Literature DB >> 31365883

A seminested RT-PCR for molecular genotyping of the Brazilian BR-I Infectious Bronchitis Virus Strain (GI-11).

Ruy D Chacón1, Claudete S Astolfi-Ferreira1, Jorge L Chacón2, Luis F N Nuñez3, David I De la Torre1, Antonio J Piantino Ferreira4.   

Abstract

Infectious bronchitis (IB) is one of the avian diseases with the greatest impact on poultry farming worldwide. In Brazil, strain BR-I (GI-11) is the most prevalent in poultry flocks. The present study aimed to develop a seminested RT-PCR assay specific for the diagnosis of BR-I IBV in Brazilian samples, targeting subunit 1 of the S gene. The detection limit of this assay was 10 copies of the IBV genome. In this study, 62.24% of 572 organ pools from the 5 regions of Brazil tested positive in a 3'UTR screening, and 84.83% were typed as BR-I IBV. BR-I was detected in the respiratory, digestive and urogenital tracts in pooled samples from all Brazilian geographical regions and in all the breeding systems analyzed. Specificity and sensitivity tests as well as phylogenetic analysis successfully confirmed the expected clustering of the sequences detected by this assay with the BR-I (GI-11) group. The nested PCR described in this study represents a suitable and valuable tool in the diagnosis, epidemiology, monitoring and vaccination decisions of IBV.
Copyright © 2019. Published by Elsevier Ltd.

Entities:  

Keywords:  BR-I genotype; Chicken; Detection; GI-11; Infectious bronchitis virus; Nested PCR

Mesh:

Substances:

Year:  2019        PMID: 31365883     DOI: 10.1016/j.mcp.2019.101426

Source DB:  PubMed          Journal:  Mol Cell Probes        ISSN: 0890-8508            Impact factor:   2.365


  6 in total

1.  Detection of aves polyomavirus 1 (APyV) and beak and feather disease virus (BFDV) in exotic and native Brazilian Psittaciformes.

Authors:  Natalia A Philadelpho; Ruy D Chacón; Andrea J Diaz Forero; Marta B Guimarães; Claudete S Astolfi-Ferreira; Antonio J Piantino Ferreira
Journal:  Braz J Microbiol       Date:  2022-06-29       Impact factor: 2.214

2.  Outbreaks of Avipoxvirus Clade E in Vaccinated Broiler Breeders with Exacerbated Beak Injuries and Sex Differences in Severity.

Authors:  Ruy D Chacón; Claudete S Astolfi-Ferreira; Patrícia C Pereira; Mario S Assayag; Antony B Campos-Salazar; David De la Torre; Lilian R M de Sá; Sonia R Yokomizo de Almeida; Rose Elí Grassi Rici; Antonio J Piantino Ferreira
Journal:  Viruses       Date:  2022-04-08       Impact factor: 5.818

3.  Complete Genome Characterization of Reticuloendotheliosis Virus Detected in Chickens with Multiple Viral Coinfections.

Authors:  Ruy D Chacón; Benjy Sedano-Herrera; Elizabeth Regina Alfaro-Espinoza; Wilma Ursula Quispe; Arturo Liñan-Torres; David De la Torre; Anderson de Oliveira; Claudete S Astolfi-Ferreira; Antonio J Piantino Ferreira
Journal:  Viruses       Date:  2022-04-13       Impact factor: 5.818

Review 4.  The emergence, evolution and spread of infectious bronchitis virus genotype GI-23.

Authors:  Mohamed H Houta; Kareem E Hassan; Azza A El-Sawah; Magdy F Elkady; Walid H Kilany; Ahmed Ali; Ahmed S Abdel-Moneim
Journal:  Arch Virol       Date:  2021-01-08       Impact factor: 2.574

5.  Persistence of SARS-CoV-2 RNA in the nasopharyngeal, blood, urine, and stool samples of patients with COVID-19: a hospital-based longitudinal study.

Authors:  Farahnaz Joukar; Tofigh Yaghubi Kalurazi; Mahmoud Khoshsorour; Sonbol Taramian; Lida Mahfoozi; Heydar Ali Balou; Alireza Jafarinezhad; Aydin Pourkazemi; Ezat Hesni; Mehrnaz Asgharnezhad; Mohammad Shenagari; Issa Jahanzad; Mohammadreza Naghipour; Saman Maroufizadeh; Fariborz Mansour-Ghanaei
Journal:  Virol J       Date:  2021-07-01       Impact factor: 4.099

Review 6.  Identification of Novel Candidate Epitopes on SARS-CoV-2 Proteins for South America: A Review of HLA Frequencies by Country.

Authors:  David Requena; Aldhair Médico; Ruy D Chacón; Manuel Ramírez; Obert Marín-Sánchez
Journal:  Front Immunol       Date:  2020-09-03       Impact factor: 7.561

  6 in total

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