Literature DB >> 31372922

An investigation on annular cartilage samples for post-mortem interval estimation using Fourier transform infrared spectroscopy.

Zhouru Li1,2, Jiao Huang2, Zhenyuan Wang3, Ji Zhang4, Ping Huang5.   

Abstract

Many attempts have been made to estimate the post-mortem interval (PMI) using bioanalytical methods based on multiple biological samples. Cartilage tissues could be used as an alternative for this purpose because their rate of degradation is slower than that of other soft tissue or biofluid samples. In this study, we applied Fourier transform infrared (FTIR) spectroscopy to acquire bioinformation from human annular cartilages within 30 days post-mortem. Principal component analysis (PCA) showed that sex and causes of death have almost no impact on the overall spectral variations caused by post-mortem changes. With pre-processing approaches, several predicted models were established using a conventional machine learning method, known as the partial least square (PLS) regression. The best model achieved a satisfactory prediction with a low error of 1.49 days using the second derivative transform of 3-point smoothing and extended multiplicative scatter correction (EMSC), and the spectral regions from proteins and carbohydrates contributed greatly to the PMI prediction. This study demonstrates the feasibility of cartilage-based FTIR analysis for PMI estimation. Further work will introduce advanced algorithms for more accurate and precise PMI prediction.

Entities:  

Keywords:  Annular cartilage; Fourier transform infrared spectroscopy; Partial least square regression; Post-mortem interval

Year:  2019        PMID: 31372922     DOI: 10.1007/s12024-019-00146-x

Source DB:  PubMed          Journal:  Forensic Sci Med Pathol        ISSN: 1547-769X            Impact factor:   2.007


  26 in total

1.  Estimating and correcting mie scattering in synchrotron-based microscopic fourier transform infrared spectra by extended multiplicative signal correction.

Authors:  A Kohler; J Sulé-Suso; G D Sockalingum; M Tobin; F Bahrami; Y Yang; J Pijanka; P Dumas; M Cotte; D G van Pittius; G Parkes; H Martens
Journal:  Appl Spectrosc       Date:  2008-03       Impact factor: 2.388

2.  Variable selection, outlier detection, and figures of merit estimation in a partial least-squares regression multivariate calibration model. A case study for the determination of quality parameters in the alcohol industry by near-infrared spectroscopy.

Authors:  Patrícia Valderrama; Jez Willian B Braga; Ronei Jesus Poppi
Journal:  J Agric Food Chem       Date:  2007-10-17       Impact factor: 5.279

Review 3.  Cartilage: a new parameter for the determination of the postmortem interval?

Authors:  Armin Alibegović
Journal:  J Forensic Leg Med       Date:  2014-08-19       Impact factor: 1.614

4.  Investigating the Postmortem Molecular Biology of Cartilage and its Potential Forensic Applications.

Authors:  Shawna N Bolton; Michael P Whitehead; Jayesh Dudhia; Timothy C Baldwin; Raul Sutton
Journal:  J Forensic Sci       Date:  2015-03-31       Impact factor: 1.832

5.  Stored human septal chondrocyte viability analyzed by confocal microscopy.

Authors:  David L Hicks; August B Sage; Barbara L Schumacher; Kyle D Jadin; Ramses M Agustin; Robert L Sah; Deborah Watson
Journal:  Arch Otolaryngol Head Neck Surg       Date:  2006-10

6.  Protein structure by Fourier transform infrared spectroscopy: second derivative spectra.

Authors:  H Susi; D M Byler
Journal:  Biochem Biophys Res Commun       Date:  1983-08-30       Impact factor: 3.575

7.  FTIR microscopic imaging of collagen and proteoglycan in bovine cartilage.

Authors:  N P Camacho; P West; P A Torzilli; R Mendelsohn
Journal:  Biopolymers       Date:  2001       Impact factor: 2.505

8.  Postmortem degradation of porcine articular cartilage.

Authors:  Christopher J Rogers; Kirsty Clark; Barbara J Hodson; Michael P Whitehead; Raul Sutton; Wera M Schmerer
Journal:  J Forensic Leg Med       Date:  2010-12-31       Impact factor: 1.614

9.  Brain tumour differentiation: rapid stratified serum diagnostics via attenuated total reflection Fourier-transform infrared spectroscopy.

Authors:  James R Hands; Graeme Clemens; Ryan Stables; Katherine Ashton; Andrew Brodbelt; Charles Davis; Timothy P Dawson; Michael D Jenkinson; Robert W Lea; Carol Walker; Matthew J Baker
Journal:  J Neurooncol       Date:  2016-02-13       Impact factor: 4.130

10.  The development of a post-mortem interval estimation for human remains found on land in the Netherlands.

Authors:  H T Gelderman; L Boer; T Naujocks; A C M IJzermans; W L J M Duijst
Journal:  Int J Legal Med       Date:  2017-11-06       Impact factor: 2.686

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  1 in total

Review 1.  Attenuated total reflection-Fourier transform infrared spectroscopy: a universal analytical technique with promising applications in forensic analyses.

Authors:  Khaled Alkhuder
Journal:  Int J Legal Med       Date:  2022-09-01       Impact factor: 2.791

  1 in total

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