Literature DB >> 31356879

Replication and generalization in applied neuroimaging.

Garikoitz Lerma-Usabiaga1, Pratik Mukherjee2, Zhimei Ren3, Michael L Perry4, Brian A Wandell4.   

Abstract

There is much interest in translating neuroimaging findings into meaningful clinical diagnostics. The goal of scientific discoveries differs from clinical diagnostics. Scientific discoveries must replicate under a specific set of conditions; to translate to the clinic we must show that findings using purpose-built scientific instruments will be observable in clinical populations and instruments. Here we describe and evaluate data and computational methods designed to translate a scientific observation to a clinical setting. Using diffusion weighted imaging (DWI), Wahl et al. (2010) observed that across subjects the mean fractional anisotropy (FA) of homologous pairs of tracts is highly correlated. We hypothesize that this is a fundamental biological trait that should be present in most healthy participants, and deviations from this assessment may be a useful diagnostic metric. Using this metric as an illustration of our methods, we analyzed six pairs of homologous white matter tracts in nine different DWI datasets with 44 subjects each. Considering the original FA measurement as a baseline, we show that the new metric is between 2 and 4 times more precise when used in a clinical context. Our framework to translate research findings into clinical practice can be applied, in principle, to other neuroimaging results.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biomarker; Computational reproducibility; DWI; Generalizability; Generalization; Replication; Structural MRI; White matter tracts

Year:  2019        PMID: 31356879      PMCID: PMC6819246          DOI: 10.1016/j.neuroimage.2019.116048

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  11 in total

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2.  Structural covariance and heritability of the optic tract and primary visual cortex in living human brains.

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4.  The evolution of white matter microstructural changes after mild traumatic brain injury: A longitudinal DTI and NODDI study.

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Journal:  Sci Adv       Date:  2020-08-07       Impact factor: 14.136

5.  Concussion Disrupts Normal Brain White Matter Microstructural Symmetry.

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6.  Data-science ready, multisite, human diffusion MRI white-matter-tract statistics.

Authors:  Garikoitz Lerma-Usabiaga; Pratik Mukherjee; Michael L Perry; Brian A Wandell
Journal:  Sci Data       Date:  2020-11-30       Impact factor: 6.444

7.  Differential spatial computations in ventral and lateral face-selective regions are scaffolded by structural connections.

Authors:  Dawn Finzi; Jesse Gomez; Marisa Nordt; Alex A Rezai; Sonia Poltoratski; Kalanit Grill-Spector
Journal:  Nat Commun       Date:  2021-04-15       Impact factor: 14.919

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9.  Hybrid diffusion imaging reveals altered white matter tract integrity and associations with symptoms and cognitive dysfunction in chronic traumatic brain injury.

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Journal:  Neuroimage Clin       Date:  2021-04-21       Impact factor: 4.881

10.  The human connectome project for disordered emotional states: Protocol and rationale for a research domain criteria study of brain connectivity in young adult anxiety and depression.

Authors:  Leonardo Tozzi; Brooke Staveland; Bailey Holt-Gosselin; Megan Chesnut; Sarah E Chang; David Choi; Melissa Shiner; Hua Wu; Garikoitz Lerma-Usabiaga; Olaf Sporns; Deanna M Barch; Ian H Gotlib; Trevor J Hastie; Adam B Kerr; Russell A Poldrack; Brian A Wandell; Max Wintermark; Leanne M Williams
Journal:  Neuroimage       Date:  2020-03-05       Impact factor: 7.400

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