| Literature DB >> 31341408 |
Xiucai Ye1,2, Hongmin Li1, Tetsuya Sakurai1,2, Pei-Wei Shueng3,4.
Abstract
Background: In recent years, the development and diagnosis of secondary cancer have become the primary concern of cancer survivors. A number of studies have been developing strategies to extract knowledge from the clinical data, aiming to identify important risk factors that can be used to prevent the recurrence of diseases. However, these studies do not focus on secondary cancer. Secondary cancer is lack of the strategies for clinical treatment as well as risk factor identification to prevent the occurrence.Entities:
Keywords: class imbalance; ensemble learning; patient heterogeneity; risk factors; secondary cancer; spectral clustering
Mesh:
Year: 2019 PMID: 31341408 PMCID: PMC6643128 DOI: 10.7150/ijms.33820
Source DB: PubMed Journal: Int J Med Sci ISSN: 1449-1907 Impact factor: 3.738
Figure 1Procedure of ensemble feature learning
Figure 2Results of the prediction accuracies using three classifiers
Ranking results of the importance in the 20 predictor variables for 4 types of cancers
| Rank | No division | 5 Groups | ||||
|---|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group5 | ||
| 1 | Primary Site | Pathologic Stage | Surgical Margin | Primary Site | Primary Site | Primary Site |
| 2 | Pathologic Stage | Primary Site | Pathologic Stage' | Pathologic Stage | Pathologic Stage | Pathologic Stage |
| 3 | Age | Surgical Margin | Age | Age | Age | Age |
| 4 | Surgical Margin | Surgical | Primary Site | Surgical Margin | Smoking | Surgical Margin |
| 5 | Histology | Histology | Histology | Smoking | Surgical Margin | Smoking |
| 6 | Drinking | Dose to clinical target volumes (CTV)_Low | Surgical | Number to clinical target volumes (CTV) _Low | Drinking | Drinking |
| 7 | Betel Nut | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low | Histology | Betel Nut | Betel Nut |
| 8 | Radiotherapy (RT) | Age | Betel Nut | Drinking | Number to clinical target volumes (CTV) _Low | Histology |
| 9 | Smoking | Tumor Size | Tumor Size | Betel Nut | Dose to clinical target volumes (CTV)_High | Number to clinical target volumes (CTV) _Low |
| 10 | Behavior Code | Dose to clinical target volumes (CTV)_High | Drinking | Dose to clinical target volumes (CTV)_Low | Histology | Dose to clinical target volumes (CTV)_High |
| 11 | Sequence of Local regional Therapy and Systemic Therapy | Betel Nut | Smoking | Dose to clinical target volumes (CTV)_High | Differentiation | Differentiation |
| 12 | Body Mass Index (BMI) | Drinking | Dose to clinical target volumes (CTV)_Low | Surgical | Number to clinical target volumes (CTV) _High | Number to clinical target volumes (CTV) _High |
| 13 | Number to clinical target volumes (CTV) _High | Differentiation | Dose to clinical target volumes (CTV)_High | Tumor Size | Surgical | Surgical |
| 14 | Differentiation | Radiotherapy (RT) surgery | Body Mass Index (BMI) | Body Mass Index (BMI) | Tumor Size | Tumor Size |
| 15 | Dose to clinical target volumes (CTV)_High | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Number to clinical target volumes (CTV) _High | Body Mass Index (BMI) | Body Mass Index (BMI) |
| 16 | Dose to clinical target volumes (CTV)_Low | Body Mass Index (BMI) | Differentiation | Differentiation | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy |
| 17 | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _High | Radiotherapy (RT) surgery | Sequence of Local regional Therapy and Systemic Therapy | Dose to clinical target volumes (CTV)_Low | Dose to clinical target volumes (CTV)_Low |
| 18 | Radiotherapy (RT) surgery | Smoking | Radiotherapy (RT) | Behavior Code | Radiotherapy (RT) | Radiotherapy (RT) |
| 19 | Tumor Size | Behavior Code | Number to clinical target volumes (CTV) _High | Radiotherapy (RT) surgery | Behavior Code | Behavior Code |
| 20 | Surgical | Radiotherapy (RT) | Behavior Code | Radiotherapy (RT) | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery |
Figure 3Results of the prediction accuracies by varying the number of predictor variables
Figure 4Comparison of the prediction accuracies
Ranking results of the importance in the 19 predictor variables for breast cancer
| Rank | No division | 5 Groups | ||||
|---|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group5 | ||
| 1 | Pathologic Stage | Number to clinical target volumes (CTV) _High | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin |
| 2 | Histology | Dose to clinical target volumes (CTV)_Low | Pathologic Stage | Histology | Smoking | Smoking |
| 3 | Surgical Margin | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _High | Pathologic Stage | Histology | Pathologic Stage |
| 4 | Body Mass Index (BMI) | Pathologic Stage | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High | Number to clinical target volumes (CTV) _High | Histology |
