Literature DB >> 31381223

Cell Fuelling and Metabolic Energy Conservation in Synthetic Cells.

Hendrik R Sikkema1, Bauke F Gaastra1, Tjeerd Pols1, Bert Poolman1.   

Abstract

We are aiming for a blue print for synthesizing (moderately complex) subcellular systems from molecular components and ultimately for constructing life. However, without comprehensive instructions and design principles, we rely on simple reaction routes to operate the essential functions of life. The first forms of synthetic life will not make every building block for polymers de novo according to complex pathways, rather they will be fed with amino acids, fatty acids and nucleotides. Controlled energy supply is crucial for any synthetic cell, no matter how complex. Herein, we describe the simplest pathways for the efficient generation of ATP and electrochemical ion gradients. We have estimated the demand for ATP by polymer synthesis and maintenance processes in small cell-like systems, and we describe circuits to control the need for ATP. We also present fluorescence-based sensors for pH, ionic strength, excluded volume, ATP/ADP, and viscosity, which allow the major physicochemical conditions inside cells to be monitored and tuned.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  bottom-up construction; cellular homeostasis; metabolic energy conservation; synthetic biochemistry; synthetic cell

Year:  2019        PMID: 31381223     DOI: 10.1002/cbic.201900398

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  5 in total

1.  ATP Recycling Fuels Sustainable Glycerol 3-Phosphate Formation in Synthetic Cells Fed by Dynamic Dialysis.

Authors:  Eleonora Bailoni; Bert Poolman
Journal:  ACS Synth Biol       Date:  2022-04-04       Impact factor: 5.249

2.  A synthetic metabolic network for physicochemical homeostasis.

Authors:  Tjeerd Pols; Hendrik R Sikkema; Bauke F Gaastra; Jacopo Frallicciardi; Wojciech M Śmigiel; Shubham Singh; Bert Poolman
Journal:  Nat Commun       Date:  2019-09-18       Impact factor: 14.919

3.  Minimal Pathway for the Regeneration of Redox Cofactors.

Authors:  Michele Partipilo; Eleanor J Ewins; Jacopo Frallicciardi; Tom Robinson; Bert Poolman; Dirk Jan Slotboom
Journal:  JACS Au       Date:  2021-11-12

Review 4.  Towards a synthetic cell cycle.

Authors:  Lorenzo Olivi; Mareike Berger; Ramon N P Creyghton; Nicola De Franceschi; Cees Dekker; Bela M Mulder; Nico J Claassens; Pieter Rein Ten Wolde; John van der Oost
Journal:  Nat Commun       Date:  2021-07-26       Impact factor: 14.919

Review 5.  Connecting primitive phase separation to biotechnology, synthetic biology, and engineering.

Authors:  Tony Z Jia; Po-Hsiang Wang; Tatsuya Niwa; Irena Mamajanov
Journal:  J Biosci       Date:  2021       Impact factor: 1.826

  5 in total

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