Literature DB >> 31358765

Development of bifunctional organocatalysts and application to asymmetric total synthesis of naucleofficine I and II.

Yong-Hai Yuan1, Xue Han1, Fu-Ping Zhu1, Jin-Miao Tian2, Fu-Min Zhang1, Xiao-Ming Zhang1, Yong-Qiang Tu3,4, Shao-Hua Wang1, Xiang Guo1.   

Abstract

The proline-type organocatalysts has been efficiently employed to catalyze a wide range of asymmetric transformations; however, there are still many synthetically useful and challenging transformations that remain unachievable in an asymmetric fashion. Herein, a chiral bifunctional organocatalyst with a spirocyclic pyrrolidine backbone-derived containing fluoro-alkyl and aryl sulfonamide functionalities, are designed, prepared, and examined in the asymmetric Mannich/acylation/Wittig reaction sequence of 3,4-dihydro-β-carboline with acetaldehyde, acyl halides, and Wittig reagents. As a result, the spirocyclic pyrrolidine trifluoromethanesulfonamide catalyst can facilitate this versatile sequence as demonstrated by 18 examples displaying excellent enantioselectivity (up to 94% ee), as well as moderate to good yields (up to 54% over 3 steps). As a practical application, the asymmetric total synthesis of naucleofficine I (1a) and II (1b) in ten steps have been accomplished.

Entities:  

Year:  2019        PMID: 31358765      PMCID: PMC6662887          DOI: 10.1038/s41467-019-11382-8

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


Introduction

The metal-free organocatalysis based on the dual activation of amino acids and their analogs has been displaying versatile utilities in the synthesis of natural products and pharmaceuticals[1-5]. The proline-type organocatalysts represent a large class of useful bifunctional catalytic systems, which have facilitated a wide range of asymmetric reactions of carbonyls, imines, and their variants, including aldol, Michael addition, Diels–Alder cycloaddition, Mannich reaction, and so on[6-12]. Despite these advances, there are still many inspiring transformations that remain unachievable in asymmetric synthesis. Therefore, development of more and reliable bifunctional organocatalysts is of high demand for effecting these transformations. Aimed at the asymmetric synthesis of biologically important natural products and drug molecules, our current efforts have been focused on developing novel and effective catalysis systems to enable synthetically challenging transformations so as to explore the concise synthetic approaches. As indicated in Fig. 1, at least four kinds of different natural products, the naucleofficine I (1a) and II (1b), yohimbine, and berbanes, contain the common complex N-fused bicyclic structures 6 with multi-substituents and stereocenters. Compounds 1a and 1b are isolated from Nauclea genus and exhibit antibacterial and antiviral biological activities[13,14]. They represent the characteristic structures of a number of monoterpenoid indole alkaloids and have not been synthesized so far, although some approaches to their analogs have been reported by employing free radical cyclization and the Pictet–Spengler reaction as key steps[15-18].
Fig. 1

Design of asymmetric synthesis of monoterpenoid alkaloids. Retro-synthesis involves Diels–Alder reaction and Mannich/acylation/Wittig sequent reaction

Design of asymmetric synthesis of monoterpenoid alkaloids. Retro-synthesis involves Diels–Alder reaction and Mannich/acylation/Wittig sequent reaction In previous reports, the the spirocyclic pyrrolidine (SPD) backbone-derived organocatalysts have displayed high enantioselectivity in several reactions, possibly due to the rigid chiral environment of quaternary carbon stereocenter and spirocylic scaffold, and the flexibility of the lone electron pair of the pyrrolidine moiety[19-21]. In this regard, it is hypothesized that attachment of the strong acidic fluoroalkylsulphonamide motif to a sterically hindered SPD backbone would generate a new bifunctional catalyst, which would exhibit stronger acidity and superior enantio-induction ability compared with proline but still maintain the active pyrrolidine amine. Furthermore, the BINOL-phosphonyl TfNH catalyst (Table 1, Cat 8) exhibits much stronger acidity than BINOL-phosphoric acid alone, due to its stability of counter anion and strong electron-accepting property of Tf group[22-25]. Herein, we present our research results on the asymmetric Mannich/acylation/Wittig sequence to efficiently assemble the tetrahydro-β-carboline 5, which allows us to accomplish the total synthesis of naucleofficine I (1a) and naucleofficine II (1b) in a concise way.
Table 1

