Literature DB >> 31359086

Versatile cell ablation tools and their applications to study loss of cell functions.

Fengming Liu1,2,3, Shen Dai1, Dechun Feng4, Xiao Peng1, Zhongnan Qin1,2,3, Alison C Kearns1, Wenfei Huang5, Yong Chen1,6, Süleyman Ergün7, Hong Wang1, Jay Rappaport8, Elizabeth C Bryda9, Anand Chandrasekhar10, Bertal Aktas11, Hongzhen Hu12, Sulie L Chang5, Bin Gao4, Xuebin Qin13,14,15.   

Abstract

Targeted cell ablation is a powerful approach for studying the role of specific cell populations in a variety of organotypic functions, including cell differentiation, and organ generation and regeneration. Emerging tools for permanently or conditionally ablating targeted cell populations and transiently inhibiting neuronal activities exhibit a diversity of application and utility. Each tool has distinct features, and none can be universally applied to study different cell types in various tissue compartments. Although these tools have been developed for over 30 years, they require additional improvement. Currently, there is no consensus on how to select the tools to answer the specific scientific questions of interest. Selecting the appropriate cell ablation technique to study the function of a targeted cell population is less straightforward than selecting the method to study a gene's functions. In this review, we discuss the features of the various tools for targeted cell ablation and provide recommendations for optimal application of specific approaches.

Entities:  

Keywords:  Animal models; Bacterial nitroreductase (NTR); Caspase; Cell interaction; Chemogenetics; Clodronate-liposome; Diphtheria toxin (DT); Human CD59; Intermedilysin (ILY); Optogenetics; Thymidine kinase (TK)

Mesh:

Substances:

Year:  2019        PMID: 31359086      PMCID: PMC6858955          DOI: 10.1007/s00018-019-03243-w

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  180 in total

1.  Microanatomical and biochemical origins of normal and precancerous cervical autofluorescence using laser-scanning fluorescence confocal microscopy.

Authors:  Ina Pavlova; Konstantin Sokolov; Rebekah Drezek; Anais Malpica; Michele Follen; Rebecca Richards-Kortum
Journal:  Photochem Photobiol       Date:  2003-05       Impact factor: 3.421

2.  Photo-inducible cell ablation in Caenorhabditis elegans using the genetically encoded singlet oxygen generating protein miniSOG.

Authors:  Yingchuan B Qi; Emma J Garren; Xiaokun Shu; Roger Y Tsien; Yishi Jin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-24       Impact factor: 11.205

3.  An improved mouse line for Cre-induced cell ablation due to diphtheria toxin A, expressed from the Rosa26 locus.

Authors:  Damian Brockschnieder; Yvonne Pechmann; Eva Sonnenberg-Riethmacher; Dieter Riethmacher
Journal:  Genesis       Date:  2006-07       Impact factor: 2.487

4.  A hemodynamic study of pulmonary hypertension in sickle cell disease.

Authors:  Florence Parent; Dora Bachir; Jocelyn Inamo; François Lionnet; Françoise Driss; Gylna Loko; Anoosha Habibi; Soumiya Bennani; Laurent Savale; Serge Adnot; Bernard Maitre; Azzedine Yaïci; Leila Hajji; Dermot S O'Callaghan; Pierre Clerson; Robert Girot; Frederic Galacteros; Gerald Simonneau
Journal:  N Engl J Med       Date:  2011-07-07       Impact factor: 91.245

Review 5.  Chemogenetic tools to interrogate brain functions.

Authors:  Scott M Sternson; Bryan L Roth
Journal:  Annu Rev Neurosci       Date:  2014-06-16       Impact factor: 12.449

6.  A method for selective ablation of neurons in C. elegans using the phototoxic fluorescent protein, KillerRed.

Authors:  Junya Kobayashi; Hisashi Shidara; Yuma Morisawa; Maki Kawakami; Yuta Tanahashi; Kohji Hotta; Kotaro Oka
Journal:  Neurosci Lett       Date:  2013-06-04       Impact factor: 3.046

Review 7.  FK506 nephrotoxicity.

