| Literature DB >> 31367179 |
Veronica L Urgiles1,2, Paul Székely3,4, Diana Székely4,5,6, Nicholas Christodoulides1, Juan C Sanchez-Nivicela2,7,8, Anna E Savage1.
Abstract
In the genus Pristimantis, species are often combined into taxonomic units called species groups. The taxonomy of these groups is frequently inaccurate due to the absence of genetic data from type series and repeated misidentifications generated by high morphological resemblance between taxa. Here, we focus on the P.orestes species group, providing the first genetic assessment of P.orestes sensu stricto from individuals collected from the type locality, with a reviewed diagnosis and description of advertisement calls. We find that two lineages previously named P.orestes are genetically distinct and should be separated into two different species. Based on genetic and morphological data, we name one of these species P.cajanuma sp. nov. This new species is morphologically distinct from other members of the group by having shagreen dorsal skin, evident dorsolateral folds, broader discs on toes and fingers and pale gray ventral coloration. Additionally, P.saturninoi is placed within the P.orestes species group based on genetic data from its type series. However, we find that one of its paratypes is genetically distinct and belongs to a clade containing a new species we name P.quintanai sp. nov. This new species is morphologically distinguished by lacking a tympanic membrane and vocal sacs in males, and by having expanded discs on toes and fingers, finely tuberculated dorsal skin and irregular white or cream spots in the groin and concealed surfaces of thighs. Our findings highlight the importance of providing genetic characterization and placement from the type series in taxonomic challenging groups, such as Pristimantis. We also suggest that the diversity of species within the P.orestes group will increase as more sampling is achieved in the southern Andes of Ecuador.Entities:
Keywords: Andes; Ecuador; P.cajanuma sp. nov.; P.quintanai sp. nov.; new species; nuevas especies
Year: 2019 PMID: 31367179 PMCID: PMC6658573 DOI: 10.3897/zookeys.864.35102
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Species of included in this analysis. For each specimen, we provide the museum number, source, locality and GenBank accession number. (*) indicates the outgroup taxa. Museum abbreviations are as follows: MZUA (Museo de Zoología-Universidad del Azuay, Ecuador), MUTPL (Museo de Zoología, Universidad Técnica Particular de Loja, Ecuador), MEPN (Museo de Historia Natural de la Escuela Politecnica Nacional, Ecuador), KU (Kansas Museum of Natural History, USA), QCAZ (Museo de Zoología-Pontificia Universidad Católica del Ecuador, Ecuador), DHMECN (Departamento de Herpetologia, Instituto Nacional de Biodiversidad del Ecuador, Ecuador).
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| QCAZ45661 | – |
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| Ecuador: Zamora Chinchipe, Tapichalaca Reserve |
| QCAZ45534 | – |
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| Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
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| QCAZ46744 | – |
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| Ecuador: Cañar, Reserva Mazar |
| QCAZ46708 | – |
| – | Ecuador: Cañar, Reserva Mazar | |
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| MUTPL160 |
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| – | Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail |
| MUTPL157 |
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| – | Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail | |
| MUTPL158 |
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| Ecuador: Loja, Cajanuma, Podocarpus National Park, Los Miradores Trail | |
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| KU212216 |
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| – | Peru: Cajamarca, Chota, 12 km W Llama |
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| KU177638 |
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| – | Ecuador: Carchi, Maldonado |
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| KU217863 |
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| – | Ecuador: Azuay, 4 km W Laguna Torcadorn |
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| KU221999 |
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| – | Peru: Loreto, Teniente Lopez |
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| QCAZ32368 |
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| Ecuador: Zamora Chinchipe, El Pangui |
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| KU215476 |
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| – | Peru: Madre de Dios, Cuzco Amazonico, 15 km E Puerto Maldonado |
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| QCAZ27559 | – |
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| Ecuador: Cañar, Reserva Mazar, La Libertad |
| QCAZ27572 |
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| Ecuador: Cañar, Reserva Mazar, La Libertad | |
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| MHNSM56846 |
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| – | Peru: Amazonas, N. Slobe Abra Barro Negro, 28 km SSW Leimebambe |