Optimization of the Mannich/Acylation/Wittig reaction conditionsa

EntryCatalystT [ºC]Additivet [h]Yield [%]bee [%]c
1Cat 10-82151
2Cat 10PhCO2H88−1.1
3Cat 10PTS812−57
4 Cat 10 Et 3 N 4 51 91
5Cat 10DMAP202987
6Cat 10DBU204786
7Cat 1−5Et3N104888
8Cat 1−10Et3N104589
9Cat 20Et3N4873
10Cat 30Et3N48128
11Cat 40Et3N48<532
12Cat 50Et3N48<518
13Cat 60Et3N48<514
14Cat 70Et3N48NDdNDd
15Cat 80Et3N301520
16Cat 90Et3N62668
17Cat 100Et3N482069
18Cat 110Et3N48<567
19Cat 120Et3N48620
20Cat 130Et3N48929

a Unless otherwise noted, all reactions were carried with 2a (0.1 mmol), acetaldehyde (0.3 mmol), catalyst (0.02 mmol), and additive (0.05 mmol), in 0.5 mL DCE and 0.5 mL H2O; after the reaction is complete, the solution was evaporated, then DCM (1 mL), K2CO3 (0.2 mmol), acyl halide 3 (0.15 mmol), and Wittig reagent 4 (0.2 mmol) was added sequentially to the reaction system

b Isolated yield over three steps

c Determined by HPLC analysis

d No reaction detectable

DBU 1,8-diazabicyclo[5.4.0]undec-7-ene, DMAP 4-dimethylaminopyridine, PTS p-toluenesulfonic acid, DCE 1,2-dichloroethane, DCM dichloromethane

Bold values represent the optimal condition

Optimization of the Mannich/Acylation/Wittig reaction conditionsa a Unless otherwise noted, all reactions were carried with 2a (0.1 mmol), acetaldehyde (0.3 mmol), catalyst (0.02 mmol), and additive (0.05 mmol), in 0.5 mL DCE and 0.5 mL H2O; after the reaction is complete, the solution was evaporated, then DCM (1 mL), K2CO3 (0.2 mmol), acyl halide 3 (0.15 mmol), and Wittig reagent 4 (0.2 mmol) was added sequentially to the reaction system b Isolated yield over three steps c Determined by HPLC analysis d No reaction detectable DBU 1,8-diazabicyclo[5.4.0]undec-7-ene, DMAP 4-dimethylaminopyridine, PTS p-toluenesulfonic acid, DCE 1,2-dichloroethane, DCM dichloromethane Bold values represent the optimal condition

Results

Design plan

The synthesis of natural products in Fig. 1 could be simplified to establishment of the single C3 stereocenter and installation of two unsaturated chains in 5. In this work, we focus on the synthesis of the alkaloids 1a and 1b, our retro-synthesis involves alternatively a late-stage O-hetero-Diels–Alder cycloaddition to construct the D/E rings with multi-functional groups and stereogenic centers in one step from the key intermediate 5 (Fig. 1). Therefore, we envision a versatile Mannich/acylation/Wittig sequence would enable the construction of 5 from commercially available 3,4-dihydro-β-carboline 2, acetaldehyde, acyl halides, and corresponding Wittig reagents. To achieve this catalytic asymmetric sequence, however, some challenges exist, including the following: (1) the starting N-aliphatic imine is relatively inactive compared with generally used active Boc-[26,27], Ts-[28,29], aryl-imine species[30,31], and Cbz-[32], which requires a stronger acidity to activate the C=N bond via hydrogen bonding; (2) the active acetaldehyde[33-39] could easily form byproducts via aldol condensation; and (3) asymmetric Mannich reaction of 3,4-dihydro-β-carboline and aldehydes is a challenging work, which has not been reported up to now, maybe due to the instability of the resulting amino aldehyde.

