Literature DB >> 31358471

R2R3 MYB Transcription Factors - Functions outside the DNA-Binding Domain.

Peter S Millard1, Birthe B Kragelund2, Meike Burow3.   

Abstract

Several transcription factor (TF) families, including the MYB family, regulate a wide array of biological processes. TFs contain DNA-binding domains (DBDs) and regulatory regions; although information on protein structure is scarce for plant MYB TFs, various in silico methods suggest that the non-MYB regions contain extensive intrinsically disordered regions (IDRs). Although IDRs do not fold into stable globular structures, they comprise functional regions including interaction motifs, and recent research has shown that IDRs perform crucial biological roles. We map here domain organization, disorder predictions, and functional regions across the entire Arabidopsis thaliana R2R3 MYB TF family, and highlight where an increased research focus will be necessary to shape a new understanding of structure-function relationships in plant TFs.
Copyright © 2019. Published by Elsevier Ltd.

Entities:  

Keywords:  MYB; intrinsic disorder; regulatory networks; short linear motifs; transcription factor

Year:  2019        PMID: 31358471     DOI: 10.1016/j.tplants.2019.07.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  29 in total

1.  IDDomainSpotter: Compositional bias reveals domains in long disordered protein regions-Insights from transcription factors.

Authors:  Peter S Millard; Katrine Bugge; Riccardo Marabini; Wouter Boomsma; Meike Burow; Birthe B Kragelund
Journal:  Protein Sci       Date:  2019-11-11       Impact factor: 6.725

2.  Insights into the Diversification and Evolution of R2R3-MYB Transcription Factors in Plants.

Authors:  Chen-Kun Jiang; Guang-Yuan Rao
Journal:  Plant Physiol       Date:  2020-04-14       Impact factor: 8.340

3.  R2R3-MYBs in Durum Wheat: Genome-Wide Identification, Poaceae-Specific Clusters, Expression, and Regulatory Dynamics Under Abiotic Stresses.

Authors:  Emanuela Blanco; Pasquale Luca Curci; Andrea Manconi; Adele Sarli; Diana Lucia Zuluaga; Gabriella Sonnante
Journal:  Front Plant Sci       Date:  2022-06-20       Impact factor: 6.627

4.  Origin and adaptive evolution of UV RESISTANCE LOCUS 8-mediated signaling during plant terrestrialization.

Authors:  Zhenhua Zhang; Chenjie Xu; Shiyu Zhang; Chen Shi; Hong Cheng; Hongtao Liu; Bojian Zhong
Journal:  Plant Physiol       Date:  2022-01-20       Impact factor: 8.005

5.  Phylogenomic Analysis of R2R3 MYB Transcription Factors in Sorghum and their Role in Conditioning Biofuel Syndrome.

Authors:  Vinay Singh; Neeraj Kumar; Anuj K Dwivedi; Rita Sharma; Manoj K Sharma
Journal:  Curr Genomics       Date:  2020-02       Impact factor: 2.236

6.  Coexpression network analysis reveals an MYB transcriptional activator involved in capsaicinoid biosynthesis in hot peppers.

Authors:  Binmei Sun; Xin Zhou; Changming Chen; Chengjie Chen; Kunhao Chen; Muxi Chen; Shaoqun Liu; Guoju Chen; Bihao Cao; Fanrong Cao; Jianjun Lei; Zhangsheng Zhu
Journal:  Hortic Res       Date:  2020-10-01       Impact factor: 6.793

7.  NtMYB305a binds to the jasmonate-responsive GAG region of NtPMT1a promoter to regulate nicotine biosynthesis.

Authors:  Shiquan Bian; Xueyi Sui; Jiahao Wang; Tian Tian; Chunkai Wang; Xue Zhao; Xiaofeng Liu; Ning Fang; Yu Zhang; Yanhua Liu; Yongmei Du; Bingwu Wang; Michael P Timko; Zhongfeng Zhang; Hongbo Zhang
Journal:  Plant Physiol       Date:  2022-01-20       Impact factor: 8.005

Review 8.  Multiple Functions of MYB Transcription Factors in Abiotic Stress Responses.

Authors:  Xiaopei Wang; Yanli Niu; Yuan Zheng
Journal:  Int J Mol Sci       Date:  2021-06-07       Impact factor: 5.923

9.  Characterization of the Poplar R2R3-MYB Gene Family and Over-Expression of PsnMYB108 Confers Salt Tolerance in Transgenic Tobacco.

Authors:  Kai Zhao; Zihan Cheng; Qing Guo; Wenjing Yao; Huajing Liu; Boru Zhou; Tingbo Jiang
Journal:  Front Plant Sci       Date:  2020-10-16       Impact factor: 5.753

10.  Systematic analysis of the Capsicum ERF transcription factor family: identification of regulatory factors involved in the regulation of species-specific metabolites.

Authors:  Jiali Song; Changming Chen; Shuanglin Zhang; Juntao Wang; Zhubing Huang; Muxi Chen; Bihao Cao; Zhangsheng Zhu; Jianjun Lei
Journal:  BMC Genomics       Date:  2020-08-24       Impact factor: 3.969

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