| Literature DB >> 31385471 |
Gayatri Mohanty1, Soumya Ranjan Jena1, Jasmine Nayak1, Sujata Kar2, Luna Samanta3.
Abstract
PURPOSE: To identify the paternal factors responsible for aberrant embryo development leading to loss of foetus in recurrent pregnancy loss (RPL) through proteomic analysis of ejaculated spermatozoa.Entities:
Keywords: Embryo loss; Paternal factors; Proteomics; Recurrent pregnancy loss; Spermatozoa; Two-dimensional difference gel electrophoresis
Year: 2019 PMID: 31385471 PMCID: PMC6920069 DOI: 10.5534/wjmh.190034
Source DB: PubMed Journal: World J Mens Health ISSN: 2287-4208 Impact factor: 5.400
Fig. 1Two-dimensional (2D)-difference gel electrophoresis of proteins isolated from sperm. (A) Control (labelled with Cy3). (B) Recurrent pregnancy loss group (labelled with Cy5). (C) Internal control (labelled with Cy2). (D) Overlay image. (E) Silver stained image showing the identification of 6 spots circled on the 2D gel and marked with their respective spot numbers as designated by DeCyder™ software.
Fig. 2(A) Venn diagram showing the distribution pattern of the proteins identified through two-dimensional-difference gel electrophoresis. (B) Distribution pattern of differentially expressed proteins based on protein abundance. (C) Expression profile and densitometric analysis of two key proteins (GPx4 and HSPA2) in the spermatozoa of RPL patients compared to fertile donor. RPL: recurrent pregnancy loss, GAPDH: glyceraldehyde 3-phosphate dehydrogenase. *p<0.05 with respect to control.
Differentially expressed proteins in the spermatozoa of recurrent pregnancy loss as compared to control identified using in-gel digestion of proteins
| Protein ID | Protein name | Accession No. | Mascot score | No. of matched/Total searched | Protein sequence coverage (%) | Molecular weight (Da) | Error (ppm) | Missed cleavage | Matched peptide | Unmatched peak | Fold change | Expression | Functional analysis |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GPX4 | Phospholipid hydroperoxide glutathione peroxidase, mitochondrial | P36969 | 58 | 6/40 | 61 | 868.419 | 24.1 | 0 | R.YAECGLR.I | 807.3866, 842.5181, 856.5321, 870.5512, 881.2690, 886.1635, 901.6230, 917.3032, 1001.5423, 1017.2206, 1046.0431, 1061.5614, 1077.2501, 1234.7356, 1320.6657, 1356.8051, 1365.7172, 1487.8391, 1493.8218, 1527.8390, 1598.8407, 1803.9932, 1839.0040, 2083.0739, 2094.1288, 2097.0388, 2129.1086, 2211.1438, 2225.1687, 2343.0395, 2399.0571, 2501.2326, 2584.2114, 2717.1020 | 3.47 | Overexpressed | Cellular localisation |
| 1294.746 | 65.5 | 0 | R.ILAFPCNQFGK.Q | - Nucleus, cytoplasm, mitochondria, extracellular exosome | |||||||||
| 1524.8067 | 52.7 | 0 | K.ICVNGDDAHPLWK.W | Biological process | |||||||||
| 1575.8464 | 55.9 | 1 | K.DIDGHMVNLDKYR.G | - Spermatogenesis, response to oxidative stress | |||||||||
| 1658.9339 | 50.8 | 0 | K.TEVNYTQLVDLHAR.Y | Molecular function | |||||||||
| 2110.0693 | 28.7 | 1 | K.QEPGSNEEIKEFAAGYNVK.F | - Oxido-reductase activity | |||||||||