Reaction condition optimization

Initially, four catalysts Cat 1–4 with substituents possessing different electronic properties were prepared from (S,S)-SPD-amine (for details, see Supplementary Note 2). Imine 2a was selected as a model substrate to screen the optimal condition of the Mannich sequence with acetaldehyde, acetyl bromide, and methyl(triphenylphosphoranylidene)-acetate. Fortunately, the expected Mannich sequence could take place in the presence of Cat 1 in DCE/H2O at 0 °C, affording mainly the desired product 5a albeit with the poor yield (21% over three steps) and moderate enantiomeric excesses (ee) (51%) (Table 1, entry 1). Encouraged by this result, the effect of additives was then investigated (for details, see Supplementary Table 1). The presence of a basic additive was found to be crucial to improve the reaction outcome, with Et3N giving the best result (entry 4), the main byproducts were the decomposition of the amino aldehyde in the second step of acylation and the byproducts of aldol condensation have not been detected. In contrast, the acid additives gave poor results and reversed the chirality of the resulting products (entries 2–3 vs. 4–6). Subsequently, decreasing the reaction temperature led to slightly lower yield and ee (entries 7–8). Further examination of the analogous Cat 2–4 revealed that the TfNH modified Cat 1 provided a much better result than Cat 2–4 with the weaker and stronger electron withdrawing property of tolylsulfonyl, p-(triflouromethyl)-benzenesulfonyl, and methylsulfonyl, respectively (entries 9–11 vs. 4). In addition, other types of catalysts with quite different levels of reactivity and/or stereo-effect from Cat 1 were subjected to the reaction and compared with Cat 1 under the same condition as entry 4. These include the following: (1) Cat 5, Cat 13, which does not have an acidic functional group; (2) Cat 6, which has a protecting group of pyrrolidine amine; (3) Cat 8, which has a single, stronger acidity and generally identified excellent enatio-induction of BINOL framework; and (4) Cat 9–12[5,40-44], which have similar reactivity but quite different stereo-effect of a linear derivative. Unfortunately, all of these catalysts gave poor results (entries 12–18). Particularly, Cat 7 failed to promote this sequence and only the starting material was recovered (entry 14). These results indicated that Cat 1 exhibited both excellent reactivity and high enantio-induction ability toward the studied transformation.

Substrate scope

Subsequently, the optimal condition of entry 4 (the bold values in table 1) was employed for substrate expansion. First, a variety of substituted 3,4-dihydro-β-carbolines 2b–2j with a variety of substituents on the indole rings were examined and all reacted smoothly to afford the desired products 5b–5j (Fig. 2a)[45-49]. In detail, the EWG (electron-withdrawing group) substitutions with F, Cl, and Br at C9–C11 of the indole ring generally gave high ee (90–92%) and good yields (51–54% over three steps) (5d–5h), whereas the EDG (electron-donating group) substitutions gave slightly lower ee (88% ee) and yields (45%) (5b and 5c). Interestingly, the C12 substitutions with either EWG (5i) or EDG (5j) both gave high ee (94% and 90% ee) but merely moderate yields (43% and 37%). Moreover, substitutions at the indole nitrogen atom with the EWG (5k) or EDG (5l) resulted in similarly lower ee (83% and 76%) and varied yields (52% and 32%). In addition, variation of acyl halides could also generate high ee (both 91% ee) and moderate yields (45% and 46%) (5m and 5n), respectively. Moreover, changing the Wittig reagents gave moderate yields (42% and 40%) and high ee (both 91% ee) (5o and 5p), which were the key intermediates for the synthesis of natural products 1a/1b. Notably, two 3,4-dihydro-isoquinoline substrates were explored for the catalytic Mannich/acylation/Wittig sequence, which also proved to be effective, generating the corresponding products 5q and 5r with good ee (81% and 87%) and moderate yields (41% and 36%), respectively (Fig. 2b). As a result, the explored Cat 1 could facilitate well the expected asymmetric Mannich sequence with a wide substrate toleration in good to high efficiency in most cases.
Fig. 2

