| Literature DB >> 31391956 |
Olívia B O Moreira1, Maria Clara R Freitas2, Karynne C Souza3, Alessandro K Jordão4, Jackson A L C Resende3.
Abstract
In the mol-ecular structure of the title compound, C10H10N4O2·H2O, the angle between the triazole and arene rings is 87.39 (5)°. The water of crystallization connects the mol-ecules in the crystal packing. The crystal structure exhibits N-H⋯O, O-H⋯O and O-H⋯N inter-actions, resulting in the formation of a three-dimensional framework. The inter-molecular inter-actions were identified and qu-anti-fied using Hirshfeld surface analysis.Entities:
Keywords: Hirshfeld surface analysis.; crystal packing; crystal structure; hydrogen bonding; triazole compounds
Year: 2019 PMID: 31391956 PMCID: PMC6658979 DOI: 10.1107/S2056989019005711
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound with anisotropic atomic displacement ellipsoids shown at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O1 | 0.94 (2) | 1.68 (3) | 2.6030 (19) | 167 (2) |
| N4—H4⋯O1 | 0.91 (2) | 2.22 (2) | 3.111 (2) | 169.2 (19) |
| O1 | 0.82 (3) | 1.99 (3) | 2.773 (2) | 159 (2) |
| O1 | 0.92 (3) | 1.88 (3) | 2.800 (2) | 172 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2A partial packing diagram showing the hydrogen-bond network along the a axis and the (12) (green) and (14) (yellow) motifs. All hydrogen atoms bonded to carbon are omitted for clarity.
Figure 3Views along the c axis showing the layers consolidated by the hydrogen-bond network: (a) a (7) chain along the b-axis direction and (b) a (9) chain along [10]. All hydrogen atoms bonded to carbon are omitted for clarity.
Figure 4Hirshfeld surface mapped with d norm.
Figure 5The fingerprint plots for the title compound.
Figure 6IR spectrum of the title compound.
Experimental details
| Crystal data | |
| Chemical formula | C10H10N4O2·H2O |
|
| 236.24 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 298 |
|
| 7.2288 (14), 6.8265 (14), 23.922 (5) |
| β (°) | 98.69 (3) |
|
| 1167.0 (4) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.10 |
| Crystal size (mm) | 0.24 × 0.20 × 0.06 |
| Data collection | |
| Diffractometer | Bruker KappaCCD |
| Absorption correction | Multi-scan ( |
|
| 0.701, 0.745 |
| No. of measured, independent and observed [ | 11378, 2207, 1559 |
|
| 0.042 |
| (sin θ/λ)max (Å−1) | 0.609 |
| Refinement | |
|
| 0.041, 0.100, 1.04 |
| No. of reflections | 2207 |
| No. of parameters | 191 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.18, −0.15 |
Computer programs: COLLECT (Bruker, 2004 ▸), DIRAX/LSQ (Duisenberg, 1992 ▸), EVALCCD (Duisenberg et al., 2003 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2016 (Sheldrick, 2015b ▸), OLEX2 (Dolomanov et al., 2009 ▸) and Mercury (Macrae et al., 2008 ▸).
