Literature DB >> 31366606

Physiology and Distribution of Archaeal Methanotrophs That Couple Anaerobic Oxidation of Methane with Sulfate Reduction.

S Bhattarai1, C Cassarini2,3, P N L Lens1,3.   

Abstract

In marine anaerobic environments, methane is oxidized where sulfate-rich seawater meets biogenic or thermogenic methane. In those niches, a few phylogenetically distinct microbial types, i.e., anaerobic methanotrophs (ANME), are able to grow through anaerobic oxidation of methane (AOM). Due to the relevance of methane in the global carbon cycle, ANME have drawn the attention of a broad scientific community for 4 decades. This review presents and discusses the microbiology and physiology of ANME up to the recent discoveries, revealing novel physiological types of anaerobic methane oxidizers which challenge the view of obligate syntrophy for AOM. An overview of the drivers shaping the distribution of ANME in different marine habitats, from cold seep sediments to hydrothermal vents, is given. Multivariate analyses of the abundance of ANME in various habitats identify a distribution of distinct ANME types driven by the mode of methane transport. Intriguingly, ANME have not yet been cultivated in pure culture, despite intense attempts. Further advances in understanding this microbial process are hampered by insufficient amounts of enriched cultures. This review discusses the advantages, limitations, and potential improvements for ANME laboratory-based cultivation systems.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  anaerobic oxidation of methane; anerobic methanotrophs

Mesh:

Substances:

Year:  2019        PMID: 31366606      PMCID: PMC6710461          DOI: 10.1128/MMBR.00074-18

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  163 in total

Review 1.  New perspectives on anaerobic methane oxidation.

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Journal:  Environ Microbiol       Date:  2000-10       Impact factor: 5.491

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Authors:  V J Orphan; C H House; K U Hinrichs; K D McKeegan; E F DeLong
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

3.  Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities.

Authors:  Andreas Teske; Kai-Uwe Hinrichs; Virginia Edgcomb; Alvin de Vera Gomez; David Kysela; Sean P Sylva; Mitchell L Sogin; Holger W Jannasch
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

4.  Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments.

Authors:  Victoria J Orphan; Christopher H House; Kai-Uwe Hinrichs; Kevin D McKeegan; Edward F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

5.  Methane-consuming archaebacteria in marine sediments.

Authors:  K U Hinrichs; J M Hayes; S P Sylva; P G Brewer; E F DeLong
Journal:  Nature       Date:  1999-04-29       Impact factor: 49.962

6.  The anaerobic degradation of organic matter in Danish coastal sediments: iron reduction, manganese reduction, and sulfate reduction.

Authors:  D E Canfield; B Thamdrup; J W Hansen
Journal:  Geochim Cosmochim Acta       Date:  1993-08       Impact factor: 5.010

7.  Bacteria and Archaea physically associated with Gulf of Mexico gas hydrates.

Authors:  B D Lanoil; R Sassen; M T La Duc; S T Sweet; K H Nealson
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

8.  A marine microbial consortium apparently mediating anaerobic oxidation of methane.

Authors:  A Boetius; K Ravenschlag; C J Schubert; D Rickert; F Widdel; A Gieseke; R Amann; B B Jørgensen; U Witte; O Pfannkuche
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

9.  Metabolic activity of subsurface life in deep-sea sediments.

Authors:  Steven D'Hondt; Scott Rutherford; Arthur J Spivack
Journal:  Science       Date:  2002-03-15       Impact factor: 47.728

10.  Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

Authors:  V J Orphan; K U Hinrichs; W Ussler; C K Paull; L T Taylor; S P Sylva; J M Hayes; E F Delong
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

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  14 in total

Review 1.  Innovations to culturing the uncultured microbial majority.

Authors:  William H Lewis; Guillaume Tahon; Patricia Geesink; Diana Z Sousa; Thijs J G Ettema
Journal:  Nat Rev Microbiol       Date:  2020-10-22       Impact factor: 60.633

Review 2.  Cultivation of previously uncultured microorganisms with a continuous-flow down-flow hanging sponge (DHS) bioreactor, using a syntrophic archaeon culture obtained from deep marine sediment as a case study.

Authors:  Hiroyuki Imachi; Masaru K Nobu; Masayuki Miyazaki; Eiji Tasumi; Yumi Saito; Sanae Sakai; Miyuki Ogawara; Akiyoshi Ohashi; Ken Takai
Journal:  Nat Protoc       Date:  2022-09-14       Impact factor: 17.021

3.  Progress and Challenges in Studying the Ecophysiology of Archaea.

Authors:  Panagiotis S Adam; Till L V Bornemann; Alexander J Probst
Journal:  Methods Mol Biol       Date:  2022

4.  Active lithoautotrophic and methane-oxidizing microbial community in an anoxic, sub-zero, and hypersaline High Arctic spring.

Authors:  Elisse Magnuson; Ianina Altshuler; Miguel Á Fernández-Martínez; Ya-Jou Chen; Catherine Maggiori; Jacqueline Goordial; Lyle G Whyte
Journal:  ISME J       Date:  2022-04-08       Impact factor: 11.217

5.  Expression of divergent methyl/alkyl coenzyme M reductases from uncultured archaea.

Authors:  Nana Shao; Yu Fan; Chau-Wen Chou; Shadi Yavari; Robert V Williams; I Jonathan Amster; Stuart M Brown; Ian J Drake; Evert C Duin; William B Whitman; Yuchen Liu
Journal:  Commun Biol       Date:  2022-10-20

6.  Cofactor F420: an expanded view of its distribution, biosynthesis and roles in bacteria and archaea.

Authors:  Rhys Grinter; Chris Greening
Journal:  FEMS Microbiol Rev       Date:  2021-09-08       Impact factor: 16.408

7.  Humic Substances Mediate Anaerobic Methane Oxidation Linked to Nitrous Oxide Reduction in Wetland Sediments.

Authors:  Edgardo I Valenzuela; Claudia Padilla-Loma; Nicolás Gómez-Hernández; Nguyen E López-Lozano; Sergio Casas-Flores; Francisco J Cervantes
Journal:  Front Microbiol       Date:  2020-04-15       Impact factor: 5.640

8.  Dynamic modeling of anaerobic methane oxidation coupled to sulfate reduction: role of elemental sulfur as intermediate.

Authors:  Artin Hatzikioseyian; Susma Bhattarai; Chiara Cassarini; Giovanni Esposito; Piet N L Lens
Journal:  Bioprocess Biosyst Eng       Date:  2021-02-10       Impact factor: 3.210

9.  Petunidin-Based Anthocyanin Relieves Oxygen Stress in Lactobacillus plantarum ST-III.

Authors:  Minghui Yan; Bing-Hua Wang; Xiaofei Fu; Min Gui; Guojiao Wang; Lei Zhao; Ruiying Li; Chunping You; Zhenmin Liu
Journal:  Front Microbiol       Date:  2020-07-07       Impact factor: 5.640

10.  Identification of a Redox Active Thioquinoxalinol Sulfate Compound Produced by an Anaerobic Methane-Oxidizing Microbial Consortium.

Authors:  Robert H White; Kylie D Allen; Gunter Wegener
Journal:  ACS Omega       Date:  2019-12-16
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