The substrate scope of the Mannich/Acylation/Wittig reaction. Reaction condition: 2a (0.1 mmol), acetaldehyde (0.3 mmol), (S,S)-Cat 1 (0.02 mmol), and Et3N (0.05 mmol), in 0.5 mL DCE and 0.5 mL H2O, then acyl halide 3 (0.15 mmol) and Wittig reagent 4 (0.2 mmol). Isolated yield over three steps. Enantiomeric excess determined by HPLC analysis. a The scope of 3,4-dihydro-β-carboline substrates. b The scope of 3,4-dihydro-isoquinoline substrates

The substrate scope of the Mannich/Acylation/Wittig reaction. Reaction condition: 2a (0.1 mmol), acetaldehyde (0.3 mmol), (S,S)-Cat 1 (0.02 mmol), and Et3N (0.05 mmol), in 0.5 mL DCE and 0.5 mL H2O, then acyl halide 3 (0.15 mmol) and Wittig reagent 4 (0.2 mmol). Isolated yield over three steps. Enantiomeric excess determined by HPLC analysis. a The scope of 3,4-dihydro-β-carboline substrates. b The scope of 3,4-dihydro-isoquinoline substrates

Asymmetric total synthesis of naucleofficine I and II

To demonstrate the utility of this sequence, the asymmetric total synthesis of 1a/1b were carried out efficiently from intermediates 5o. First, 5p underwent an O-hetero-Diels–Alder cycloaddition under reflux in mesitylene to produce the advanced pentacyclic intermediate 7 with mainly cis-configuration of C3 and C15 (Fig. 3)[50]. Next, we turned to the asymmetric total synthesis of the natural alkaloids 1a and 1b from intermediate 5o, which was readily prepared on the gram-scale from 2a using 10 mol % (R,R)-Cat 1 in 42% yield and 91% ee (Fig. 4). After extensive screening of the reaction conditions (for details, see Supplementary Table 2), ZnBr2 was found to enable the expected O-hetero-Diels–Alder cyclization of 5o, efficiently affording the pentacyclic intermediate 8 with four desired stereocenters in 51% yield and >20:1 dr (Fig. 5), and there were amount of natural products that owned trans-configuration of C3 and C15 had not been synthesized. One-recrystallization of 8 in MeOH/Et2O enhanced the enantio-purity to >99% ee (85% yield) and its absolute configuration was confirmed by X-ray crystallographic analysis (for details, see Supplementary Table 6). However, a thermal cyclization of 5o in mesitylene under refluxing temperature resulted mainly in the formation of undesired C15-epimer. Hydroformylation of 8 with POCl3/DMF afforded aldehyde 9 in 48% yield, which was treated with freshly prepared Me2CuLi to provide the separable products 10, 11, and 11′ (2.8: 2.5: 1) with 63% total yield. Fortunately, isomer 11′ could be readily converted to 11 with 85% yield when stirred in DBU (1,8-diazabicyclo[5.4.0]undec-7-ene)/DCM. Subsequent reduction of 10 with NaBH4 furnished 12 with 86% yield. After extensive investigations[51,52], protection of the hydroxyl group of 12 with hexamethyl disilylamine at refluxing temperature gave a silyl ether, which was subjected to elimination of methoxy group and removal of Boc with BF3·Et2O and TMSOTf in CH3CN to obtain acetal 14, and then the double bond isomerization to give 1a with 81% yield, so we developed an efficient method to construct the double bond of these natural products. In the same way, 1b was also synthesized separately from 11. The spectra data of synthetic (+)-1a and (−)-1b are consistent with literature[13], and the ee of (+)-1a and (−)-1b are >99% determined by chiral high-performance liquid chromatography (HPLC).
Fig. 3

Further transformation. Thermocatalytic hetero-Diels–Alder reaction mainly obtained the cis-product of C3 and C15

Fig. 4

Gram-scale synthesis of 5o. Reactions were performed with 10% mol (R,R)-Cat 1

Fig. 5

Asymmetric total synthesis of naucleofficine I and II. The key steps include O-hetero-Diels–Alder cycloaddition, hydroformylation, and double bond isomerization

Further transformation. Thermocatalytic hetero-Diels–Alder reaction mainly obtained the cis-product of C3 and C15 Gram-scale synthesis of 5o. Reactions were performed with 10% mol (R,R)-Cat 1 Asymmetric total synthesis of naucleofficine I and II. The key steps include O-hetero-Diels–Alder cycloaddition, hydroformylation, and double bond isomerization

