Literature DB >> 31376207

Genetic variability of hypoxia-inducible factor alpha (HIFA) genes in familial erythrocytosis: Analysis of the literature and genome databases.

Aleša Kristan1, Nataša Debeljak1, Tanja Kunej2.   

Abstract

Familial erythrocytosis (FE) is a congenital disorder, defined by elevated red blood cell number, hemoglobin, and hematocrit. Among eight types of FE, type 4 is caused by variants in the EPAS1 gene. Two other hypoxia-inducible factor alpha (HIFA) subunits, HIF1A and HIF3A, have not yet been associated with medical history of FE, but have potential role in the development of erythrocytosis. To improve diagnosis, it is crucial to identify new variants in genes involved in erythrocyte production. Published literature and data from genome browsers were used to obtain HIFA sequence variants associated with erythrocytosis and to locate them on protein sequence and regulatory sites. We retrieved 24 variants from the literature: 2 in HIF1A, 20 in EPAS1 and 2 in HIF3A gene. Sixteen out of 20 variants in the EPAS1 gene are positioned in a conserved region of 13 amino acids within exon 12, next to regulatory post-translational modification and binding sites, suggesting that EPAS1 has an important role in erythropoiesis. The role of HIF1A and HIF3A in the development of erythrocytosis should be further investigated.
© 2019 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  HIFA; familial erythrocytosis; genetic variability; hypoxia-inducible factor; sequence variant

Mesh:

Substances:

Year:  2019        PMID: 31376207     DOI: 10.1111/ejh.13304

Source DB:  PubMed          Journal:  Eur J Haematol        ISSN: 0902-4441            Impact factor:   2.997


  9 in total

Review 1.  Erythrocytosis: genes and pathways involved in disease development.

Authors:  Jernej Gašperšič; Aleša Kristan; Tanja Kunej; Irena Preložnik Zupan; Nataša Debeljak
Journal:  Blood Transfus       Date:  2020-12-16       Impact factor: 3.443

2.  Diagnosis and management of non-clonal erythrocytosis remains challenging: a single centre clinical experience.

Authors:  Saša Anžej Doma; Eva Drnovšek; Aleša Kristan; Martina Fink; Matjaž Sever; Helena Podgornik; Tanja Belčič Mikič; Nataša Debeljak; Irena Preložnik Zupan
Journal:  Ann Hematol       Date:  2021-05-19       Impact factor: 3.673

3.  Genetic analysis of 39 erythrocytosis and hereditary hemochromatosis-associated genes in the Slovenian family with idiopathic erythrocytosis.

Authors:  Aleša Kristan; Jernej Gašperšič; Tadeja Režen; Tanja Kunej; Rok Količ; Andrej Vuga; Martina Fink; Špela Žula; Saša Anžej Doma; Irena Preložnik Zupan; Tadej Pajič; Helena Podgornik; Nataša Debeljak
Journal:  J Clin Lab Anal       Date:  2021-02-03       Impact factor: 2.352

4.  Integrative Map of HIF1A Regulatory Elements and Variations.

Authors:  Tanja Kunej
Journal:  Genes (Basel)       Date:  2021-09-28       Impact factor: 4.096

5.  Integration and Visualization of Regulatory Elements and Variations of the EPAS1 Gene in Human.

Authors:  Aleša Kristan; Nataša Debeljak; Tanja Kunej
Journal:  Genes (Basel)       Date:  2021-11-13       Impact factor: 4.096

6.  Exposure to hypoxia causes stress erythropoiesis and downregulates immune response genes in spleen of mice.

Authors:  Haijing Wang; Daoxin Liu; Pengfei Song; Feng Jiang; Xiangwen Chi; Tongzuo Zhang
Journal:  BMC Genomics       Date:  2021-06-05       Impact factor: 3.969

7.  Identification of Variants Associated With Rare Hematological Disorder Erythrocytosis Using Targeted Next-Generation Sequencing Analysis.

Authors:  Aleša Kristan; Tadej Pajič; Aleš Maver; Tadeja Režen; Tanja Kunej; Rok Količ; Andrej Vuga; Martina Fink; Špela Žula; Helena Podgornik; Saša Anžej Doma; Irena Preložnik Zupan; Damjana Rozman; Nataša Debeljak
Journal:  Front Genet       Date:  2021-07-19       Impact factor: 4.599

8.  NGS Evaluation of a Bernese Cohort of Unexplained Erythrocytosis Patients.

Authors:  Katarzyna Aleksandra Jalowiec; Kristina Vrotniakaite-Bajerciene; Annina Capraru; Tatiana Wojtovicova; Raphael Joncourt; Alicia Rovó; Naomi A Porret
Journal:  Genes (Basel)       Date:  2021-12-04       Impact factor: 4.096

Review 9.  Congenital erythrocytosis - A condition behind recurrent thromboses: A case report and literature review.

Authors:  Saša Anžej Doma; Aleša Kristan; Nataša Debeljak; Irena Preložnik Zupan
Journal:  Clin Hemorheol Microcirc       Date:  2021       Impact factor: 2.375

  9 in total

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