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| MEPN14737 | – |
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| Ecuador: Zamora Chinchipe, Cerro Plateado |
| MEPN14722 | – |
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| Ecuador: Zamora Chinchipe, Cerro Plateado | |
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| KU218257 |
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| – | Ecuador: Azuay, 7 km E Sigsig |
| QCAZ45464 |
| – | – | Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
| QCAZ45646 |
| – | – | Ecuador: Loja, Podocarpus National Park, guardianía Cajanuma | |
| MUTPL242 |
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| Ecuador, Loja, 11 km NE Urdaneta | ||
| MUTPL248 |
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| Ecuador, Loja, 11 km NE Urdaneta | |
| MUTPL249 |
| – | Ecuador, Loja, 11 km NE Urdaneta | ||
| MZUA.AN.2488 |
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| Ecuador, Loja, 11 km NE Urdaneta | ||
| QCAZ45556 | – |
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| Ecuador: Loja, Podocarpus National Park, Lagunas del Compadre | |
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| KU177821 |
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| – | Ecuador: Pichincha |
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| KU218025 |
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| – | Ecuador: Chimborazo, 70 km W Riobamba via Pallatanga |
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| MZUA.AN.1748 | – |
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| Ecuador: Cañar, Rivera |
| MZUA.AN.1881 |
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| Ecuador: Cañar, Comunidad Guangras | |
| MZUA.AN.1878 |
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| – | Ecuador: Cañar, Guangras | |
| MZUA.AN.2705 |
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| Ecuador: Cañar, Llavircay | |
| MZUA.AN.1900 |
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| Ecuador: Cañar, Llavircay | |
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| KU219788 |
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| – | Peru: Piura, Le Tambo |
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| DHMECN 12237 |
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| – | Ecuador: Morona–Santiago, Sangay National Park |
| DHMECN 12232 |
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| – | Ecuador: Morona–Santiago, Sangay National Park | |
| DHMECN 12214 |
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| – | Ecuador: Morona–Santiago, Sangay National Park | |
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| QCAZ56567 |
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| Ecuador: Bolívar, Bosque Protector Cashca Totoras | |
| KU218254 |
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| – | Ecuador: Bolívar, Bosque Protector Cashca Totoras | |
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| KU212350 |
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| – | Peru: Cajamarca, S slope Abra Quilsh, 28 km NNW Cajamarca |
| QCAZ56535 | – |
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| Ecuador: Azuay, Laguna Patococha | |
| DHMECN3112 | – |
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| Ecuador: Zamora Chinchipe, Reserva Tapichalaca | |
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| KU218052 |
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| – | Ecuador: Morona–Santiago, 10.6 km W Plan de Milogio |
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| MUTPL239 |
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| Ecuador: Loja, 21 km E Urdaneta |
| MUTPL247 |
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| Ecuador: Loja, 14 km E Urdaneta | |
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| KU218057 |
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| Ecuador: Imbabura, 35 km E Pquela |
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| KU218210* |
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| Ecuador: Morona–Santiago, Yangana |
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| CVULA7073* | EU186691 |
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| Venezuela: Sucre, Parque Nacional de Paria, Les Melenas, Peninsula de Paria |
Figure 1.Bayesian phylogeny of the species group based on 2393 base pairs of concatenated DNA from 12S, 16S, and RAG-1 gene fragments. Bayesian posterior probability support values are shown for each node, except when they are less than 0.70. Bolded names represent new sequences obtained in this study. Colored bars represent the following species: sp. nov. (yellow), (dark red), (blue) and sp. nov. (green). We rooted the tree with and . Names in gray represent closely related clades of the species group based on the phylogeny of Padial et al. (2014). Photographs of the new species and are shown.
Genetic uncorrected pairwise distances (%) among clades of the species group. Numbers at the top of the table correspond to the first column. The number of individuals for each comparison is shown above the diagonal. Bold numbers correspond to intraspecific genetic distances.