Discussion

In summary, a chiral bifunctional organocatalyst has been successfully developed, which is a good assembly of strong acid and sterically hindered SPD framework, and thus exhibits high reactivity as well as excellent stereo-induction ability toward the asymmetric Mannich reaction of 3,4-dihydro-β-carboline with a broad substrate toleration. Furthermore, synthetic utility of this Mannich sequence has been exemplified through the asymmetric total synthesis of naucleofficine I (1a) and II (1b) in a concise way. Further expanded studies on asymmetric catalysis with our bifunctional organocatalysts toward other transformations and synthesis of other natural products are underway.

Methods

General information

All reactions requiring anhydrous conditions were carried out under argon atmosphere using oven-dried glassware (130 °C), which was cooled under argon. All solvents were purified and dried by standard techniques,and distilled prior to use. All reactions under standard conditions were monitored by thin-layer chromatography (TLC) on gel F254 plates. The products were purified by flash column chromatography on silica gel (200~300 mesh) or neutral alumina (200~300 mesh). 1H NMR, 13C NMR, and 19F NMR spectra were obtained on Bruker AM-400, JEOL JNM-ECS-400, or Varian Mercury-600. Chemical shifts (δ) were reported in p.p.m. relative to residual solvent signals (CDCl3: 7.26 p.p.m. for 1H NMR, 77.0 p.p.m. for 13C NMR; DMSO-d6: 2.50 p.p.m. for 1H NMR, 39.5 p.p.m. for 13C NMR; CD3OD: 3.31 p.p.m. for 1H NMR, 49.0 p.p.m. for 13C NMR). The following abbreviations were used to indicate the multiplicity in NMR spectra: s, singlet; d, doublet; t, triplet; m, multiplet. High-resolution mass spectral analysis data were measured on the Bruker ApexII with ESI resource. Infrared spectra were recorded on Nicolet FT-170SX spectrometer. Melting points were measured on a melting point apparatus and were uncorrected. The ee of the products were determined by HPLC analysis. X-ray diffraction data were collected on Agilent SuperNova Eos diffractometer. Optical rotations were detected on RUDOLPH A21202-J APTV/GW.

General procedure for the Mannich sequent reaction

To a solution of substituted 3,4-dihydro-β-carboline 2 (0.1 mmol), Cat 1 (5.4 mg, 0.02 mmol) in DCE/H2O (1 mL, v/v 1: 1) were added Et3N (7 µL, 0.05 mmol) and aldehyde (16 µL, 0.3 mmol) at 0 °C. The mixture was stirred at this temperature until the substrate disappeared via TLC detection. Then the resulting solution was concentrated in vacuo. Then 1 mL DCM, K2CO3 (27.6 mg, 0.2 mmol), and acetyl bromide 3a (10 µL, 0.12 mmol) were added at 0 °C sequentially. About 30 min later, 4a (66.8 mg, 0.2 mmol) was added to the reaction at room temperature and reacted at the same temperature for 12 h. The mixture was then quenched with water and the mixture was extracted with DCM. Then the combined organic phase was washed with saturated brine, dried over anhydrous Na2SO4, and concentrated in vacuo. The residue was purified through column chromatography on neutral alumina to give substrates 5.
  45 in total

1.  Theory of asymmetric organocatalysis of Aldol and related reactions: rationalizations and predictions.

Authors:  Christophe Allemann; Ruth Gordillo; Fernando R Clemente; Paul Ha-Yeon Cheong; K N Houk
Journal:  Acc Chem Res       Date:  2004-08       Impact factor: 22.384

2.  A diarylprolinol in an asymmetric, catalytic, and direct crossed-aldol reaction of acetaldehyde.

Authors:  Yujiro Hayashi; Takahiko Itoh; Seiji Aratake; Hayato Ishikawa
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  Direct organocatalytic mannich reaction of acetaldehyde: an improved catalyst and mechanistic insight from a computational study.