| JIP4 | C-Junaminoterminal kinase-interacting protein 4 | O60271 | 59 | 13/43 | 16 | 881.3265 | -112.02 | 0 | R.YDEEVVK.E | 842.4951, 856.5073, 870.5331, 886.1516, 901.6158, 917.3060, 1107.5881, 1179.6458, 1193.6580, 1234.7160, 1350.7517, 1434.8149, 1487.7911, 1673.8901, 1687.9314, 1707.8239, 1791.7890, 1838.9497, 2083.0419, 2096.9825, 2225.1085, 2286.0969, 2293.9587, 2342.9727, 2383.9402, 2399.0061, 2566.1975, 2705.1099, 2717.0329, 3312.2262 | 2.73 | Overexpressed | Cellular localisation |
| 1165.6325 | 31.4 | 1 | K.AKNYADQISR.L | - Extracellular exosome | |||||||||
| 1320.6409 | -56.73 | 1 | R.LIGRYDEEVVK.E | Biological process | |||||||||
| 1365.6962 | 15 | 1 | K.YKQVTNGQGENK.M | - Spermatogenesis | |||||||||
| 1475.8162 | 105 | 1 | K.DDDDSDIPTAQRK.R | Molecular function | |||||||||
| 1493.7857 | 34.5 | 1 | K.NYADQISRLEER.E | - Protein binding | |||||||||
| 1657.8508 | -8.93 | 1 | K.FQELSQPRSHTSLK.V | ||||||||||
| 1765.781 | -142.41 | 0 | K.GIVLVALADGTLAIFHR.G | ||||||||||
| 2101.1833 | 107 | 1 | R.HTEMIHNYMEHLERTK.L+ 2 Oxidation (M) | ||||||||||
| 2211.0887 | -16.49 | 1 | K.DQISVLPNEQDLVREEAQK.M | ||||||||||
| 2291.1592 | 27.1 | 0 | K.NQEELSSLVWICTSTHSATK.V | ||||||||||
| 2501.1843 | 41.5 | 0 | -.MELEDGVVYQEEPGGSGAVMSER.V+ 2 oxidation (M) | ||||||||||
| 2584.1487 | -32.78 | 1 | K.SEVQAIIESTPELDMDKDLSGYK.G+ oxidation (M) | ||||||||||
| ZN248 | Zinc finger protein 248 | Q8NDW4 | 58 | 6/34 | 20 | 940.4691 | -67.25 | 1 | K.SALTKHQR.T | 806.3781, 842.4891, 870.5230, 881.2678, 1234.6990, 1320.6185, 1350.7203, 1365.6894, 1407.7819, 1434.8006, 1487.7944, 1493.7734, 1519.7469, 1672.8529, 1707.8052, 1791.7746, 1803.9416, 2083.0122, 2096.9809, 2103.1388, 2198.9398, 2225.0839, 2342.9922, 2425.1176, 2473.1140, 2501.1537, 2584.1504, 2705.0918 | 3.08 | Overexpressed | Cellular localisation |
| 1838.9385 | 44.4 | 1 | K.NGQGFHDEAAFFTNKR.S | - Nucleus | |||||||||
| 2211.0609 | -9.45 | 1 | K.ICDSCEMNLKNISGLIISK.K+oxidation (M) | Biological process | |||||||||
| 2399.007 | -36.31 | 1 | R.THTGEKPFICNECGKSFCVK.S | - Transcription | |||||||||
| 2528.1127 | -5.22 | 1 | K.HQIVHMGGKSYDYNENGSNFSK.K+oxidation (M) | Molecular function | |||||||||
| 2717.0256 | -69.89 | 1 | K.SNLTEHQRTHTGEKPYECNACGK.S | - Nucleic acid binding | |||||||||
| HSPA2+GSTM5 | Heat–shock related 70kDa protein 2+glutathione- stransferase Mu 5 | P54652/P46439 | 163 | 23/41 | 29+35 | 742.3472a | -41.97a | 0a | K.HWPFR.Va | 842.5066, 870.5346, 881.2682, 1320.6298, 1465.9285, 1580.8660, 1638.9042, 1771.9377, 2074.0438, 2122.0149, 2127.1584, 2211.1017, 2225.1076, 2334.2018, 2383.9475, 2399.0207, 2501.1763, 2705.0853 | 0.28 | Underexpressed | Cellular localisation |
| 856.5039b | 51.7b | 1b | K.KISAYMK.S+oxidation (M)b | - HSPA2- nucleus, mitochondria, membrane | |||||||||
| 1179.6541b | 32.7b | 1b | R.SQWLNEKFK.Lb | - GSTM5-cytoplasm | |||||||||
| 1183.6825a | 30a | 0a | K.FDLTGIPPAPR.Ga | Biological process | |||||||||
| 1197.7106b | 19.1b | 1b | K.LKLYSEFLGK.Rb | - HSPA2-spermatogenesis, protein folding | |||||||||
| 1229.7276a | 34.8a | 0a | K.DAGTITGLNVLR.Ia | - GSTM5-metabolic process | |||||||||
| 1253.6649a | 39a | 0a | R.FEELNADLFR.Ga | Molecular function | |||||||||