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. |
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| 2. | 0.06 |
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| 3. | 0.05 | 0.06 |
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| 4. | 0.06 | 0.06 | 0.06 | – | ||||||||||
| 5. | 0.05 | 0.07 | 0.05 | 0.02 |
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| 6. | 0.07 | 0.06 | 0.07 | 0.07 | 0.07 |
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| 7. | 0.05 | 0.06 | 0.05 | 0.05 | 0.05 | 0.07 |
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| 8. | 0.07 | 0.06 | 0.07 | 0.08 | 0.08 | 0.07 | 0.07 |
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| 9. | 0.06 | 0.08 | 0.06 | 0.07 | 0.08 | 0.09 | 0.07 | 0.08 |
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| 10. | 0.06 | 0.07 | 0.03 | 0.06 | 0.06 | 0.08 | 0.05 | 0.07 | 0.05 |
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| 11. | 0.05 | 0.06 | 0.04 | 0.07 | 0.07 | 0.08 | 0.05 | 0.07 | 0.05 | 0.02 | – | |||
| 12. | 0.05 | 0.05 | 0.07 | 0.07 | 0.07 | 0.07 | 0.05 | 0.06 | 0.06 | 0.05 | 0.06 | – | ||
| 13. | 0.08 | 0.09 | 0.10 | 0.10 | 0.11 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | 0.09 | 0.10 |
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| 14. | 0.08 | 0.09 | 0.10 | 0.09 | 0.10 | 0.10 | 0.08 | 0.09 | 0.09 | 0.09 | 0.09 | 0.09 | 0.07 | – |
Figure 2.variation in life. A MZUA.AN.2488, profile and ventral view B MZUA.AN.2493, profile view C MZUA.AN.2497, profile and ventral view.
Measurements (in mm) of adult males and females of collected from Urdaneta. The mean and standard deviation (SD) of each morphological character are shown for males (N = 5) but not females due to sample size (N = 1). Abbreviations of the morphometric measurements are presented in Materials and methods.
| MZUA 2488 ♀ | MZUA 2493 ♂ | MZUA 2497 ♂ | MUTPL 242 ♂ | MUTPL 248 ♂ | MUTPL 249 ♂ | Mean ± SD (range) ♂ | |
|---|---|---|---|---|---|---|---|
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| 22.4 | 20.0 | 16.5 | 20.7 | 20.8 | 22.3 | 20.1 ± 2.2 (16.5–22.3) |
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| 2.2 | 1.7 | 1.5 | 1.7 | 1.7 | 1.8 | 1.7 ± 0.1 (1.5–1.8) |
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| 1.5 | 0.9 | 0.8 | 1.2 | 1.3 | 1.4 | 1.1 ± 0.3 (0.7–1.4) |
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| 2.5 | 2.3 | 2.0 | 2.4 | 2.4 | 2.5 | 2.3 ± 0.2 (2.0–2.5) |
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| 1.8 | 1.8 | 1.4 | 1.6 | 1.8 | 2.0 | 1.7 ± 0.2 (1.4–2.0) |
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| 3.1 | 2.4 | 2.2 | 2.9 | 2.9 | 3.1 | 2.7 ± 0.4 (2.2–3.1) |
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| 1.8 | 1.8 | 1.4 | 1.9 | 1.6 | 2.1 | 1.8 ± 0.3 (1.4–2.1) |
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| 6.7 | 5.5 | 6.1 | 7.4 | 7.4 | 7.6 | 6.8 ± 0.9 (5.5–7.6) |
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| 6.5 | 8.3 | 6.8 | 7.7 | 7.5 | 7.9 | 7.6 ± 0.6 (6.8–8.3) |
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| 9.2 | 9.0 | 8.2 | 9.0 | 9.0 | 9.4 | 8.9 ± 0.4 (8.2–9.4) |
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| 8.2 | 8.3 | 7.8 | 8.7 | 8.7 | 8.9 | 8.5 ± 0.4 (7.8–8.9) |
Figure 3.Advertisement call of . A Oscillogram of a 12-call section of the call series B Oscillogram of a single call C Spectogram of a single call D Power spectrum of a single call.
