Literature DB >> 31345771

Structure determination using solution NMR: Is it worth the effort?

Koh Takeuchi1, Kumaran Baskaran2, Haribabu Arthanari3.   

Abstract

It has been almost 40 years since solution NMR joined X-ray crystallography as a technique for determining high-resolution structures of proteins. Since then NMR derived structure has contributed in fundamental ways to our understanding of the function of biomolecules. With the already existing mature field of X-ray crystallography and the emergence of cryo-EM as techniques to tackle high-resolution structures of large protein complexes, the role of NMR in structure determination has been questioned. However, NMR has the unique ability to recapitulate the dynamic motion of proteins in their structures, while size limitations of the biomolecular systems that can be routinely studied still present challenges. The field has continually developed methodology and instrumentation since its introduction, pushing its frontiers and redefining its limits. Here we present a brief overview of NMR-based structure determination over the past 40 years. We outline the current state of the field and look ahead to the challenges that still need to be addressed to realize the future potential of NMR as a structural technique.
Copyright © 2019 Elsevier Inc. All rights reserved.

Keywords:  NOE; PRE/PCS; Solution NMR; Structure determination

Year:  2019        PMID: 31345771     DOI: 10.1016/j.jmr.2019.07.045

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  6 in total

1.  Protein-Protein Interaction Prediction for Targeted Protein Degradation.

Authors:  Oliver Orasch; Noah Weber; Michael Müller; Amir Amanzadi; Chiara Gasbarri; Christopher Trummer
Journal:  Int J Mol Sci       Date:  2022-06-24       Impact factor: 6.208

2.  Reconstruction of Coupled Intra- and Interdomain Protein Motion from Nuclear and Electron Magnetic Resonance.

Authors:  Alexandra Born; Janne Soetbeer; Frauke Breitgoff; Morkos A Henen; Nikolaos Sgourakis; Yevhen Polyhach; Parker J Nichols; Dean Strotz; Gunnar Jeschke; Beat Vögeli
Journal:  J Am Chem Soc       Date:  2021-09-27       Impact factor: 16.383

Review 3.  A Practical Perspective on the Roles of Solution NMR Spectroscopy in Drug Discovery.

Authors:  Qingxin Li; CongBao Kang
Journal:  Molecules       Date:  2020-06-28       Impact factor: 4.411

4.  Signal Deconvolution and Noise Factor Analysis Based on a Combination of Time-Frequency Analysis and Probabilistic Sparse Matrix Factorization.

Authors:  Shunji Yamada; Atsushi Kurotani; Eisuke Chikayama; Jun Kikuchi
Journal:  Int J Mol Sci       Date:  2020-04-23       Impact factor: 5.923

Review 5.  Insights into Structures and Dynamics of Flavivirus Proteases from NMR Studies.

Authors:  Qingxin Li; CongBao Kang
Journal:  Int J Mol Sci       Date:  2020-04-05       Impact factor: 5.923

Review 6.  Merging NMR Data and Computation Facilitates Data-Centered Research.

Authors:  Kumaran Baskaran; D Levi Craft; Hamid R Eghbalnia; Michael R Gryk; Jeffrey C Hoch; Mark W Maciejewski; Adam D Schuyler; Jonathan R Wedell; Colin W Wilburn
Journal:  Front Mol Biosci       Date:  2022-01-17
  6 in total

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