Authors:  Yujiro Hayashi; Tsubasa Okano; Takahiko Itoh; Tatsuya Urushima; Hayato Ishikawa; Tadafumi Uchimaru
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

4.  The design of a spiro-pyrrolidine organocatalyst and its application to catalytic asymmetric Michael addition for the construction of all-carbon quaternary centers.

Authors:  Jin-Miao Tian; Yong-Hai Yuan; Yong-Qiang Tu; Fu-Min Zhang; Xiao-Bo Zhang; Shi-Heng Zhang; Shao-Hua Wang; Xiao-Ming Zhang
Journal:  Chem Commun (Camb)       Date:  2015-06-21       Impact factor: 6.222

5.  Hybrid metal/organo relay catalysis enables enynes to be latent dienes for asymmetric Diels-Alder reaction.

Authors:  Zhi-Yong Han; Dian-Feng Chen; Ya-Yi Wang; Rui Guo; Pu-Sheng Wang; Chao Wang; Liu-Zhu Gong
Journal:  J Am Chem Soc       Date:  2012-04-09       Impact factor: 15.419

6.  Enantio- and diastereoselective Michael addition reactions of unmodified aldehydes and ketones with nitroolefins catalyzed by a pyrrolidine sulfonamide.

Authors:  Jian Wang; Hao Li; Bihshow Lou; Liansuo Zu; Hua Guo; Wei Wang
Journal:  Chemistry       Date:  2006-05-24       Impact factor: 5.236

7.  Hydrogen-bonding in aminocatalysis: from proline and beyond.

Authors:  Lukasz Albrecht; Hao Jiang; Karl Anker Jørgensen
Journal:  Chemistry       Date:  2013-12-05       Impact factor: 5.236

8.  Proline-catalysed Mannich reactions of acetaldehyde.

Authors:  Jung Woon Yang; Carley Chandler; Michael Stadler; Daniela Kampen; Benjamin List
Journal:  Nature       Date:  2008-02-20       Impact factor: 49.962

9.  Supported proline and proline-derivatives as recyclable organocatalysts.

Authors:  Michelangelo Gruttadauria; Francesco Giacalone; Renato Noto
Journal:  Chem Soc Rev       Date:  2008-06-13       Impact factor: 54.564

10.  Enantioselective formal [3+3] annulation for the direct construction of bicyclic skeletons with four stereogenic centers.

Authors:  Chun-Li Cao; Xiu-Li Sun; Yan-Biao Kang; Yong Tang
Journal:  Org Lett       Date:  2007-09-15       Impact factor: 6.005

View more
  5 in total

1.  Cu(ii)/SPDO complex catalyzed asymmetric Baeyer-Villiger oxidation of 2-arylcyclobutanones and its application for the total synthesis of eupomatilones 5 and 6.

Authors:  Chang-Sheng Zhang; Ya-Ping Shao; Fu-Min Zhang; Xue Han; Xiao-Ming Zhang; Kun Zhang; Yong-Qiang Tu
Journal:  Chem Sci       Date:  2022-06-23       Impact factor: 9.969

2.  Enantioselective, Catalytic Multicomponent Synthesis of Homoallylic Amines Enabled by Hydrogen-Bonding and Dispersive Interactions.

Authors:  Elisabetta Ronchi; Shauna M Paradine; Eric N Jacobsen
Journal:  J Am Chem Soc       Date:  2021-05-05       Impact factor: 15.419

3.  Rigid 3D-spiro chromanone as a crux for efficient antimicrobial agents: synthesis, biological and computational evaluation.

Authors:  F H Elghareeb; E M Kandil; M Abou-Elzahab; M Abdelmoteleb; M A Abozeid
Journal:  RSC Adv       Date:  2021-06-16       Impact factor: 4.036

Review 4.  Triflamides and Triflimides: Synthesis and Applications.

Authors:  Mikhail Y Moskalik; Vera V Astakhova
Journal:  Molecules       Date:  2022-08-15       Impact factor: 4.927

5.  A modular and divergent approach to spirocyclic pyrrolidines.

Authors:  Benjamin D A Shennan; Peter W Smith; Yusuke Ogura; Darren J Dixon
Journal:  Chem Sci       Date:  2020-08-07       Impact factor: 9.825

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.