| 5 | Age | Dose to clinical target volumes (CTV)_High | Body Mass Index (BMI) | Dose to clinical target volumes (CTV)_Low | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High |
| 6 | Number to clinical target volumes (CTV) _High | Age | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low | Pathologic Stage | Body Mass Index (BMI) |
| 7 | Betel Nut | Body Mass Index (BMI) | Age | Smoking | Number to clinical target volumes (CTV) _Low | Betel Nut |
| 8 | Dose to clinical target volumes (CTV)_Low | Surgical Margin | Dose to clinical target volumes (CTV)_High | Body Mass Index (BMI) | Body Mass Index (BMI) | Drinking |
| 9 | Behavior Code | Surgical | Tumor Size | Age | Betel Nut | Dose to clinical target volumes (CTV)_Low |
| 10 | Number to clinical target volumes (CTV) _Low | Tumor Size | Betel Nut | Betel Nut | Surgical | Number to clinical target volumes (CTV) _Low |
| 11 | Dose to clinical target volumes (CTV)_High | Histology | Differentiation | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High | Surgical |
| 12 | Tumor Size | Betel Nut | Surgical | Surgical | Drinking | Dose to clinical target volumes (CTV)_High |
| 13 | Differentiation | Differentiation | Histology | Drinking | Age | Age |
| 14 | Drinking | Radiotherapy (RT) | Radiotherapy (RT) | Differentiation | Radiotherapy (RT) | Differentiation |
| 15 | Smoking | Smoking | Drinking | Tumor Size | Tumor Size | Tumor Size |
| 16 | Radiotherapy (RT) | Drinking | Smoking | Radiotherapy (RT) | Differentiation | Radiotherapy (RT) |
| 17 | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Sequence of Local regional Therapy and Systemic Therapy |
| 18 | Radiotherapy (RT) surgery | Behavior Code | Behavior Code | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Behavior Code |
| 19 | Surgical | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Behavior Code | Behavior Code | Radiotherapy (RT) surgery |
Ranking results of the importance in the 19 predictor variables for maternal cancer
| Rank | No division | 5 Groups | ||||
|---|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group5 | ||
| 1 | Age | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin | Pathologic Stage |
| 2 | Pathologic Stage | Smoking | Smoking | Smoking | Pathologic Stage | Surgical Margin |
| 3 | Surgical Margin | Pathologic Stage | Pathologic Stage | Pathologic Stage | Drinking | Drinking |
| 4 | Body Mass Index (BMI) | Histology | Age | Drinking | Sequence of Local regional Therapy and Systemic Therapy | Age |
| 5 | Histology | Body Mass Index (BMI) | Histology | Age | Age | Sequence of Local regional Therapy and Systemic Therapy |
| 6 | Betel Nut | Drinking | Body Mass Index (BMI) | Histology | Smoking | Smoking |
| 7 | Number to clinical target volumes (CTV) _High | Betel Nut | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Histology | Histology |
| 8 | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High | Betel Nut | Body Mass Index (BMI) | Number to clinical target volumes (CTV) _High | Body Mass Index (BMI) |
| 9 | Number to clinical target volumes (CTV) _Low | Sequence of Local regional Therapy and Systemic Therapy | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV)_Low | Betel Nut |
| 10 | Smoking | Differentiation | Drinking | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _High |
| 11 | Differentiation | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High | Betel Nut | Body Mass Index (BMI) | Dose to clinical target volumes (CTV)_Low |
| 12 | Radiotherapy (RT) surgery | Age | Differentiation | Surgical | Differentiation | Differentiation |
| 13 | Behavior Code | Surgical | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low | Surgical | Number to clinical target volumes (CTV) _Low |
| 14 | Radiotherapy (RT) | Number to clinical target volumes (CTV) _Low | Surgical | Radiotherapy (RT) | Betel Nut | Surgical |
| 15 | Drinking | Dose to clinical target volumes (CTV)_High | Radiotherapy (RT) | Differentiation | Radiotherapy (RT) | Radiotherapy (RT) |
| 16 | Tumor Size | Tumor Size | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High |
| 17 | Dose to clinical target volumes (CTV)_High | Radiotherapy (RT) | Tumor Size | Tumor Size | Tumor Size | Tumor Size |
| 18 | Sequence of Local regional Therapy and Systemic Therapy | Behavior Code | Behavior Code | Behavior Code | Behavior Code | Behavior Code |
| 19 | Surgical | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery |
Ranking results of the importance in the 19 predictor variables for colorectal cancer
| Rank | No division | 5 Groups | ||||
|---|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group5 | ||
| 1 | Age | Pathologic Stage | Pathologic Stage | Pathologic Stage | Pathologic Stage | Pathologic Stage |
| 2 | Pathologic Stage | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin | Age |
| 3 | Surgical Margin | Smoking | Smoking | Age | Age | Surgical Margin |
| 4 | Betel Nut | Drinking | Drinking | Smoking | Smoking | Smoking |
