Literature DB >> 31395441

Genomic medicine for undiagnosed diseases.

Anastasia L Wise1, Teri A Manolio2, George A Mensah3, Josh F Peterson4, Dan M Roden5, Cecelia Tamburro2, Marc S Williams6, Eric D Green2.   

Abstract

One of the primary goals of genomic medicine is to improve diagnosis through identification of genomic conditions, which could improve clinical management, prevent complications, and promote health. We explore how genomic medicine is being used to obtain molecular diagnoses for patients with previously undiagnosed diseases in prenatal, paediatric, and adult clinical settings. We focus on the role of clinical genomic sequencing (exome and genome) in aiding patients with conditions that are undiagnosed even after extensive clinical evaluation and testing. In particular, we explore the impact of combining genomic and phenotypic data and integrating multiple data types to improve diagnoses for patients with undiagnosed diseases, and we discuss how these genomic sequencing diagnoses could change clinical management.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31395441      PMCID: PMC6709871          DOI: 10.1016/S0140-6736(19)31274-7

Source DB:  PubMed          Journal:  Lancet        ISSN: 0140-6736            Impact factor:   79.321


  48 in total

Review 1.  The National Institutes of Health undiagnosed diseases program.

Authors:  Cynthia J Tifft; David R Adams
Journal:  Curr Opin Pediatr       Date:  2014-12       Impact factor: 2.856

2.  Molecular findings among patients referred for clinical whole-exome sequencing.

Authors:  Yaping Yang; Donna M Muzny; Fan Xia; Zhiyv Niu; Richard Person; Yan Ding; Patricia Ward; Alicia Braxton; Min Wang; Christian Buhay; Narayanan Veeraraghavan; Alicia Hawes; Theodore Chiang; Magalie Leduc; Joke Beuten; Jing Zhang; Weimin He; Jennifer Scull; Alecia Willis; Megan Landsverk; William J Craigen; Mir Reza Bekheirnia; Asbjorg Stray-Pedersen; Pengfei Liu; Shu Wen; Wendy Alcaraz; Hong Cui; Magdalena Walkiewicz; Jeffrey Reid; Matthew Bainbridge; Ankita Patel; Eric Boerwinkle; Arthur L Beaudet; James R Lupski; Sharon E Plon; Richard A Gibbs; Christine M Eng
Journal:  JAMA       Date:  2014-11-12       Impact factor: 56.272

3.  Clinical exome sequencing for genetic identification of rare Mendelian disorders.

Authors:  Hane Lee; Joshua L Deignan; Naghmeh Dorrani; Samuel P Strom; Sibel Kantarci; Fabiola Quintero-Rivera; Kingshuk Das; Traci Toy; Bret Harry; Michael Yourshaw; Michelle Fox; Brent L Fogel; Julian A Martinez-Agosto; Derek A Wong; Vivian Y Chang; Perry B Shieh; Christina G S Palmer; Katrina M Dipple; Wayne W Grody; Eric Vilain; Stanley F Nelson
Journal:  JAMA       Date:  2014-11-12       Impact factor: 56.272

4.  Ethical and policy issues in genetic testing and screening of children.

Authors: 
Journal:  Pediatrics       Date:  2013-02-21       Impact factor: 7.124

5.  Clinical diagnostics in human genetics with semantic similarity searches in ontologies.

Authors:  Sebastian Köhler; Marcel H Schulz; Peter Krawitz; Sebastian Bauer; Sandra Dölken; Claus E Ott; Christine Mundlos; Denise Horn; Stefan Mundlos; Peter N Robinson
Journal:  Am J Hum Genet       Date:  2009-10       Impact factor: 11.025

6.  The National Institutes of Health Undiagnosed Diseases Program: insights into rare diseases.

Authors:  William A Gahl; Thomas C Markello; Camilo Toro; Karin Fuentes Fajardo; Murat Sincan; Fred Gill; Hannah Carlson-Donohoe; Andrea Gropman; Tyler Mark Pierson; Gretchen Golas; Lynne Wolfe; Catherine Groden; Rena Godfrey; Michele Nehrebecky; Colleen Wahl; Dennis M D Landis; Sandra Yang; Anne Madeo; James C Mullikin; Cornelius F Boerkoel; Cynthia J Tifft; David Adams
Journal:  Genet Med       Date:  2011-09-26       Impact factor: 8.822

7.  Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions.

Authors:  Kelly D Farwell; Layla Shahmirzadi; Dima El-Khechen; Zöe Powis; Elizabeth C Chao; Brigette Tippin Davis; Ruth M Baxter; Wenqi Zeng; Cameron Mroske; Melissa C Parra; Stephanie K Gandomi; Ira Lu; Xiang Li; Hong Lu; Hsiao-Mei Lu; David Salvador; David Ruble; Monica Lao; Soren Fischbach; Jennifer Wen; Shela Lee; Aaron Elliott; Charles L M Dunlop; Sha Tang
Journal:  Genet Med       Date:  2014-11-13       Impact factor: 8.822

8.  Returning incidental findings from genetic research to children: views of parents of children affected by rare diseases.

