Literature DB >> 31348879

Molecular Basis for Control of Diverse Genome Stability Factors by the Multi-BRCT Scaffold Rtt107.

Bingbing Wan1, Jian Wu2, Xiangzhou Meng1, Ming Lei3, Xiaolan Zhao4.   

Abstract

BRCT domains support myriad protein-protein interactions involved in genome maintenance. Although di-BRCT recognition of phospho-proteins is well known to support the genotoxic response, whether multi-BRCT domains can acquire distinct structures and functions is unclear. Here we present the tetra-BRCT structures from the conserved yeast protein Rtt107 in free and ligand-bound forms. The four BRCT repeats fold into a tetrahedral structure that recognizes unmodified ligands using a bi-partite mechanism, suggesting repeat origami enabling function acquisition. Functional studies show that Rtt107 binding of partner proteins of diverse activities promotes genome replication and stability in both distinct and concerted manners. A unified theme is that tetra- and di-BRCT domains of Rtt107 collaborate to recruit partner proteins to chromatin. Our work thus illustrates how a master regulator uses two types of BRCT domains to recognize distinct genome factors and direct them to chromatin for constitutive genome protection.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Mms22; Rtt107; Slx4; Smc5/6; di-BRCT domains; genome maintenance; protein interaction networks; rDNA stability; synthetic interactions; tetra-BRCT domains

Mesh:

Substances:

Year:  2019        PMID: 31348879      PMCID: PMC6745058          DOI: 10.1016/j.molcel.2019.05.035

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  54 in total

1.  Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA.

Authors:  C E Fritze; K Verschueren; R Strich; R Easton Esposito
Journal:  EMBO J       Date:  1997-11-03       Impact factor: 11.598

2.  Esc4/Rtt107 and the control of recombination during replication.

Authors:  Jodie K Chin; Vladimir I Bashkirov; Wolf-Dietrich Heyer; Floyd E Romesberg
Journal:  DNA Repair (Amst)       Date:  2006-03-29

3.  Brc1-mediated DNA repair and damage tolerance.

Authors:  Daniel M Sheedy; Dora Dimitrova; Jessica K Rankin; Kirstin L Bass; Karen M Lee; Claudia Tapia-Alveal; Susan H Harvey; Johanne M Murray; Matthew J O'Connell
Journal:  Genetics       Date:  2005-06-21       Impact factor: 4.562

4.  Structural basis of phosphopeptide recognition by the BRCT domain of BRCA1.

Authors:  R Scott Williams; Megan S Lee; D Duong Hau; J N Mark Glover
Journal:  Nat Struct Mol Biol       Date:  2004-05-09       Impact factor: 15.369

5.  A DNA integrity network in the yeast Saccharomyces cerevisiae.

Authors:  Xuewen Pan; Ping Ye; Daniel S Yuan; Xiaoling Wang; Joel S Bader; Jef D Boeke
Journal:  Cell       Date:  2006-02-16       Impact factor: 41.582

6.  A suppressor of two essential checkpoint genes identifies a novel protein that negatively affects dNTP pools.

Authors:  X Zhao; E G Muller; R Rothstein
Journal:  Mol Cell       Date:  1998-09       Impact factor: 17.970

7.  Esc4p, a new target of Mec1p (ATR), promotes resumption of DNA synthesis after DNA damage.

Authors:  John Rouse
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

8.  SMC5 and SMC6 genes are required for the segregation of repetitive chromosome regions.

Authors:  Jordi Torres-Rosell; Félix Machín; Sarah Farmer; Adam Jarmuz; Trevor Eydmann; Jacob Z Dalgaard; Luis Aragón
Journal:  Nat Cell Biol       Date:  2005-03-27       Impact factor: 28.824

9.  Rtt107/Esc4 binds silent chromatin and DNA repair proteins using different BRCT motifs.

Authors:  David C Zappulla; Arindel S R Maharaj; Jessica J Connelly; Rebecca A Jockusch; Rolf Sternglanz
Journal:  BMC Mol Biol       Date:  2006-11-09       Impact factor: 2.946

10.  Essential Roles of the Smc5/6 Complex in Replication through Natural Pausing Sites and Endogenous DNA Damage Tolerance.

Authors:  Demis Menolfi; Axel Delamarre; Armelle Lengronne; Philippe Pasero; Dana Branzei
Journal:  Mol Cell       Date:  2015-11-19       Impact factor: 17.970

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  7 in total

1.  Integrative analysis reveals unique structural and functional features of the Smc5/6 complex.

Authors:  You Yu; Shibai Li; Zheng Ser; Tanmoy Sanyal; Koyi Choi; Bingbing Wan; Huihui Kuang; Andrej Sali; Alex Kentsis; Dinshaw J Patel; Xiaolan Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-11       Impact factor: 11.205

2.  Structure Basis for Shaping the Nse4 Protein by the Nse1 and Nse3 Dimer within the Smc5/6 Complex.

Authors:  Aera Jo; Shibai Li; Jin Woo Shin; Xiaolan Zhao; Yunje Cho
Journal:  J Mol Biol       Date:  2021-03-04       Impact factor: 5.469

3.  Sumoylation of the DNA polymerase ε by the Smc5/6 complex contributes to DNA replication.

Authors:  Xiangzhou Meng; Lei Wei; Xiao P Peng; Xiaolan Zhao
Journal:  PLoS Genet       Date:  2019-11-25       Impact factor: 5.917

4.  Nse5/6 is a negative regulator of the ATPase activity of the Smc5/6 complex.

Authors:  Stephen T Hallett; Pascale Schellenberger; Lihong Zhou; Fabienne Beuron; Ed Morris; Johanne M Murray; Antony W Oliver
Journal:  Nucleic Acids Res       Date:  2021-05-07       Impact factor: 16.971

5.  Live-cell single-molecule tracking highlights requirements for stable Smc5/6 chromatin association in vivo.

Authors:  Thomas J Etheridge; Desiree Villahermosa; Eduard Campillo-Funollet; Alex David Herbert; Anja Irmisch; Adam T Watson; Hung Q Dang; Mark A Osborne; Antony W Oliver; Antony M Carr; Johanne M Murray
Journal:  Elife       Date:  2021-04-16       Impact factor: 8.713

Review 6.  Phosphorylation-dependent assembly of DNA damage response systems and the central roles of TOPBP1.

Authors:  Matthew Day; Antony W Oliver; Laurence H Pearl
Journal:  DNA Repair (Amst)       Date:  2021-09-29

7.  DNA polymerase ε relies on a unique domain for efficient replisome assembly and strand synthesis.

Authors:  Xiangzhou Meng; Lei Wei; Sujan Devbhandari; Tuo Zhang; Jenny Xiang; Dirk Remus; Xiaolan Zhao
Journal:  Nat Commun       Date:  2020-05-15       Impact factor: 14.919

  7 in total

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