| 5 | Histology | Age | Age | Drinking | Drinking | Drinking |
| 6 | Dose to clinical target volumes (CTV)_Low | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy |
| 7 | Number to clinical target volumes (CTV) _High | Body Mass Index (BMI) | Body Mass Index (BMI) | Betel Nut | Betel Nut | Body Mass Index (BMI) |
| 8 | Body Mass Index (BMI) | Betel Nut | Betel Nut | Number to clinical target volumes (CTV) _Low | Body Mass Index (BMI) | Betel Nut |
| 9 | Radiotherapy (RT) | Histology | Histology | Body Mass Index (BMI) | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low |
| 10 | Smoking | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low | Histology | Histology | Dose to clinical target volumes (CTV)_Low |
| 11 | Drinking | Dose to clinical target volumes (CTV)_Low | Differentiation | Dose to clinical target volumes (CTV)_Low | Differentiation | Histology |
| 12 | Number to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _High | Number to clinical target volumes (CTV) _High | Differentiation | Tumor Size | Number to clinical target volumes (CTV) _High |
| 13 | Dose to clinical target volumes (CTV)_High | Surgical | Dose to clinical target volumes (CTV)_Low | Number to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV)_Low | Differentiation |
| 14 | Radiotherapy (RT) surgery | Differentiation | Surgical | Radiotherapy (RT) | Radiotherapy (RT) | Tumor Size |
| 15 | Differentiation | Radiotherapy (RT) | Radiotherapy (RT) | Tumor Size | Number to clinical target volumes (CTV) _High | Surgical |
| 16 | Behavior Code | Dose to clinical target volumes (CTV)_High | Tumor Size | Surgical | Surgical | Radiotherapy (RT) |
| 17 | Tumor Size | Tumor Size | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High | Dose to clinical target volumes (CTV)_High |
| 18 | Sequence of Local regional Therapy and Systemic Therapy | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Behavior Code | Behavior Code | Behavior Code |
| 19 | Surgical | Behavior Code | Behavior Code | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery |
Ranking results of the importance in the 19 predictor variables for head and neck cancer
| Rank | No division | 5 Groups | ||||
|---|---|---|---|---|---|---|
| Group 1 | Group 2 | Group 3 | Group 4 | Group5 | ||
| 1 | Age | Pathologic Stage | Age | Pathologic Stage | Age | Pathologic Stage |
| 2 | Pathologic Stage | Age | Pathologic Stage | Age | Pathologic Stage | Age |
| 3 | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin | Surgical Margin |
| 4 | Dose to clinical target volumes (CTV)_Low | Smoking | Smoking | Smoking | Smoking | Drinking |
| 5 | Histology | Drinking | Drinking | Drinking | Body Mass Index (BMI) | Smoking |
| 6 | Betel Nut | Body Mass Index (BMI) | Body Mass Index (BMI) | Body Mass Index (BMI) | Drinking | Body Mass Index (BMI) |
| 7 | Body Mass Index (BMI) | Betel Nut | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy | Sequence of Local regional Therapy and Systemic Therapy |
| 8 | Number to clinical target volumes (CTV) _Low | Sequence of Local regional Therapy and Systemic Therapy | Betel Nut | Betel Nut | Number to clinical target volumes (CTV) _Low | Betel Nut |
| 9 | Number to clinical target volumes (CTV) _High | Number to clinical target volumes (CTV) _Low | Histology | Number to clinical target volumes (CTV) _Low | Dose to clinical target volumes (CTV) _Low | Number to clinical target volumes (CTV) _Low |
| 10 | Drinking | Histology | Number to clinical target volumes (CTV) _Low | Tumor Size | Betel Nut | Dose to clinical target volumes (CTV) _Low |
| 11 | Differentiation | Dose to clinical target volumes (CTV) _Low | Dose to clinical target volumes (CTV) _Low | Histology | Histology | Histology |
| 12 | Dose to clinical target volumes (CTV)_High | Number to clinical target volumes (CTV) _High | Radiotherapy (RT) | Dose to clinical target volumes (CTV) _Low | Tumor Size | Tumor Size |
| 13 | Smoking | Radiotherapy (RT) | Differentiation | Radiotherapy (RT) | Differentiation | Differentiation |
| 14 | Radiotherapy (RT) | Surgical | Number to clinical target volumes (CTV) _High | Differentiation | Number to clinical target volumes (CTV) _High | Number to clinical target volumes (CTV) _High |
| 15 | Radiotherapy (RT) surgery | Differentiation | Surgical | Number to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV) _High |
| 16 | Behavior Code | Tumor Size | Tumor Size | Surgical | Radiotherapy (RT) | Radiotherapy (RT) |
| 17 | Sequence of Local regional Therapy and Systemic Therapy | Dose to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV) _High | Dose to clinical target volumes (CTV) _High | Surgical | Surgical |
| 18 | Tumor Size | Behavior Code | Behavior Code | Behavior Code | Behavior Code | Behavior Code |
| 19 | Surgical | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery | Radiotherapy (RT) surgery |