Literature DB >> 31391300

DNA probes that store mechanical information reveal transient piconewton forces applied by T cells.

Rong Ma1, Anna V Kellner2, Victor Pui-Yan Ma1, Hanquan Su1, Brendan R Deal1, Joshua M Brockman2, Khalid Salaita3,2.   

Abstract

The advent of molecular tension probes for real-time mapping of piconewton forces in living systems has had a major impact on mechanobiology. For example, DNA-based tension probes have revealed roles for mechanics in platelet, B cell, T cell, and fibroblast function. Nonetheless, imaging short-lived forces transmitted by low-abundance receptors remains a challenge. This is a particular problem for mechanoimmunology where ligand-receptor bindings are short lived, and a few antigens are sufficient for cell triggering. Herein, we present a mechanoselection strategy that uses locking oligonucleotides to preferentially and irreversibly bind DNA probes that are mechanically strained over probes at rest. Thus, infrequent and short-lived mechanical events are tagged. This strategy allows for integration and storage of mechanical information into a map of molecular tension history. Upon addition of unlocking oligonucleotides that drive toehold-mediated strand displacement, the probes reset to the real-time state, thereby erasing stored mechanical information. As a proof of concept, we applied this strategy to study OT-1 T cells, revealing that the T cell receptor (TCR) mechanically samples antigens carrying single amino acid mutations. Such events are not detectable using conventional tension probes. Each mutant peptide ligand displayed a different level of mechanical sampling and spatial scanning by the TCR that strongly correlated with its functional potency. Finally, we show evidence that T cells transmit pN forces through the programmed cell death receptor-1 (PD1), a major target in cancer immunotherapy. We anticipate that mechanical information storage will be broadly useful in studying the mechanobiology of the immune system.

Entities:  

Keywords:  PD1; TCR; receptor mechanics; tension sensor

Mesh:

Substances:

Year:  2019        PMID: 31391300      PMCID: PMC6708336          DOI: 10.1073/pnas.1904034116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Characterization of the ovalbumin-specific TCR transgenic line OT-I: MHC elements for positive and negative selection.

Authors:  S R Clarke; M Barnden; C Kurts; F R Carbone; J F Miller; W R Heath
Journal:  Immunol Cell Biol       Date:  2000-04       Impact factor: 5.126

2.  Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins.

Authors:  Michael T Woodside; William M Behnke-Parks; Kevan Larizadeh; Kevin Travers; Daniel Herschlag; Steven M Block
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-10       Impact factor: 11.205

3.  Subcellular dynamics of T cell immunological synapses and kinapses in lymph nodes.

Authors:  Georges A Azar; Fabrice Lemaître; Ellen A Robey; Philippe Bousso
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-04       Impact factor: 11.205

4.  Kinetics and dynamics of DNA hybridization.

Authors:  Yandong Yin; Xin Sheng Zhao
Journal:  Acc Chem Res       Date:  2011-06-30       Impact factor: 22.384

5.  Visualizing mechanical tension across membrane receptors with a fluorescent sensor.

Authors:  Daniel R Stabley; Carol Jurchenko; Stephen S Marshall; Khalid S Salaita
Journal:  Nat Methods       Date:  2011-10-30       Impact factor: 28.547

6.  The kinetics of two-dimensional TCR and pMHC interactions determine T-cell responsiveness.

Authors:  Jun Huang; Veronika I Zarnitsyna; Baoyu Liu; Lindsay J Edwards; Ning Jiang; Brian D Evavold; Cheng Zhu
Journal:  Nature       Date:  2010-03-31       Impact factor: 49.962

Review 7.  T-cell activation through immunological synapses and kinapses.

