Literature DB >> 31342918

A possible role for epigenetic feedback regulation in the dynamics of the epithelial-mesenchymal transition (EMT).

Wen Jia1, Abhijeet Deshmukh, Sendurai A Mani, Mohit Kumar Jolly, Herbert Levine.   

Abstract

The epithelial-mesenchymal transition (EMT) often plays a critical role in cancer metastasis and chemoresistance, and decoding its dynamics is crucial to design effective therapeutics. EMT is regulated at multiple levels-transcriptional, translational, protein stability and epigenetics; the mechanisms by which epigenetic regulation can alter the dynamics of EMT remain elusive. Here, to identify the possible effects of epigenetic regulation in EMT, we incorporate a feedback term in our previously proposed model of EMT regulation of the miR-200/ZEB/miR-34/SNAIL circuit. This epigenetic feedback that stabilizes long-term transcriptional activity can alter the relative stability and distribution of states in a given cell population, particularly when incorporated in the inhibitory effect on miR-200 from ZEB. This feedback can stabilize the mesenchymal state, thus making transitions out of that state difficult. Conversely, epigenetic regulation of the self-activation of ZEB has only minor effects. Our model predicts that this effect could be seen in experiments, when epithelial cells are treated with an external EMT-inducing signal for a sufficiently long period of time and then allowed to recover. Our preliminary experimental data indicates that a chronic TGF-β exposure gives rise to irreveversible EMT state; i.e. unable to reverse back to the epithelial state. Thus, this integrated theoretical-experimental approach yields insights into how an epigenetic feedback may alter the dynamics of EMT.

Entities:  

Year:  2019        PMID: 31342918      PMCID: PMC7085921          DOI: 10.1088/1478-3975/ab34df

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  28 in total

1.  Systems biology approach suggests new miRNAs as phenotypic stability factors in the epithelial-mesenchymal transition.

Authors:  Daner A Silveira; Shantanu Gupta; José Carlos M Mombach
Journal:  J R Soc Interface       Date:  2020-10-14       Impact factor: 4.118

2.  Anticipating critical transitions in epithelial-hybrid-mesenchymal cell-fate determination.

Authors:  Sukanta Sarkar; Sudipta Kumar Sinha; Herbert Levine; Mohit Kumar Jolly; Partha Sharathi Dutta
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-16       Impact factor: 11.205

Review 3.  Interconnected high-dimensional landscapes of epithelial-mesenchymal plasticity and stemness in cancer.

Authors:  Sarthak Sahoo; Bazella Ashraf; Atchuta Srinivas Duddu; Adrian Biddle; Mohit Kumar Jolly
Journal:  Clin Exp Metastasis       Date:  2022-01-07       Impact factor: 5.150

4.  Epigenetic factor competition reshapes the EMT landscape.

Authors:  M Ali Al-Radhawi; Shubham Tripathi; Yun Zhang; Eduardo D Sontag; Herbert Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-10       Impact factor: 12.779

5.  A mathematical model exhibiting the effect of DNA methylation on the stability boundary in cell-fate networks.

Authors:  Tianchi Chen; M Ali Al-Radhawi; Eduardo D Sontag
Journal:  Epigenetics       Date:  2020-09-22       Impact factor: 4.528

6.  A Wnt-mediated phenotype switch along the epithelial-mesenchymal axis defines resistance and invasion downstream of ionising radiation in oral squamous cell carcinoma.

Authors:  Fatemeh Zolghadr; Nigel Tse; Dikasya Loka; George Joun; Sreelakshmi Meppat; Victor Wan; Hans Zoellner; Munira Xaymardan; Camile S Farah; J Guy Lyons; Eric Hau; Ellis Patrick; Naisana Seyedasli
Journal:  Br J Cancer       Date:  2021-03-30       Impact factor: 9.075

Review 7.  Epigenetic reprogramming during prostate cancer progression: A perspective from development.

Authors:  Sakshi Goel; Vipul Bhatia; Tanay Biswas; Bushra Ateeq
Journal:  Semin Cancer Biol       Date:  2021-02-02       Impact factor: 17.012

Review 8.  Roadmap on plasticity and epigenetics in cancer.

Authors:  Jasmine Foo; David Basanta; Russell C Rockne; Carly Strelez; Curran Shah; Kimya Ghaffarian; Shannon M Mumenthaler; Kelly Mitchell; Justin D Lathia; David Frankhouser; Sergio Branciamore; Ya-Huei Kuo; Guido Marcucci; Robert Vander Velde; Andriy Marusyk; Sui Huang; Kishore Hari; Mohit Kumar Jolly; Haralampos Hatzikirou; Kamrine E Poels; Mary E Spilker; Blerta Shtylla; Mark Robertson-Tessi; Alexander R A Anderson
Journal:  Phys Biol       Date:  2022-04-18       Impact factor: 2.959

9.  Emergent dynamics of a three-node regulatory network explain phenotypic switching and heterogeneity: a case study of Th1/Th2/Th17 cell differentiation.

Authors:  Atchuta Srinivas Duddu; Sauma Suvra Majumdar; Sarthak Sahoo; Siddharth Jhunjhunwala; Mohit Kumar Jolly
Journal:  Mol Biol Cell       Date:  2022-03-30       Impact factor: 3.612

Review 10.  Phenotypic Heterogeneity of Triple-Negative Breast Cancer Mediated by Epithelial-Mesenchymal Plasticity.

Authors:  Barbora Kvokačková; Ján Remšík; Mohit Kumar Jolly; Karel Souček
Journal:  Cancers (Basel)       Date:  2021-05-02       Impact factor: 6.639

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