died by the time of their next clinic visit.