| C10H10N4O2·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 11378 reflections | |
| θ = 3.1–25.2° | |
| µ = 0.10 mm−1 | |
| β = 98.69 (3)° | |
| Block, colourless | |
| 0.24 × 0.20 × 0.06 mm |
| Bruker KappaCCD diffractometer | 2207 independent reflections |
| Horizonally mounted graphite crystal monochromator | 1559 reflections with |
| Detector resolution: 9 pixels mm-1 | |
| CCD scans | θmax = 25.7°, θmin = 3.1° |
| Absorption correction: multi-scan (SADABS; Bruker, 2008) | |
| 11378 measured reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.18 e Å−3 | |
| 2207 reflections | Δρmin = −0.15 e Å−3 |
| 191 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.016 (3) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Occ. (<1) | |||||
| N1 | 0.1134 (2) | 0.5773 (2) | 0.07579 (6) | 0.0470 (4) | |
| N2 | 0.1952 (2) | 0.4253 (2) | 0.10201 (7) | 0.0490 (4) | |
| N3 | 0.0553 (2) | 0.3016 (2) | 0.11042 (6) | 0.0408 (4) | |
| N4 | 0.0956 (2) | 0.1211 (2) | 0.13675 (6) | 0.0456 (4) | |
| O1 | −0.11452 (18) | 0.8386 (2) | 0.01606 (6) | 0.0548 (4) | |
| O2 | −0.37050 (18) | 0.6983 (2) | 0.03987 (6) | 0.0626 (4) | |
| C1 | −0.2030 (3) | 0.7017 (3) | 0.04017 (7) | 0.0416 (4) | |
| C2 | −0.0763 (2) | 0.5512 (3) | 0.06831 (7) | 0.0379 (4) | |
| C3 | −0.1165 (2) | 0.3727 (2) | 0.09034 (7) | 0.0375 (4) | |
| C4 | 0.1777 (2) | 0.1351 (2) | 0.19481 (7) | 0.0387 (4) | |
| C5 | 0.3163 (3) | 0.0044 (3) | 0.21538 (9) | 0.0536 (5) | |
| C6 | 0.3937 (3) | 0.0088 (3) | 0.27196 (9) | 0.0608 (6) | |
| C7 | 0.3320 (3) | 0.1427 (3) | 0.30781 (9) | 0.0552 (6) | |
| C8 | 0.1928 (3) | 0.2721 (3) | 0.28731 (9) | 0.0575 (5) | |
| C9 | 0.1139 (3) | 0.2681 (3) | 0.23076 (8) | 0.0502 (5) | |
| C10 | −0.2922 (3) | 0.2638 (3) | 0.09330 (8) | 0.0507 (5) | |
| H10A | −0.397146 | 0.341238 | 0.076648 | 0.076* | 0.5 |
| H10B | −0.290788 | 0.142584 | 0.073046 | 0.076* | 0.5 |
| H10C | −0.302575 | 0.237247 | 0.132110 | 0.076* | 0.5 |
| H10D | −0.263193 | 0.139474 | 0.111221 | 0.076* | 0.5 |
| H10E | −0.369552 | 0.338129 | 0.114823 | 0.076* | 0.5 |
| H10F | −0.357764 | 0.243466 | 0.055760 | 0.076* | 0.5 |
| O1W | 0.3100 (2) | 0.9111 (2) | 0.05054 (6) | 0.0509 (4) | |
| H1 | −0.199 (3) | 0.926 (4) | −0.0049 (10) | 0.081 (7)* | |
| H9 | 0.022 (3) | 0.353 (3) | 0.2172 (8) | 0.058 (6)* | |
| H5 | 0.359 (3) | −0.091 (3) | 0.1907 (9) | 0.067 (6)* | |
| H6 | 0.495 (3) | −0.078 (3) | 0.2851 (9) | 0.076 (7)* | |
| H7 | 0.388 (3) | 0.149 (3) | 0.3456 (10) | 0.067 (6)* | |
