Literature DB >> 31373573

A novel structurally characterized haloacid dehalogenase superfamily phosphatase from Thermococcus thioreducens with diverse substrate specificity.

Petra Havlickova1, Vitezslav Brinsa2, Jiri Brynda2, Petr Pachl2, Tatyana Prudnikova1, Jeroen R Mesters3, Barbora Kascakova1, Michal Kuty1, Marc L Pusey4, Joseph D Ng4, Pavlina Rezacova2, Ivana Kuta Smatanova1.   

Abstract

The haloacid dehalogenase (HAD) superfamily is one of the largest known groups of enzymes and the majority of its members catalyze the hydrolysis of phosphoric acid monoesters into a phosphate ion and an alcohol. Despite the fact that sequence similarity between HAD phosphatases is generally very low, the members of the family possess some characteristic features, such as a Rossmann-like fold, HAD signature motifs or the requirement for Mg2+ ion as an obligatory cofactor. This study focuses on a new hypothetical HAD phosphatase from Thermococcus thioreducens. The protein crystallized in space group P21212, with unit-cell parameters a = 66.3, b = 117.0, c = 33.8 Å, and the crystals contained one molecule in the asymmetric unit. The protein structure was determined by X-ray crystallography and was refined to 1.75 Å resolution. The structure revealed a putative active site common to all HAD members. Computational docking into the crystal structure was used to propose substrates of the enzyme. The activity of this thermophilic enzyme towards several of the selected substrates was confirmed at temperatures of 37°C as well as 60°C.

Entities:  

Keywords:  HAD superfamily; crystal structure; docking; hypothetical phosphatase; phosphatase assay

Mesh:

Substances:

Year:  2019        PMID: 31373573     DOI: 10.1107/S2059798319009586

Source DB:  PubMed          Journal:  Acta Crystallogr D Struct Biol        ISSN: 2059-7983            Impact factor:   7.652


  1 in total

1.  Engineering substrate specificity of HAD phosphatases and multienzyme systems development for the thermodynamic-driven manufacturing sugars.

Authors:  Chaoyu Tian; Jiangang Yang; Cui Liu; Peng Chen; Tong Zhang; Yan Men; Hongwu Ma; Yuanxia Sun; Yanhe Ma
Journal:  Nat Commun       Date:  2022-06-23       Impact factor: 17.694

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.