Literature DB >> 3137354

Single amino acid substitutions producing instability of globular proteins. Calculation of their frequencies in the entire mutational spectra of the alpha- and beta-subunits of human hemoglobin.

N A Kolchanov1, I N Shindyalov.   

Abstract

The frequencies of substitutions resulting in protein instability were calculated by a method estimating changes in stability produced by amino acid substitutions. The method takes into account the accessibility of an amino acid position to a solvent and changes in the specificity of amino acid interactions. When tested on human mutant hemoglobins, the method yielded predictions with a preciseness of 80%. The consideration of the evolutionary homologous proteins in the analysis allowed us to estimate the evolutionary constraints imposed on stability of their spatial structure. With these limitations, approximately 50% of amino acid substitutions in the entire mutational spectra of the alpha- and beta-subunits of human hemoglobin were found to damage the spatial structure of the globular proteins.

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Year:  1988        PMID: 3137354     DOI: 10.1007/bf02138376

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  12 in total

1.  The influence of amino acid substitutions on the conformational energy of cytochrome c.

Authors:  P K Warme
Journal:  Biochemistry       Date:  1975-08-12       Impact factor: 3.162

2.  Two types of amino acid substitutions in protein evolution.

Authors:  T Miyata; S Miyazawa; T Yasunaga
Journal:  J Mol Evol       Date:  1979-03-15       Impact factor: 2.395

3.  Predictions of backbone conformational changes in abnormal haemolgobins.

Authors:  B W Low; R D Spitz
Journal:  Nat New Biol       Date:  1972-05-31

4.  A simple method for the detection of unstable haemoglobins.

Authors:  R W Carrell; R Kay
Journal:  Br J Haematol       Date:  1972-11       Impact factor: 6.998

5.  Non-randomness of amino-acid changes in the evolution of homologous proteins.

Authors:  C J Epstein
Journal:  Nature       Date:  1967-07-22       Impact factor: 49.962

6.  Analysis of the factors and implications of an empirical method for estimating the stability of mutant human haemoglobins.

Authors:  I N Shindyalov; N A Kolchanov
Journal:  J Theor Biol       Date:  1985-11-07       Impact factor: 2.691

7.  Single amino acid substitutions influencing the folding pathway of the phage P22 tail spike endorhamnosidase.

Authors:  M H Yu; J King
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

8.  A simple method for the calculation of low energy packings of alpha-helices--a threshold approximation. I. The use of the method to estimate the effects of amino acid substitutions, deletions and insertions in globins.

Authors:  V V Solovyov; N A Kolchanov
Journal:  J Theor Biol       Date:  1984-09-07       Impact factor: 2.691

9.  Conformational changes in the globin family during evolution. 1. Analysis of the evolutionary role of insertions and deletions.

Authors:  A A Zharkikh; V V Solovyov; N A Kolchanov
Journal:  J Mol Evol       Date:  1984       Impact factor: 2.395

10.  Evolution of the amino acid substitution in the mammalian myoglobin gene.

Authors:  R A Bogardt; B N Jones; F E Dwulet; W H Garner; L D Lehman; F R Gurd
Journal:  J Mol Evol       Date:  1980-07       Impact factor: 2.395

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