| H8 | 0.139 (3) | 0.367 (4) | 0.3125 (10) | 0.083 (7)* | |
| H4 | 0.170 (3) | 0.056 (3) | 0.1157 (9) | 0.063 (6)* | |
| H1WA | 0.415 (4) | 0.876 (4) | 0.0455 (10) | 0.074 (8)* | |
| H1WB | 0.241 (4) | 0.800 (4) | 0.0552 (10) | 0.089 (8)* |
| N1 | 0.0395 (9) | 0.0483 (9) | 0.0530 (9) | 0.0066 (7) | 0.0060 (7) | 0.0148 (8) |
| N2 | 0.0410 (9) | 0.0486 (9) | 0.0570 (10) | 0.0059 (8) | 0.0067 (7) | 0.0150 (8) |
| N3 | 0.0423 (9) | 0.0390 (8) | 0.0404 (8) | 0.0054 (7) | 0.0043 (6) | 0.0064 (7) |
| N4 | 0.0573 (10) | 0.0355 (9) | 0.0431 (9) | 0.0114 (7) | 0.0046 (7) | 0.0046 (7) |
| O1 | 0.0467 (8) | 0.0527 (8) | 0.0641 (9) | 0.0101 (7) | 0.0057 (7) | 0.0233 (7) |
| O2 | 0.0394 (8) | 0.0704 (10) | 0.0785 (10) | 0.0141 (7) | 0.0102 (7) | 0.0187 (8) |
| C1 | 0.0426 (11) | 0.0450 (11) | 0.0374 (9) | 0.0082 (9) | 0.0068 (8) | 0.0011 (8) |
| C2 | 0.0361 (10) | 0.0419 (10) | 0.0355 (9) | 0.0054 (8) | 0.0051 (7) | 0.0020 (8) |
| C3 | 0.0407 (10) | 0.0403 (10) | 0.0313 (9) | 0.0053 (8) | 0.0053 (7) | −0.0019 (8) |
| C4 | 0.0390 (10) | 0.0348 (9) | 0.0428 (10) | 0.0029 (8) | 0.0080 (8) | 0.0070 (8) |
| C5 | 0.0580 (13) | 0.0519 (12) | 0.0522 (12) | 0.0201 (10) | 0.0129 (10) | 0.0078 (10) |
| C6 | 0.0533 (13) | 0.0678 (15) | 0.0594 (14) | 0.0172 (11) | 0.0027 (10) | 0.0192 (12) |
| C7 | 0.0569 (13) | 0.0638 (14) | 0.0433 (11) | −0.0076 (11) | 0.0022 (10) | 0.0109 (11) |
| C8 | 0.0658 (14) | 0.0566 (13) | 0.0506 (12) | 0.0041 (11) | 0.0107 (10) | −0.0039 (11) |
| C9 | 0.0498 (12) | 0.0487 (12) | 0.0512 (12) | 0.0146 (10) | 0.0045 (9) | 0.0020 (10) |
| C10 | 0.0478 (11) | 0.0478 (11) | 0.0557 (12) | −0.0048 (9) | 0.0053 (9) | −0.0045 (9) |
| O1W | 0.0430 (9) | 0.0445 (8) | 0.0649 (9) | 0.0073 (7) | 0.0074 (7) | 0.0108 (7) |
| N1—N2 | 1.307 (2) | C5—H5 | 0.96 (2) |
| N1—C2 | 1.367 (2) | C6—C7 | 1.373 (3) |
| N2—N3 | 1.356 (2) | C6—H6 | 0.96 (2) |
| N3—C3 | 1.352 (2) | C7—C8 | 1.372 (3) |
| N3—N4 | 1.394 (2) | C7—H7 | 0.93 (2) |
| N4—C4 | 1.429 (2) | C8—C9 | 1.387 (3) |
| N4—H4 | 0.91 (2) | C8—H8 | 1.00 (2) |
| O1—C1 | 1.314 (2) | C9—H9 | 0.90 (2) |
| O1—H1 | 0.94 (2) | C10—H10A | 0.9600 |
| O2—C1 | 1.210 (2) | C10—H10B | 0.9600 |
| C1—C2 | 1.470 (2) | C10—H10C | 0.9600 |
| C2—C3 | 1.376 (2) | C10—H10D | 0.9600 |
| C3—C10 | 1.482 (2) | C10—H10E | 0.9600 |
| C4—C5 | 1.376 (3) | C10—H10F | 0.9600 |
| C4—C9 | 1.377 (3) | O1W—H1WA | 0.82 (3) |
| C5—C6 | 1.385 (3) | O1W—H1WB | 0.92 (3) |
| N2—N1—C2 | 109.36 (14) | C6—C7—H7 | 120.2 (13) |
