Literature DB >> 31399535

How a purine salvage enzyme singles out the right base.

Lakshmeesha Kempaiah Nagappa1, Sundaram Balasubramanian2, Hemalatha Balaram3.   

Abstract

Two phosphoribosyltransferases in the purine salvage pathway exhibit exquisite substrate specificity despite the chemical similarity of their distinct substrates, but the basis for this discrimination was not fully understood. Ozeir et al. now employ a complementary biochemical, structural, and computational approach to deduce the chemical constraints governing binding and propose a distinct mechanism for catalysis in one of these enzymes, adenine phosphoribosyltransferase. These insights, built on data from an unexpected finding, finally provide direct answers to key questions regarding these enzymes and substrate recognition more generally.
© 2019 Nagappa et al.

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Year:  2019        PMID: 31399535      PMCID: PMC6690690          DOI: 10.1074/jbc.H119.010025

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  The 2.0 A structure of human hypoxanthine-guanine phosphoribosyltransferase in complex with a transition-state analog inhibitor.

Authors:  W Shi; C M Li; P C Tyler; R H Furneaux; C Grubmeyer; V L Schramm; S C Almo
Journal:  Nat Struct Biol       Date:  1999-06

2.  Approaching the transition state in the crystal structure of a phosphoribosyltransferase.

Authors:  P J Focia; S P Craig; A E Eakin
Journal:  Biochemistry       Date:  1998-12-08       Impact factor: 3.162

3.  Crystal structure of Toxoplasma gondii hypoxanthine-guanine phosphoribosyltransferase with XMP, pyrophosphate, and two Mg(2+) ions bound: insights into the catalytic mechanism.

Authors:  A Héroux; E L White; L J Ross; R L Davis; D W Borhani
Journal:  Biochemistry       Date:  1999-11-02       Impact factor: 3.162

4.  Transition State Analysis of Adenosine Triphosphate Phosphoribosyltransferase.

Authors:  Gert-Jan Moggré; Myles B Poulin; Peter C Tyler; Vern L Schramm; Emily J Parker
Journal:  ACS Chem Biol       Date:  2017-09-19       Impact factor: 5.100

5.  A comparative QM/MM simulation study of the reaction mechanisms of human and Plasmodium falciparum HG(X)PRTases.

Authors:  Aline Thomas; Martin J Field
Journal:  J Am Chem Soc       Date:  2006-08-09       Impact factor: 15.419

6.  Primary 14C and alpha secondary 3H substrate kinetic isotope effects for some phosphoribosyltransferases.

Authors:  R K Goitein; D Chelsky; S M Parsons
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

7.  The 2.0 A structure of malarial purine phosphoribosyltransferase in complex with a transition-state analogue inhibitor.

Authors:  W Shi; C M Li; P C Tyler; R H Furneaux; S M Cahill; M E Girvin; C Grubmeyer; V L Schramm; S C Almo
Journal:  Biochemistry       Date:  1999-08-03       Impact factor: 3.162

8.  Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction.

Authors:  Mohammad Ozeir; Jessica Huyet; Marie-Claude Burgevin; Benoît Pinson; Françoise Chesney; Jean-Marc Remy; Abdul Rauf Siddiqi; Roland Lupoli; Grégory Pinon; Christelle Saint-Marc; Jean-François Gibert; Renaud Morales; Irène Ceballos-Picot; Robert Barouki; Bertrand Daignan-Fornier; Anne Olivier-Bandini; Franck Augé; Pierre Nioche
Journal:  J Biol Chem       Date:  2019-06-03       Impact factor: 5.157

9.  Altering the purine specificity of hypoxanthine-guanine-xanthine phosphoribosyltransferase from Tritrichomonas foetus by structure-based point mutations in the enzyme protein.

Authors:  N R Munagala; C C Wang
Journal:  Biochemistry       Date:  1998-11-24       Impact factor: 3.162

10.  Transition state structure of Salmonella typhimurium orotate phosphoribosyltransferase.

Authors:  W Tao; C Grubmeyer; J S Blanchard
Journal:  Biochemistry       Date:  1996-01-09       Impact factor: 3.162

  10 in total

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