Literature DB >> 31372731

Characterization and Genome Analysis of a Novel Alteromonas Phage JH01 Isolated from the Qingdao Coast of China.

Dongxu Wang1, Yong Jiang2,3,4, Shicong Xiao1, Min Wang5,6,7, Qian Liu1, Liyang Huang1, Chenglong Xue1, Qi Wang1, Tongtong Lin1, Hongbing Shao1, Andrew McMinn8.   

Abstract

A novel Alteromonas phage JH01, with the host strain identified to be Alteromonas marina SW-47(T), was isolated from the Qingdao coast during the summer of 2017. Transmission electron microscopy analysis showed that phage JH01 can be categorized into the Siphoviridae family, with an icosahedral head of 62 ± 5 nm and a long contractile tail of 254 ± 10 nm. The bioinformatic analysis shows that this phage consists of a linear, double-stranded 46,500 bp DNA molecule with a GC content of 44.39%, and 58 ORFs with no tRNA genes. The ORFs are classified into four groups, including phage packaging, phage structure, DNA replication and regulation, and hypothetical protein. The phylogenetic tree, constructed using neighbor-joining analysis, shows that phage JH01 has altitudinal homology with some Vibrio and Pseudoalteromonas phage B8b. Comparative analysis reveals the high similarity between phage JH01 and phage B8b. Additionally, our study of phage JH01 provides useful information for further research on the interaction between Alteromonas phages and their hosts.

Entities:  

Year:  2019        PMID: 31372731     DOI: 10.1007/s00284-019-01751-3

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  8 in total

1.  Diversity and Distribution of a Novel Genus of Hyperthermophilic Aquificae Viruses Encoding a Proof-Reading Family-A DNA Polymerase.

Authors:  Marike Palmer; Brian P Hedlund; Simon Roux; Philippos K Tsourkas; Ryan K Doss; Casey Stamereilers; Astha Mehta; Jeremy A Dodsworth; Michael Lodes; Scott Monsma; Tijana Glavina Del Rio; Thomas W Schoenfeld; Emiley A Eloe-Fadrosh; David A Mead
Journal:  Front Microbiol       Date:  2020-11-12       Impact factor: 5.640

2.  Isolation and Characterization of a Novel Phage SaGU1 that Infects Staphylococcus aureus Clinical Isolates from Patients with Atopic Dermatitis.

Authors:  Yuzuki Shimamori; Ajeng K Pramono; Tomoe Kitao; Tohru Suzuki; Shin-Ichi Aizawa; Tomoko Kubori; Hiroki Nagai; Shigeki Takeda; Hiroki Ando
Journal:  Curr Microbiol       Date:  2021-02-26       Impact factor: 2.188

3.  Genome and Ecology of a Novel Alteromonas Podovirus, ZP6, Representing a New Viral Genus, Mareflavirus.

Authors:  Ziyue Wang; Fang Zhang; Yantao Liang; Kaiyang Zheng; Chengxiang Gu; Wenjing Zhang; Yundan Liu; Xinran Zhang; Hongbing Shao; Yong Jiang; Cui Guo; Hui He; Hualong Wang; Yeong Yik Sung; Wen Jye Mok; Li Lian Wong; Jianfeng He; Andrew McMinn; Min Wang
Journal:  Microbiol Spectr       Date:  2021-10-13

4.  A Novel Wide-Range Freshwater Cyanophage MinS1 Infecting the Harmful Cyanobacterium Microcystis aeruginosa.

Authors:  Shanshan Zhang; Xiaoqi He; Lei Cao; Yigang Tong; Baohua Zhao; Wenlin An
Journal:  Viruses       Date:  2022-02-20       Impact factor: 5.048

5.  A Novel Alteromonas Phage Lineage with a Broad Host Range and Small Burst Size.

Authors:  Yahui Yang; Ruijie Ma; Chen Yu; Junlei Ye; Xiaowei Chen; Long Wang; Nianzhi Jiao; Rui Zhang
Journal:  Microbiol Spectr       Date:  2022-07-11

6.  A Novel Broad Host Range Phage Infecting Alteromonas.

Authors:  Xuejin Feng; Wei Yan; Anan Wang; Ruijie Ma; Xiaowei Chen; Ta-Hui Lin; Yi-Lung Chen; Shuzhen Wei; Tao Jin; Nianzhi Jiao; Rui Zhang
Journal:  Viruses       Date:  2021-05-26       Impact factor: 5.048

7.  Alteromonas Myovirus V22 Represents a New Genus of Marine Bacteriophages Requiring a Tail Fiber Chaperone for Host Recognition.

Authors:  Rafael Gonzalez-Serrano; Matthew Dunne; Riccardo Rosselli; Ana-Belen Martin-Cuadrado; Virginie Grosboillot; Léa V Zinsli; Juan J Roda-Garcia; Martin J Loessner; Francisco Rodriguez-Valera
Journal:  mSystems       Date:  2020-06-09       Impact factor: 6.496

8.  A Novel Phage Infecting Alteromonas Represents a Distinct Group of Siphophages Infecting Diverse Aquatic Copiotrophs.

Authors:  Ruijie Ma; Jiayong Lai; Xiaowei Chen; Long Wang; Yahui Yang; Shuzhen Wei; Nianzhi Jiao; Rui Zhang
Journal:  mSphere       Date:  2021-06-09       Impact factor: 4.389

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.