Authors:  Michael L Dustin
Journal:  Immunol Rev       Date:  2008-02       Impact factor: 12.988

8.  Accumulation of dynamic catch bonds between TCR and agonist peptide-MHC triggers T cell signaling.

Authors:  Baoyu Liu; Wei Chen; Brian D Evavold; Cheng Zhu
Journal:  Cell       Date:  2014-04-10       Impact factor: 41.582

9.  Opposing effects of PKCtheta and WASp on symmetry breaking and relocation of the immunological synapse.

Authors:  Tasha N Sims; Timothy J Soos; Harry S Xenias; Benjamin Dubin-Thaler; Jake M Hofman; Janelle C Waite; Thomas O Cameron; V Kaye Thomas; Rajat Varma; Chris H Wiggins; Michael P Sheetz; Dan R Littman; Michael L Dustin
Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

10.  Defining single molecular forces required to activate integrin and notch signaling.

Authors:  Xuefeng Wang; Taekjip Ha
Journal:  Science       Date:  2013-05-24       Impact factor: 47.728

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  22 in total

1.  A reversible shearing DNA probe for visualizing mechanically strong receptors in living cells.

Authors:  Hongyun Li; Chen Zhang; Yuru Hu; Pengxiang Liu; Feng Sun; Wei Chen; Xinghua Zhang; Jie Ma; Wenxu Wang; Liang Wang; Piyu Wu; Zheng Liu
Journal:  Nat Cell Biol       Date:  2021-05-31       Impact factor: 28.824

2.  Extending the Capabilities of Molecular Force Sensors via DNA Nanotechnology.

Authors:  Susana M Beltrán; Marvin J Slepian; Rebecca E Taylor
Journal:  Crit Rev Biomed Eng       Date:  2020

Review 3.  Mechanosurveillance: Tiptoeing T Cells.

Authors:  Janett Göhring; Lukas Schrangl; Gerhard J Schütz; Johannes B Huppa
Journal:  Front Immunol       Date:  2022-05-26       Impact factor: 8.786

4.  A computational algorithm to assess the physiochemical determinants of T cell receptor dissociation kinetics.

Authors:  Zachary A Rollins; Jun Huang; Ilias Tagkopoulos; Roland Faller; Steven C George
Journal:  Comput Struct Biotechnol J       Date:  2022-06-25       Impact factor: 6.155

Review 5.  Insights into intercellular receptor-ligand binding kinetics in cell communication.

Authors:  Chenyi An; Xiaohuan Wang; Fan Song; Jinglei Hu; Long Li
Journal:  Front Bioeng Biotechnol       Date:  2022-06-28

6.  DNA Tension Probes to Map the Transient Piconewton Receptor Forces by Immune Cells.

Authors:  Rong Ma; Anna V Kellner; Yuesong Hu; Brendan R Deal; Aaron T Blanchard; Khalid Salaita
Journal:  J Vis Exp       Date:  2021-03-20       Impact factor: 1.355

Review 7.  Recent developments in DNA-based mechanical nanodevices.

Authors:  Qian Tian; Puspam Keshri; Mingxu You
Journal:  Chem Commun (Camb)       Date:  2022-04-12       Impact factor: 6.222

Review 8.  Bidirectional feedback between BCR signaling and actin cytoskeletal dynamics.

Authors:  Anshuman Bhanja; Ivan Rey-Suarez; Wenxia Song; Arpita Upadhyaya
Journal:  FEBS J       Date:  2021-06-30       Impact factor: 5.622

9.  Mechanically Triggered Hybridization Chain Reaction.

Authors:  Yuxin Duan; Roxanne Glazier; Alisina Bazrafshan; Yuesong Hu; Sk Aysha Rashid; Brian G Petrich; Yonggang Ke; Khalid Salaita
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-29       Impact factor: 16.823

10.  DNA-Based Microparticle Tension Sensors (μTS) for Measuring Cell Mechanics in Non-planar Geometries and for High-Throughput Quantification.

Authors:  Yuesong Hu; Victor Pui-Yan Ma; Rong Ma; Wenchun Chen; Yuxin Duan; Roxanne Glazier; Brian G Petrich; Renhao Li; Khalid Salaita
Journal:  Angew Chem Int Ed Engl       Date:  2021-06-28       Impact factor: 16.823

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