Authors:  Erika Kleiderman; Bartha Maria Knoppers; Conrad V Fernandez; Kym M Boycott; Gail Ouellette; Durhane Wong-Rieger; Shelin Adam; Julie Richer; Denise Avard
Journal:  J Med Ethics       Date:  2013-12-19       Impact factor: 2.903

9.  The utility of the traditional medical genetics diagnostic evaluation in the context of next-generation sequencing for undiagnosed genetic disorders.

Authors:  Vandana Shashi; Allyn McConkie-Rosell; Bruce Rosell; Kelly Schoch; Kasturi Vellore; Marie McDonald; Yong-Hui Jiang; Pingxing Xie; Anna Need; David B Goldstein; David G Goldstein
Journal:  Genet Med       Date:  2013-08-29       Impact factor: 8.822

10.  Technical report: Ethical and policy issues in genetic testing and screening of children.

Authors:  Lainie Friedman Ross; Laine Friedman Ross; Howard M Saal; Karen L David; Rebecca R Anderson
Journal:  Genet Med       Date:  2013-02-21       Impact factor: 8.822

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  26 in total

1.  The Implementation Chasm Hindering Genome-informed Health Care.

Authors:  Kevin B Johnson; Ellen Wright Clayton; Justin Starren; Josh Peterson
Journal:  J Law Med Ethics       Date:  2020-03       Impact factor: 1.718

Review 2.  Estimating the number of diseases - the concept of rare, ultra-rare, and hyper-rare.

Authors:  C I Edvard Smith; Peter Bergman; Daniel W Hagey
Journal:  iScience       Date:  2022-07-01

Review 3.  Clinical and therapeutic significance of genetic variation in the GRIN gene family encoding NMDARs.

Authors:  Tim A Benke; Kristen Park; Ilona Krey; Chad R Camp; Rui Song; Amy J Ramsey; Hongjie Yuan; Stephen F Traynelis; Johannes Lemke
Journal:  Neuropharmacology       Date:  2021-09-22       Impact factor: 5.250

Review 4.  A systematic review of geographical inequities for accessing clinical genomic and genetic services for non-cancer related rare disease.

Authors:  Stephanie Best; Nada Vidic; Kim An; Felicity Collins; Susan M White
Journal:  Eur J Hum Genet       Date:  2022-01-20       Impact factor: 5.351

5.  Rapid Phenotype-Driven Gene Sequencing with the NeoSeq Panel: A Diagnostic Tool for Critically Ill Newborns with Suspected Genetic Disease.

Authors:  María José de Castro; Emiliano González-Vioque; Sofía Barbosa-Gouveia; Enrique Salguero; Segundo Rite; Olalla López-Suárez; Alejandro Pérez-Muñuzuri; María-Luz Couce
Journal:  J Clin Med       Date:  2020-07-23       Impact factor: 4.241

Review 6.  The emergence of new trends in clinical laboratory diagnosis.

Authors:  Mohammed A Alaidarous
Journal:  Saudi Med J       Date:  2020-11       Impact factor: 1.484

7.  Evaluating the clinical utility of early exome sequencing in diverse pediatric outpatient populations in the North Carolina Clinical Genomic Evaluation of Next-generation Exome Sequencing (NCGENES) 2 study: a randomized controlled trial.

Authors:  Jonathan S Berg; Jeannette T Bensen; Brooke S Staley; Laura V Milko; Margaret Waltz; Ida Griesemer; Lonna Mollison; Tracey L Grant; Laura Farnan; Myra Roche; Angelo Navas; Alexandra Lightfoot; Ann Katherine M Foreman; Julianne M O'Daniel; Suzanne C O'Neill; Feng-Chang Lin; Tamara S Roman; Alicia Brandt; Bradford C Powell; Christine Rini
Journal:  Trials       Date:  2021-06-14       Impact factor: 2.279

8.  GeneBreaker: Variant simulation to improve the diagnosis of Mendelian rare genetic diseases.

Authors:  Phillip A Richmond; Tamar V Av-Shalom; Oriol Fornes; Bhavi Modi; Alison M Elliott; Wyeth W Wasserman
Journal:  Hum Mutat       Date:  2021-02-10       Impact factor: 4.878

9.  Improving diagnosis for rare diseases: the experience of the Italian undiagnosed Rare diseases network.

Authors:  Marco Salvatore; Agata Polizzi; Maria Chiara De Stefano; Giovanna Floridia; Simone Baldovino; Dario Roccatello; Savino Sciascia; Elisa Menegatti; Giuseppe Remuzzi; Erica Daina; Paraskevas Iatropoulos; Bruno Bembi; Rosalia Maria Da Riol; Alessandra Ferlini; Marcella Neri; Giuseppe Novelli; Federica Sangiuolo; Francesco Brancati; Domenica Taruscio
Journal:  Ital J Pediatr       Date:  2020-09-14       Impact factor: 2.638

10.  A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism.

Authors:  Reuben M Buckley; Brian W Davis; Wesley A Brashear; Fabiana H G Farias; Kei Kuroki; Tina Graves; LaDeana W Hillier; Milinn Kremitzki; Gang Li; Rondo P Middleton; Patrick Minx; Chad Tomlinson; Leslie A Lyons; William J Murphy; Wesley C Warren
Journal:  PLoS Genet       Date:  2020-10-22       Impact factor: 5.917

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