Literature DB >> 31356207

Longitudinal Mapping of Cortical Thickness Measurements: An Alzheimer's Disease Neuroimaging Initiative-Based Evaluation Study.

Nicholas J Tustison1,2, Andrew J Holbrook3, Brian B Avants1, Jared M Roberts2, Philip A Cook4, Zachariah M Reagh2, Jeffrey T Duda4, James R Stone1, Daniel L Gillen3, Michael A Yassa2.   

Abstract

Longitudinal studies of development and disease in the human brain have motivated the acquisition of large neuroimaging data sets and the concomitant development of robust methodological and statistical tools for quantifying neurostructural changes. Longitudinal-specific strategies for acquisition and processing have potentially significant benefits including more consistent estimates of intra-subject measurements while retaining predictive power. Using the first phase of the Alzheimer's Disease Neuroimaging Initiative (ADNI-1) data, comprising over 600 subjects with multiple time points from baseline to 36 months, we evaluate the utility of longitudinal FreeSurfer and Advanced Normalization Tools (ANTs) surrogate thickness values in the context of a linear mixed-effects (LME) modeling strategy. Specifically, we estimate the residual variability and between-subject variability associated with each processing stream as it is known from the statistical literature that minimizing the former while simultaneously maximizing the latter leads to greater scientific interpretability in terms of tighter confidence intervals in calculated mean trends, smaller prediction intervals, and narrower confidence intervals for determining cross-sectional effects. This strategy is evaluated over the entire cortex, as defined by the Desikan-Killiany-Tourville labeling protocol, where comparisons are made with the cross-sectional and longitudinal FreeSurfer processing streams. Subsequent linear mixed effects modeling for identifying diagnostic groupings within the ADNI cohort is provided as supporting evidence for the utility of the proposed ANTs longitudinal framework which provides unbiased structural neuroimage processing and competitive to superior power for longitudinal structural change detection.

Entities:  

Keywords:  Advanced normalization tools; FreeSurfer; linear mixed effects models; longitudinal processing

Mesh:

Substances:

Year:  2019        PMID: 31356207     DOI: 10.3233/JAD-190283

Source DB:  PubMed          Journal:  J Alzheimers Dis        ISSN: 1387-2877            Impact factor:   4.472


  11 in total

1.  Rates of longitudinal change in 18 F-flortaucipir PET vary by brain region, cognitive impairment, and age in atypical Alzheimer's disease.

Authors:  Jeffrey S Phillips; Frederick J Nitchie; Fulvio Da Re; Christopher A Olm; Philip A Cook; Corey T McMillan; David J Irwin; James C Gee; Jacob G Dubroff; Murray Grossman; Ilya M Nasrallah
Journal:  Alzheimers Dement       Date:  2021-09-13       Impact factor: 16.655

2.  Medial Temporal Lobe Networks in Alzheimer's Disease: Structural and Molecular Vulnerabilities.

Authors:  Robin de Flores; Sandhitsu R Das; Long Xie; Laura E M Wisse; Xueying Lyu; Preya Shah; Paul A Yushkevich; David A Wolk
Journal:  J Neurosci       Date:  2022-01-27       Impact factor: 6.709

3.  Fine Particulate Air Pollution, Early Life Stress, and Their Interactive Effects on Adolescent Structural Brain Development: A Longitudinal Tensor-Based Morphometry Study.

Authors:  Jonas G Miller; Emily L Dennis; Sam Heft-Neal; Booil Jo; Ian H Gotlib
Journal:  Cereb Cortex       Date:  2022-05-14       Impact factor: 4.861

4.  Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data.

Authors:  Joanne C Beer; Nicholas J Tustison; Philip A Cook; Christos Davatzikos; Yvette I Sheline; Russell T Shinohara; Kristin A Linn
Journal:  Neuroimage       Date:  2020-07-05       Impact factor: 6.556

5.  The ANTsX ecosystem for quantitative biological and medical imaging.

Authors:  Nicholas J Tustison; Philip A Cook; Andrew J Holbrook; Hans J Johnson; John Muschelli; Gabriel A Devenyi; Jeffrey T Duda; Sandhitsu R Das; Nicholas C Cullen; Daniel L Gillen; Michael A Yassa; James R Stone; James C Gee; Brian B Avants
Journal:  Sci Rep       Date:  2021-04-27       Impact factor: 4.379

6.  Mitigating site effects in covariance for machine learning in neuroimaging data.

Authors:  Andrew A Chen; Joanne C Beer; Nicholas J Tustison; Philip A Cook; Russell T Shinohara; Haochang Shou
Journal:  Hum Brain Mapp       Date:  2021-12-14       Impact factor: 5.038

7.  Strengths and challenges of longitudinal non-human primate neuroimaging.

Authors:  Xiaowei Song; Pamela García-Saldivar; Nathan Kindred; Yujiang Wang; Hugo Merchant; Adrien Meguerditchian; Yihong Yang; Elliot A Stein; Charles W Bradberry; Suliann Ben Hamed; Hank P Jedema; Colline Poirier
Journal:  Neuroimage       Date:  2021-03-29       Impact factor: 6.556

8.  Direct cortical thickness estimation using deep learning-based anatomy segmentation and cortex parcellation.

Authors:  Michael Rebsamen; Christian Rummel; Mauricio Reyes; Roland Wiest; Richard McKinley
Journal:  Hum Brain Mapp       Date:  2020-08-12       Impact factor: 5.038

9.  Anterolateral entorhinal cortex thickness as a new biomarker for early detection of Alzheimer's disease.

Authors:  Andrew J Holbrook; Nicholas J Tustison; Freddie Marquez; Jared Roberts; Michael A Yassa; Daniel L Gillen
Journal:  Alzheimers Dement (Amst)       Date:  2020-08-25

10.  Performance of three freely available methods for extracting white matter hyperintensities: FreeSurfer, UBO Detector, and BIANCA.

Authors:  Isabel Hotz; Pascal Frédéric Deschwanden; Franziskus Liem; Susan Mérillat; Brigitta Malagurski; Spyros Kollias; Lutz Jäncke
Journal:  Hum Brain Mapp       Date:  2021-12-07       Impact factor: 5.038

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