Authors:  W F Finn
Journal:  Ren Fail       Date:  1999 May-Jul       Impact factor: 2.606

8.  Severity of pulmonary hypertension during vaso-occlusive pain crisis and exercise in patients with sickle cell disease.

Authors:  Roberto F Machado; A Kyle Mack; Sabrina Martyr; Christopher Barnett; Peter Macarthur; Vandana Sachdev; Inez Ernst; Lori A Hunter; Wynona A Coles; James P Nichols; Gregory J Kato; Mark T Gladwin
Journal:  Br J Haematol       Date:  2006-12-08       Impact factor: 6.998

9.  Pulmonary hypertension as a risk factor for death in patients with sickle cell disease.

Authors:  Mark T Gladwin; Vandana Sachdev; Maria L Jison; Yukitaka Shizukuda; Jonathan F Plehn; Karin Minter; Bernice Brown; Wynona A Coles; James S Nichols; Inez Ernst; Lori A Hunter; William C Blackwelder; Alan N Schechter; Griffin P Rodgers; Oswaldo Castro; Frederick P Ognibene
Journal:  N Engl J Med       Date:  2004-02-26       Impact factor: 91.245

10.  Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution.

Authors:  Xue Han; Edward S Boyden
Journal:  PLoS One       Date:  2007-03-21       Impact factor: 3.240

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  5 in total

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Authors:  Pia Rantakari; Marko Salmi; Emmi Lokka; Laura Lintukorpi; Sheyla Cisneros-Montalvo; Juho-Antti Mäkelä; Sofia Tyystjärvi; Venla Ojasalo; Heidi Gerke; Jorma Toppari
Journal:  Nat Commun       Date:  2020-09-01       Impact factor: 14.919

Review 2.  Emerging strategies for the genetic dissection of gene functions, cell types, and neural circuits in the mammalian brain.

Authors:  Ling Gong; Xue Liu; Jinyun Wu; Miao He
Journal:  Mol Psychiatry       Date:  2021-09-24       Impact factor: 15.992

3.  Kupffer cells promote T-cell hepatitis by producing CXCL10 and limiting liver sinusoidal endothelial cell permeability.

Authors:  Shen Dai; Fengming Liu; Zhongnan Qin; Jinyan Zhang; Jiayi Chen; Wen-Xing Ding; Dechun Feng; Yong Ji; Xuebin Qin
Journal:  Theranostics       Date:  2020-06-01       Impact factor: 11.556

Review 4.  SARS-CoV-2 pandemic and research gaps: Understanding SARS-CoV-2 interaction with the ACE2 receptor and implications for therapy.

Authors:  Prasun K Datta; Fengming Liu; Tracy Fischer; Jay Rappaport; Xuebin Qin
Journal:  Theranostics       Date:  2020-06-12       Impact factor: 11.556

5.  Lung Expression of Human Angiotensin-Converting Enzyme 2 Sensitizes the Mouse to SARS-CoV-2 Infection.

Authors:  Kun Han; Robert V Blair; Naoki Iwanaga; Fengming Liu; Kasi E Russell-Lodrigue; Zhongnan Qin; Cecily C Midkiff; Nadia A Golden; Lara A Doyle-Meyers; Mohammad E Kabir; Kristin E Chandler; Kellie L Cutrera; Mi Ren; Christopher J Monjure; Gabrielle Lehmicke; Tracy Fischer; Brandon Beddingfield; Alanna G Wanek; Angela Birnbaum; Nicholas J Maness; Chad J Roy; Prasun K Datta; Jay Rappaport; Jay K Kolls; Xuebin Qin
Journal:  Am J Respir Cell Mol Biol       Date:  2021-01       Impact factor: 6.914

  5 in total

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