Figure 4.Map of southern Ecuador showing recording localities of sp. nov., , and sp. nov.
Figure 5.Holotype of sp. nov. in life. A dorsolateral view B ventral view.
Figure 6.Holotype of sp. nov. in preservative, adult female MUTPL 346: A dorsal view B ventral view C lateral view.
Figure 7.Holotype of sp. nov. in preservative, adult female MUTPL 346: A dorsal view of head B profile view of head C palmar surfaces D plantar surfaces.
Figure 8.Color variation of sp. nov. in life. A–E females: A MUTPL 343 B MUTPL 591 C MUTPL 347 D MUTPL 583 E MUTPL 584; F–H juveniles: F MUTPL 345 G MUTPL 588 H MUTPL 592 I–L males: I MUTPL 353 J MUTPL 352 K MUTPL 355 L MUTPL 594.
Figure 9.Morphological differences between sensu stricto (A, C, E) and sp. nov. (B, D, F): whitish gray iris (A) vs. bronze iris (B) dorsolateral folds absent (C) vs. dorsolateral folds present (D); and limited black coloration in the groin and concealed surfaces of shanks (E) vs. widespread black coloration (F).
Measurements (in mm) of adult males and females of sp. nov. Mean and standard deviation (SD) values of each morphological character are shown for females (N = 8) and males (N = 5). Abbreviations of the morphometric measurements are presented in Materials and methods.
| MUTPL | Mean ± SD (range) ♀ | Mean ± SD (range) ♂ | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 343 ♀ | 346 ♀ | 347 ♀ | 573 ♀ | 583 ♀ | 584 ♀ | 589 ♀ | 591 ♀ | 352 ♂ | 353 ♂ | 355 ♂ | 593 ♂ | 594 ♂ | |||
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| 20.7 | 20.6 | 22.0 | 18.5 | 22.1 | 18.4 | 18.1 | 17.6 | 14.4 | 14.9 | 16.1 | 16.4 | 15.2 | 19.8 ± 1.8 (17.6–22.1) | 15.4 ± 0.8 (14.4–16.4) |
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| 1.7 | 1.8 | 1.7 | 1.7 | 1.7 | 1.6 | 1.6 | 1.6 | 1.3 | 1.3 | 1.3 | 1.3 | 1.3 | 1.7 ± 0.1 (1.6–1.8) | 1.3 (1.3) |
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| 1.1 | 1.2 | 1.2 | 0.9 | 1.2 | 0.8 | 0.9 | 0.9 | 0.7 | 0.9 | 0.9 | 0.8 | 0.7 | 1.1 ± 0.7 (0.8–1.2) | 0.8 ± 0.1 (0.7–0.9) |
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| 2.3 | 2.3 | 2.4 | 2.3 | 2.5 | 2.2 | 2.2 | 2.2 | 1.9 | 2.0 | 2.1 | 1.9 | 1.7 | 2.3 ± 0.1 (2.2–2.5) | 1.9 ± 0.1 (1.7–2.1) |
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| 1.5 | 1.5 | 1.6 | 1.2 | 1.7 | 1.4 | 1.2 | 1.3 | 1.2 | 1.2 | 1.3 | 1.2 | 1.2 | 1.4 ± 0.2 (1.2–1.7) | 1.2 ± 0.1 (1.2–1.3) |
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| 2.5 | 2.4 | 2.5 | 2.4 | 2.5 | 2.2 | 2.4 | 2.1 | 1.7 | 1.8 | 2.0 | 2.0 | 1.9 | 2.4 ± 0.2 (2.1–2.5) | 1.9 ± 0.1 (1.7–2.0) |
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| 1.8 | 1.7 | 1.9 | 1.7 | 2.0 | 1.7 | 1.7 | 1.7 | 1.4 | 1.5 | 1.6 | 1.6 | 1.6 | 1.8 ± 0.1 (1.7–2.0) | 1.5 ± 0.1 (1.4–1.6) |
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| 6.8 | 6.9 | 7.6 | 5.8 | 7.5 | 5.8 | 5.8 | 5.7 | 5.2 | 5.4 | 5.7 | 5.7 | 5.3 | 6.5 ± 0.8 (5.7–7.6) | 5.5 ± 0.2 (5.2–5.7) |
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| 7.5 | 7.5 | 8.1 | 6.5 | 7.8 | 6.9 | 6.7 | 6.3 | 4.9 | 5.2 | 5.6 | 5.9 | 5.7 | 7.2 ± 0.7 (6.3–8.1) | 5.5 ± 0.4 (4.9–5.9) |
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| 10.5 | 10.2 | 10.7 | 9.5 | 10.8 | 9.3 | 9.2 | 9.1 | 7.3 | 7.7 | 8.0 | 8.0 | 7.9 | 9.9 ± 0.7 (9.1–10.8) | 7.8 ± 0.3 (7.3–8.0) |
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| 9.1 | 9.0 | 9.6 | 8.9 | 10.2 | 8.9 | 8.4 | 8.2 | 6.8 | 7.4 | 7.6 | 7.5 | 7.4 | 9.1 ± 0.6 (8.2–10.2) | 7.3 ± 0.3 (6.8–7.6) |
Figure 10.Holotype of sp. nov. in life.
