Literature DB >> 31353047

Nucleolar DNA Double-Strand Break Responses Underpinning rDNA Genomic Stability.

Marjolein van Sluis1, Brian McStay2.   

Abstract

Nucleoli, the sites of ribosome biogenesis, form around ribosomal gene (rDNA) arrays termed nucleolar organiser regions (NORs). These are the most transcriptionally active regions of the human genome and specialised responses have evolved to ensure their genomic stability. This review focuses on nucleolar responses to DNA double-strand breaks (DSBs) introduced into rDNA arrays using sequence-specific endonucleases, including CRISPR/Cas9. Repair of rDNA DSBs is predominantly carried out by the homology-directed repair (HDR) pathway that is facilitated by inhibition of transcription by RNA polymerase-I (Pol-I) and ensuing dramatic nucleolar reorganisation. Additionally, we review evidence that nucleoli can sense and respond to DSBs elsewhere in the genome.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA damage; double-strand breaks; homology-directed repair; nucleolus; rDNA; ribosomal genes

Mesh:

Substances:

Year:  2019        PMID: 31353047     DOI: 10.1016/j.tig.2019.07.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  10 in total

1.  Nucleolar localization of RAG1 modulates V(D)J recombination activity.

Authors:  Ryan M Brecht; Catherine C Liu; Helen A Beilinson; Alexandra Khitun; Sarah A Slavoff; David G Schatz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-11       Impact factor: 11.205

Review 2.  Regulatory roles of nucleolus organizer region-derived long non-coding RNAs.

Authors:  Qinyu Hao; Kannanganattu V Prasanth
Journal:  Mamm Genome       Date:  2021-08-26       Impact factor: 3.224

3.  APE1 assembles biomolecular condensates to promote the ATR-Chk1 DNA damage response in nucleolus.

Authors:  Jia Li; Haichao Zhao; Anne McMahon; Shan Yan
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

4.  Human nucleoli comprise multiple constrained territories, tethered to individual chromosomes.

Authors:  Hazel Mangan; Brian McStay
Journal:  Genes Dev       Date:  2021-03-04       Impact factor: 11.361

5.  Treacle and TOPBP1 control replication stress response in the nucleolus.

Authors:  Artem K Velichko; Natalia Ovsyannikova; Nadezhda V Petrova; Artem V Luzhin; Maria Vorobjeva; Alexey S Gavrikov; Alexander S Mishin; Igor I Kireev; Sergey V Razin; Omar L Kantidze
Journal:  J Cell Biol       Date:  2021-06-08       Impact factor: 10.539

6.  NORs on human acrocentric chromosome p-arms are active by default and can associate with nucleoli independently of rDNA.

Authors:  Marjolein van Sluis; Chelly van Vuuren; Hazel Mangan; Brian McStay
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-24       Impact factor: 11.205

7.  Dynamic PML protein nucleolar associations with persistent DNA damage lesions in response to nucleolar stress and senescence-inducing stimuli.

Authors:  Terezie Imrichova; Sona Hubackova; Alena Kucerova; Jan Kosla; Jiri Bartek; Zdenek Hodny; Pavla Vasicova
Journal:  Aging (Albany NY)       Date:  2019-09-07       Impact factor: 5.682

8.  The chemotherapeutic agent CX-5461 irreversibly blocks RNA polymerase I initiation and promoter release to cause nucleolar disruption, DNA damage and cell inviability.

Authors:  Jean-Clément Mars; Michel G Tremblay; Mélissa Valere; Dany S Sibai; Marianne Sabourin-Felix; Frédéric Lessard; Tom Moss
Journal:  NAR Cancer       Date:  2020-11-06

Review 9.  Antagonising Chromatin Remodelling Activities in the Regulation of Mammalian Ribosomal Transcription.

Authors:  Kanwal Tariq; Ann-Kristin Östlund Farrants
Journal:  Genes (Basel)       Date:  2021-06-24       Impact factor: 4.096

10.  DDX21 is a p38-MAPK-sensitive nucleolar protein necessary for mouse preimplantation embryo development and cell-fate specification.

Authors:  Pablo Bora; Lenka Gahurova; Andrea Hauserova; Martina Stiborova; Rebecca Collier; David Potěšil; Zbyněk Zdráhal; Alexander W Bruce
Journal:  Open Biol       Date:  2021-07-14       Impact factor: 6.411

  10 in total

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