| 1346.7124a | 17.8a | 1a | R.MVSHLAEEFKR.Ka | - HSPA2-protein binding, ATP binding | |||||||||
| 1456.8486a | 25.3a | 0a | K.GQIQEIVLVGGSTR.Ia | - GSTM5-protein binding, transferase activity | |||||||||
| 1480.8025a | 32.6a | 1a | R.ARFEELNADLFR.Ga | ||||||||||
| 1487.7539a | 35.4a | 0a | R.TTPSYVAFTDTER.La | ||||||||||
| 1657.9233a | 0.09a | 1a | R.QATKDAGTITGLNVLR.Ia | ||||||||||
| 1687.9421b | 37.5b | 1b | R.LLLEYTDSSYVEKK.Yb | ||||||||||
| 1691.7796a | 31.9a | 0a | K.STAGDTHLGGEDFDNR.Ma | ||||||||||
| 1707.7998b | -66.81b | 1b | R.IFEPKCLDAFLNLK.Db | ||||||||||
| 1788.0271a | 20.7a | 1a | R.IINEPTAAAIAYGLDKK.Ga | ||||||||||
| 1813.0394a | 11.9a | 1a | K.LDKGQIQEIVLVGGSTR.Ia | ||||||||||
| 1819.9541a | 23.2a | 1a | K.NQVAMNPTNTIFDAKR.La | ||||||||||
| 1903.984a | 9.42a | 0a | K.VHSAVITVPAYFNDSQR.Qa | ||||||||||
| 1938.0701a | 13.3a | 1a | K.DNNLLGKFDLTGIPPAPR.Ga | ||||||||||
| 2156.08a | -3.26a | 1a | R.TTPSYVAFTDTERLIGDAAK.Na | ||||||||||
| 2763.2177b | -60.59b | 1b | K.RPWFAGDKITFVDFLAYDVLDMK.R+ oxidation (M)b | ||||||||||
| TF3C1 | General transcription factor 3C polypeptide 1 | Q12789 | 43 | 9 | 7/18 | 842.492 | -77.25 | 1 | K.SIVRLVR.N | 881.2605, 1320.6282, 1487.8178, 1493.7815, 2056.0437, 2225.1093, 2501.1727, 2651.3524, 2831.1880 | 0.44 | Underexpressed | Cellular localisation |
| 870.5361 | 60.8 | 2 | R.YFKERK.N | - Nucleus, membrane | |||||||||
| 1838.9523 | -11.47 | 0 | R.LVAMGSAWPWLLHSVR.L+ oxidation (M) | Biological process | |||||||||
| 2096.9866 | -6.62 | 2 | K.SLQPRCTMVEAFDRWGK.K+ oxidation (M) | - Transcription | |||||||||
| 2210.0795 | -28.5 | 2 | K.TGRHSSGQDKPHETYRLLK.R | Molecular function | |||||||||
| 2342.9947 | -99.41 | 2 | K.DTRASANLRPKTQPHHSTPTK.G | - Protein binding, nucleic acid binding | |||||||||
| 2399.0057 | -109.8 | 2 | R.ASANLRPKTQPHHSTPTKGGWK.V | ||||||||||
| 2584.1753 | -109.54 | 2 | R.LPTGAQQHSILLLLNRFHVDRR.S | ||||||||||
| 2872.3294 | -41.14 | 1 | R.EVVDEGLIPGDGLGAAGLDSSFYGHLKR.N | ||||||||||
| 1179.6053 | -119.32 | 1 | R.AILPALKQTPK.N | ||||||||||
| 1487.7381 | -7.23 | 1 | R.DQEATHFPKVSTK.S | ||||||||||
| 1940.8842 | -39.45 | 0 | -.MSGAGVAAGTRPPSSPTPGSR.R | ||||||||||
| 2096.9062 | -74.23 | 1 | -.MSGAGVAAGTRPPSSPTPGSRR.R | ||||||||||
| 2705.0587 | 252 | 1 | R.ASAPLGARWVCINGVWVEPGGPSPAR.L | ||||||||||
| 2716.98 | 191 | 1 | R.QRPSVGVQSLRPQSPQLRQSDPQK.R | ||||||||||
| CC74A | Coiled-coil domaincontaining protein 74A | Q96CT7 | 56 | 6/22 | 25 | 1179.6053 | -119.32 | 1 | R.AILPALKQTPK.N | 842.4895, 856.5082, 870.5299, 1045.5718, 1061.5298, 1097.5233, 1259.6726, 1657.7713, 1765.7071, 1791.7057, 2211.0244, 2225.0398, 2239.0429, 2286.0187, 2584.1023, 3312.2134 | 0.37 | Underexpressed | Unknown |
aSequences matching HSPA2. bSequences matching GSTM5.
Fig. 3Schematic representation of proposed hypothesis of involvement of oxidative stress in spermatozoa as epigenetic regulator of paternal factors in recurrent pregnancy loss (RPL). GAPDH: glyceraldehyde 3-phosphate dehydrogenase, 2D-DIGE: two-dimensional difference gel electrophoresis, MS: mass spectrometry.