Literature DB >> 31397325

Crystal structure of the inhibitor-free form of the serine protease kallikrein-4.

Blake T Riley1, David E Hoke1, Sheena McGowan2, Ashley M Buckle1.   

Abstract

Kallikrein 4 (KLK4) is a serine protease that is predominantly expressed in the prostate and is overexpressed in prostate cancer. As such, it has gained attention as an attractive target for prostate cancer therapeutics. Currently, only liganded structures of KLK4 exist in the Protein Data Bank. Until now, inferences about the subtle structural changes in KLK4 upon ligand binding have been made by comparison to other liganded forms, rather than to an apo form. In this study, an inhibitor-free form of KLK4 was crystallized. The crystals obtained belonged to space group P1, contained four molecules in the asymmetric unit and diffracted to 1.64 Å resolution. Interestingly, a nonstandard rotamer of the specificity-determining residue Asp189 was observed in all chains. This model will provide a useful unliganded structure for the future structure-guided design of KLK4 inhibitors.

Entities:  

Keywords:  KLK4; apo structure; kallikrein-related peptidase 4; unliganded

Mesh:

Substances:

Year:  2019        PMID: 31397325      PMCID: PMC6688662          DOI: 10.1107/S2053230X19009610

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  20 in total

1.  Defining the extended substrate specificity of kallikrein 1-related peptidases.

Authors:  Carla A Borgoño; Julie-Ann Gavigan; Juliano Alves; Ben Bowles; Jennifer L Harris; Georgia Sotiropoulou; Eleftherios P Diamandis
Journal:  Biol Chem       Date:  2007-11       Impact factor: 3.915

2.  XDS.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

3.  Potent, Selective, and Cell-Penetrating Inhibitors of Kallikrein-Related Peptidase 4 Based on the Cyclic Peptide MCoTI-II.

Authors:  Joakim E Swedberg; Hafiza Abdul Ghani; Jonathan M Harris; Simon J de Veer; David J Craik
Journal:  ACS Med Chem Lett       Date:  2018-11-21       Impact factor: 4.345

4.  Crystal structures of human tissue kallikrein 4: activity modulation by a specific zinc binding site.

Authors:  Mekdes Debela; Viktor Magdolen; Valerie Grimminger; Christian Sommerhoff; Albrecht Messerschmidt; Robert Huber; Rainer Friedrich; Wolfram Bode; Peter Goettig
Journal:  J Mol Biol       Date:  2006-08-03       Impact factor: 5.469

5.  Molecular cloning and characterization of prostase, an androgen-regulated serine protease with prostate-restricted expression.

Authors:  P S Nelson; L Gan; C Ferguson; P Moss; R Gelinas; L Hood; K Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

6.  Prostase/KLK-L1 is a new member of the human kallikrein gene family, is expressed in prostate and breast tissues, and is hormonally regulated.

Authors:  G M Yousef; C V Obiezu; L Y Luo; M H Black; E P Diamandis
Journal:  Cancer Res       Date:  1999-09-01       Impact factor: 12.701

7.  KLK4 Inhibition by Cyclic and Acyclic Peptides: Structural and Dynamical Insights into Standard-Mechanism Protease Inhibitors.

Authors:  Blake T Riley; Olga Ilyichova; Simon J de Veer; Joakim E Swedberg; Emily Wilson; David E Hoke; Jonathan M Harris; Ashley M Buckle
Journal:  Biochemistry       Date:  2019-05-13       Impact factor: 3.162

8.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  MX1: a bending-magnet crystallography beamline serving both chemical and macromolecular crystallography communities at the Australian Synchrotron.

Authors:  Nathan Philip Cowieson; David Aragao; Mark Clift; Daniel J Ericsson; Christine Gee; Stephen J Harrop; Nathan Mudie; Santosh Panjikar; Jason R Price; Alan Riboldi-Tunnicliffe; Rachel Williamson; Tom Caradoc-Davies
Journal:  J Synchrotron Radiat       Date:  2015-01-01       Impact factor: 2.616

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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