Literature DB >> 31395542

Identifying Autism Spectrum Disorder With Multi-Site fMRI via Low-Rank Domain Adaptation.

Mingliang Wang, Daoqiang Zhang, Jiashuang Huang, Pew-Thian Yap, Dinggang Shen, Mingxia Liu.   

Abstract

Autism spectrum disorder (ASD) is a neurodevelopmental disorder that is characterized by a wide range of symptoms. Identifying biomarkers for accurate diagnosis is crucial for early intervention of ASD. While multi-site data increase sample size and statistical power, they suffer from inter-site heterogeneity. To address this issue, we propose a multi-site adaption framework via low-rank representation decomposition (maLRR) for ASD identification based on functional MRI (fMRI). The main idea is to determine a common low-rank representation for data from the multiple sites, aiming to reduce differences in data distributions. Treating one site as a target domain and the remaining sites as source domains, data from these domains are transformed (i.e., adapted) to a common space using low-rank representation. To reduce data heterogeneity between the target and source domains, data from the source domains are linearly represented in the common space by those from the target domain. We evaluated the proposed method on both synthetic and real multi-site fMRI data for ASD identification. The results suggest that our method yields superior performance over several state-of-the-art domain adaptation methods.

Entities:  

Year:  2019        PMID: 31395542      PMCID: PMC7169995          DOI: 10.1109/TMI.2019.2933160

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  37 in total

1.  Reveal Consistent Spatial-Temporal Patterns from Dynamic Functional Connectivity for Autism Spectrum Disorder Identification.

Authors:  Yingying Zhu; Xiaofeng Zhu; Han Zhang; Wei Gao; Dinggang Shen; Guorong Wu
Journal:  Med Image Comput Comput Assist Interv       Date:  2016-10-02

2.  DISCOVERING PATIENT PHENOTYPES USING GENERALIZED LOW RANK MODELS.

Authors:  Alejandro Schuler; Vincent Liu; Joe Wan; Alison Callahan; Madeleine Udell; David E Stark; Nigam H Shah
Journal:  Pac Symp Biocomput       Date:  2016

3.  Joint feature-sample selection and robust diagnosis of Parkinson's disease from MRI data.

Authors:  Ehsan Adeli; Feng Shi; Le An; Chong-Yaw Wee; Guorong Wu; Tao Wang; Dinggang Shen
Journal:  Neuroimage       Date:  2016-06-10       Impact factor: 6.556

4.  Abnormal functional connectivity of default mode sub-networks in autism spectrum disorder patients.

Authors:  Michal Assaf; Kanchana Jagannathan; Vince D Calhoun; Laura Miller; Michael C Stevens; Robert Sahl; Jacqueline G O'Boyle; Robert T Schultz; Godfrey D Pearlson
Journal:  Neuroimage       Date:  2010-06-02       Impact factor: 6.556

5.  Early diagnosis of autism and impact on prognosis: a narrative review.

Authors:  Elisabeth Fernell; Mats Anders Eriksson; Christopher Gillberg
Journal:  Clin Epidemiol       Date:  2013-02-21       Impact factor: 4.790

6.  Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example.

Authors:  Alexandre Abraham; Michael P Milham; Adriana Di Martino; R Cameron Craddock; Dimitris Samaras; Bertrand Thirion; Gael Varoquaux
Journal:  Neuroimage       Date:  2016-11-16       Impact factor: 7.400

7.  Resting state fMRI reveals a default mode dissociation between retrosplenial and medial prefrontal subnetworks in ASD despite motion scrubbing.