Figure 11.Holotype of sp. nov. in preservative, adult female MZUA.AN.1881. A dorsal view B ventral view C profile view.
Figure 12.Holotype of sp. nov. in preservative, adult female MZUA.AN.1881. A head in dorsal view B head in profile view C palmar surfaces D plantar surfaces.
Measurements (in mm) of adult males and females of sp. nov. The mean, standard deviation (SD) and range of each morphological character are shown for females (N = 6). The mean of each character is show for males (N = 2). Abbreviations of the morphometric measurements are presented in Materials and methods.
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| 20.2 | 20.7 | 20.6 | 21.8 | 19.0 | 20.6 | 15.5 | 16.4 | 20.5 ± 0.9 (19.0–21.8) | 16.0 |
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| 1.3 | 1.2 | 1.7 | 1.9 | 1.7 | 1.6 | 1.0 | 1.1 | 1.6 ± 0.3 (1.2–1.9) | 1.1 |
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| 1.4 | 1.4 | 1.1 | 1.1 | 1.1 | 1.1 | 0.8 | 0.9 | 1.2 ± 0.2 (1.1–1.4) | 0.9 |
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| 2.2 | 2.2 | 2.1 | 2.1 | 2.0 | 2.1 | 1.7 | 1.7 | 2.1 ± 0.1 (2.0–2.2) | 1.7 |
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| 1.5 | 1.7 | 1.4 | 1.8 | 1.6 | 1.6 | 1.0 | 1.3 | 1.6 ± 0.1 (1.5–1.8) | 1.2 |
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| 2.6 | 2.4 | 2.8 | 3.0 | 2.5 | 2.5 | 1.9 | 2.0 | 2.6 ± 0.2 (2.4–3.0) | 2.0 |
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| 1.8 | 2.0 | 2.0 | 2.0 | 1.7 | 1.8 | 1.4 | 1.7 | 1.9 ± 0.1 (1.8-–.0) | 1.6 |
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| 6.3 | 6.5 | 6.5 | 7.0 | 5.9 | 6.2 | 4.5 | 4.8 | 6.4 ± 0.4 (5.9–6.5) | 4.7 |
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| 7.2 | 7.4 | 7.5 | 7.8 | 6.8 | 7.2 | 5.6 | 5.8 | 7.3 ± 0.3 (6.8–7.0) | 5.7 |
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| 8.8 | 9.0 | 9.4 | 9.5 | 8.8 | 8.9 | 7.0 | 7.4 | 9.1 ± 0.3 (8.8–9.5) | 7.2 |
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| 8.5 | 7.7 | 8.5 | 8.9 | 8.4 | 8.7 | 6.5 | 7.2 | 8.5 ± 0.4 (7.7–8.9) | 6.9 |
Figure 13.Morphological variation of sp. nov. in live. A MZUA.AN.1900, profile and dorsal view B MZUA.AN.1880, profile and ventral view C MZUA.AN.2705, profile view.