| N1—N2—N3 | 105.80 (14) | C7—C8—C9 | 120.5 (2) |
| C3—N3—N2 | 112.91 (14) | C7—C8—H8 | 122.1 (13) |
| C3—N3—N4 | 126.55 (15) | C9—C8—H8 | 117.3 (14) |
| N2—N3—N4 | 120.53 (14) | C4—C9—C8 | 119.66 (19) |
| N3—N4—C4 | 114.07 (14) | C4—C9—H9 | 119.7 (13) |
| N3—N4—H4 | 106.5 (13) | C8—C9—H9 | 120.6 (13) |
| C4—N4—H4 | 112.3 (14) | C3—C10—H10A | 109.5 |
| C1—O1—H1 | 111.4 (14) | C3—C10—H10B | 109.5 |
| O2—C1—O1 | 124.32 (17) | H10A—C10—H10B | 109.5 |
| O2—C1—C2 | 122.91 (17) | C3—C10—H10C | 109.5 |
| O1—C1—C2 | 112.77 (15) | H10A—C10—H10C | 109.5 |
| N1—C2—C3 | 109.33 (15) | H10B—C10—H10C | 109.5 |
| N1—C2—C1 | 120.80 (15) | C3—C10—H10D | 109.5 |
| C3—C2—C1 | 129.87 (16) | H10A—C10—H10D | 141.1 |
| N3—C3—C2 | 102.58 (14) | H10B—C10—H10D | 56.3 |
| N3—C3—C10 | 123.43 (16) | H10C—C10—H10D | 56.3 |
| C2—C3—C10 | 133.97 (16) | C3—C10—H10E | 109.5 |
| C5—C4—C9 | 119.92 (18) | H10A—C10—H10E | 56.3 |
| C5—C4—N4 | 118.51 (16) | H10B—C10—H10E | 141.1 |
| C9—C4—N4 | 121.46 (16) | H10C—C10—H10E | 56.3 |
| C4—C5—C6 | 120.0 (2) | H10D—C10—H10E | 109.5 |
| C4—C5—H5 | 120.3 (13) | C3—C10—H10F | 109.5 |
| C6—C5—H5 | 119.7 (13) | H10A—C10—H10F | 56.3 |
| C7—C6—C5 | 120.3 (2) | H10B—C10—H10F | 56.3 |
| C7—C6—H6 | 120.8 (13) | H10C—C10—H10F | 141.1 |
| C5—C6—H6 | 118.8 (13) | H10D—C10—H10F | 109.5 |
| C8—C7—C6 | 119.7 (2) | H10E—C10—H10F | 109.5 |
| C8—C7—H7 | 120.1 (13) | H1WA—O1W—H1WB | 108 (2) |
| C2—N1—N2—N3 | 0.73 (19) | N1—C2—C3—N3 | 0.32 (18) |
| N1—N2—N3—C3 | −0.55 (19) | C1—C2—C3—N3 | −179.89 (16) |
| N1—N2—N3—N4 | 178.75 (14) | N1—C2—C3—C10 | −178.06 (18) |
| C3—N3—N4—C4 | −114.38 (18) | C1—C2—C3—C10 | 1.7 (3) |
| N2—N3—N4—C4 | 66.4 (2) | N3—N4—C4—C5 | −141.88 (17) |
| N2—N1—C2—C3 | −0.69 (19) | N3—N4—C4—C9 | 41.9 (2) |
| N2—N1—C2—C1 | 179.51 (15) | C9—C4—C5—C6 | −1.1 (3) |
| O2—C1—C2—N1 | −168.96 (17) | N4—C4—C5—C6 | −177.43 (18) |
| O1—C1—C2—N1 | 10.7 (2) | C4—C5—C6—C7 | 0.3 (3) |
| O2—C1—C2—C3 | 11.3 (3) | C5—C6—C7—C8 | 0.1 (3) |
| O1—C1—C2—C3 | −169.10 (17) | C6—C7—C8—C9 | 0.2 (3) |
| N2—N3—C3—C2 | 0.13 (18) | C5—C4—C9—C8 | 1.4 (3) |
| N4—N3—C3—C2 | −179.11 (15) | N4—C4—C9—C8 | 177.62 (18) |
| N2—N3—C3—C10 | 178.74 (15) | C7—C8—C9—C4 | −1.0 (3) |
| N4—N3—C3—C10 | −0.5 (3) |
| H··· | ||||
| O1—H1···O1 | 0.94 (2) | 1.68 (3) | 2.6030 (19) | 167 (2) |
| N4—H4···O1 | 0.91 (2) | 2.22 (2) | 3.111 (2) | 169.2 (19) |
| O1 | 0.82 (3) | 1.99 (3) | 2.773 (2) | 159 (2) |
| O1 | 0.92 (3) | 1.88 (3) | 2.800 (2) | 172 (2) |