Authors:  Tuomo Starck; Juha Nikkinen; Jukka Rahko; Jukka Remes; Tuula Hurtig; Helena Haapsamo; Katja Jussila; Sanna Kuusikko-Gauffin; Marja-Leena Mattila; Eira Jansson-Verkasalo; David L Pauls; Hanna Ebeling; Irma Moilanen; Osmo Tervonen; Vesa J Kiviniemi
Journal:  Front Hum Neurosci       Date:  2013-11-22       Impact factor: 3.169

8.  Approaches to local connectivity in autism using resting state functional connectivity MRI.

Authors:  Jose O Maximo; Christopher L Keown; Aarti Nair; Ralph-Axel Müller
Journal:  Front Hum Neurosci       Date:  2013-10-08       Impact factor: 3.169

9.  Multisite functional connectivity MRI classification of autism: ABIDE results.

Authors:  Jared A Nielsen; Brandon A Zielinski; P Thomas Fletcher; Andrew L Alexander; Nicholas Lange; Erin D Bigler; Janet E Lainhart; Jeffrey S Anderson
Journal:  Front Hum Neurosci       Date:  2013-09-25       Impact factor: 3.169

10.  Resting-State Time-Varying Analysis Reveals Aberrant Variations of Functional Connectivity in Autism.

Authors:  Zhijun Yao; Bin Hu; Yuanwei Xie; Fang Zheng; Guangyao Liu; Xuejiao Chen; Weihao Zheng
Journal:  Front Hum Neurosci       Date:  2016-09-16       Impact factor: 3.169

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  17 in total

1.  Convolutional Recurrent Neural Network for Dynamic Functional MRI Analysis and Brain Disease Identification.

Authors:  Kai Lin; Biao Jie; Peng Dong; Xintao Ding; Weixin Bian; Mingxia Liu
Journal:  Front Neurosci       Date:  2022-07-06       Impact factor: 5.152

2.  Identification of Pathogenetic Brain Regions via Neuroimaging Data for Diagnosis of Autism Spectrum Disorders.

Authors:  Yu Wang; Yu Fu; Xun Luo
Journal:  Front Neurosci       Date:  2022-05-17       Impact factor: 5.152

3.  Spatial-Temporal Dependency Modeling and Network Hub Detection for Functional MRI Analysis via Convolutional-Recurrent Network.

Authors:  Mingliang Wang; Chunfeng Lian; Dongren Yao; Daoqiang Zhang; Mingxia Liu; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2019-12-06       Impact factor: 4.538

4.  Spatially-Constrained Fisher Representation for Brain Disease Identification With Incomplete Multi-Modal Neuroimages.

Authors:  Yongsheng Pan; Mingxia Liu; Chunfeng Lian; Yong Xia; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2020-03-24       Impact factor: 10.048

5.  Identifying and Predicting Autism Spectrum Disorder Based on Multi-Site Structural MRI With Machine Learning.

Authors:  YuMei Duan; WeiDong Zhao; Cheng Luo; XiaoJu Liu; Hong Jiang; YiQian Tang; Chang Liu; DeZhong Yao
Journal:  Front Hum Neurosci       Date:  2022-02-22       Impact factor: 3.169

6.  Disease-Image-Specific Learning for Diagnosis-Oriented Neuroimage Synthesis With Incomplete Multi-Modality Data.

Authors:  Yongsheng Pan; Mingxia Liu; Yong Xia; Dinggang Shen
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2022-09-15       Impact factor: 9.322

Review 7.  Domain Adaptation for Medical Image Analysis: A Survey.

Authors:  Hao Guan; Mingxia Liu
Journal:  IEEE Trans Biomed Eng       Date:  2022-02-18       Impact factor: 4.756

Review 8.  Machine Learning Methods for Diagnosing Autism Spectrum Disorder and Attention- Deficit/Hyperactivity Disorder Using Functional and Structural MRI: A Survey.

Authors:  Taban Eslami; Fahad Almuqhim; Joseph S Raiker; Fahad Saeed
Journal:  Front Neuroinform       Date:  2021-01-20       Impact factor: 4.081

9.  High-Order Laplacian Regularized Low-Rank Representation for Multimodal Dementia Diagnosis.

Authors:  Aimei Dong; Zhigang Li; Mingliang Wang; Dinggang Shen; Mingxia Liu
Journal:  Front Neurosci       Date:  2021-03-12       Impact factor: 4.677

10.  Domain Adaptation Using a Three-Way Decision Improves the Identification of Autism Patients from Multisite fMRI Data.

Authors:  Chunlei Shi; Xianwei Xin; Jiacai Zhang
Journal:  Brain Sci       Date:  2021-05-08
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