| Literature DB >> 31339102 |
Aye Moa1, David Muscatello2, Abrar Chughtai2, Xin Chen1, C Raina MacIntyre1,3.
Abstract
BACKGROUND: Influenza causes serious illness requiring annual health system surge capacity, yet annual seasonal variation makes it difficult to forecast and plan for the severity of an upcoming season. Research shows that hospital and health system stakeholders indicate a preference for forecasting tools that are easy to use and understand to assist with surge capacity planning for influenza.Entities:
Keywords: influenza; prediction tool; risk assessment
Year: 2019 PMID: 31339102 PMCID: PMC6683655 DOI: 10.2196/11780
Source DB: PubMed Journal: JMIR Public Health Surveill ISSN: 2369-2960
Parameters and scoring criteria of the influenza prediction models (Australian Influenza Surveillance Reports [7] and NNDSS [5]).
| Parameter and criteria | Scores | ||
| ≤1 | 0 | ||
| >1 to 1.5 | 1 | ||
| >1.5 to 2 | 2 | ||
| >2 to 2.5 | 3 | ||
| >2.5 | 4 | ||
| ≤1 | 0 | ||
| >1 to 1.5 | 1 | ||
| >1.5 to 2 | 2 | ||
| >2 to 2.5 | 3 | ||
| >2.5 | 4 | ||
| B or A(H1N1) | 1 | ||
| A(H1N1)pdm09 | 2 | ||
| A(H3N2) | 3 | ||
| Novel strain | 4 | ||
| A(H1N1) | 1 | ||
| B | 2 | ||
| A(H3N2) or A(H1N1)pdm09 | 3 | ||
| Novel strain | 4 | ||
| No mismatch | 1 | ||
| Mismatch in 1 strain only | 2 | ||
| Mismatch in >1 but not all strains | 3 | ||
| Mismatch in all strains | 4 | ||
| ≤0.01 | 1 | ||
| >0.01 to 0.05 | 2 | ||
| >0.05 to 0.1 | 3 | ||
| >0.1 | 4 | ||
Scoring method for model 1 (from Australian Influenza Surveillance Reports [7] and NNDSS [5]).
| Year | Actual impact of season | Parametersa | Total score (max=20) | Severity indexb, % | ||||
| Timing of seasonal onset (score) | Relative magnitude of influenza activity (score) | Dominant strain (score) | Vaccine mismatch in the season (score) | Early season deaths (score) | ||||
| 2007 | Severe | 1.1 (1) | 1.3 (1) | A/H3N2 (3) | All strains (4) | 18c (3) | 12 | 60 |
| 2008 | Moderate | 1.7 (2) | 2.8 (4) | B (1) | 1 strain (2) | 3c (1) | 10 | 50 |
| 2009 | Very severe (pandemic) | 13.7 (4) | 19.3 (4) | Novel/pandemic strain or A/H1N1pdm09 (4) | All strains (4) | 61 (4) | 20 | 100 |
| 2010 | Mild | 1.2 (1) | 0.3 (0) | A/H1N1pdm09 (2) | None (1) | 2 (1) | 5 | 25 |
| 2011 | Moderate | 1.1 (1) | 1.4 (1) | A/H1N1pdm09 (2) | None (1) | 10 (2) | 7 | 35 |
| 2012 | Severe | 2.5 (3) | 1.4 (1) | A/H3N2 (3) | >1 but not all strains (3) | 23 (3) | 13 | 65 |
| 2013 | Moderate | 1.1 (1) | 0.8 (0) | A/H1N1pdm09 (2) | 1 strain (2) | 11 (2) | 7 | 35 |
| 2014 | Moderate | 1.1 (1) | 1.2 (1) | A/H1N1pdm09 (2) | 1 strain (2) | 22 (3) | 9 | 45 |
| 2015 | Moderate | 1.5 (1) | 2.9 (4) | B (1) | None (1) | 46 (4) | 11 | 55 |
| 2016 | Moderate | 1.0 (0) | 1.5 (1) | A/H1N1pdm09 (2) | None (1) | 17 (3) | 7 | 35 |
| 2017 | Severe | 1.3 (1) | 2.1 (3) | A/H3N2 (3) | 1 strain (2) | 43 (4) | 13 | 65 |
| 2018d | Moderate | 0.6 (0) | 1.0 (0) | A/H1N1pdm09 (2) | None (1) | 35 (3) | 6 | 30 |
aTiming of seasonal onset: ratio of laboratory-confirmed influenza notifications in May/January to April average [5]; relative magnitude of influenza activity: ratio of laboratory-confirmed influenza notifications in May compared to last 5 years’ average [5]; dominant strain: dominant strain in circulation [7]; vaccine mismatch in season: vaccine mismatch with dominant strain(s) [7]; early season deaths: rate per 100,000 population of notified influenza-associated deaths at the end of July in the season [7].
cSeverity index=total score/maximum score.
dInfluenza-associated deaths in 2007 and 2008 were estimated by calculating the proportion (total number of notifications at the end of July/total notifications in the year) multiplied by total deaths reported by the Australian Bureau of Statistics for 2007 and 2008, accordingly.
eProspective year, real-time data.
Comparison of the five models and their corresponding seasonal influenza predictions.
| Year | Actual impact of season | Prediction of seasonal impact by scoring criteria | |||||
| Model 1 | Model 2 | Model 3 | Model 4 | Model 5 | |||
| Severe | |||||||
| Severity index | 60 | 69 | 56 | 60 | 75 | ||
| Season prediction | Severe | Severe | Moderate | Severe | Severe | ||
| Correct prediction | Yes | Yes | No | Yes | Yes | ||
| Moderate | |||||||
| Severity index | 50 | 50 | 56 | 55 | 35 | ||
| Season prediction | Moderate | Moderate | Moderate | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Very severe (pandemic) | |||||||
| Severity index | 100 | 100 | 100 | 100 | 100 | ||
| Season prediction | Pandemic | Pandemic | Pandemic | Pandemic | Pandemic | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Mild | |||||||
| Severity index | 25 | 25 | 25 | 30 | 30 | ||
| Season prediction | Mild | Mild | Mild | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | Yes | No | No | ||
| Moderate | |||||||
| Severity index | 35 | 38 | 31 | 40 | 45 | ||
| Season prediction | Moderate | Moderate | Moderate | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Severe | |||||||
| Severity index | 65 | 63 | 63 | 65 | 75 | ||
| Season prediction | Severe | Severe | Severe | Severe | Severe | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Moderate | |||||||
| Severity index | 35 | 38 | 31 | 40 | 35 | ||
| Season prediction | Moderate | Moderate | Moderate | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Moderate | |||||||
| Severity index | 45 | 50 | 38 | 50 | 45 | ||
| Season prediction | Moderate | Moderate | Moderate | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | Yes | Yes | Yes | ||
| Moderate | |||||||
| Severity index | 55 | 63 | 44 | 60 | 65 | ||
| Season prediction | Moderate | Severe | Moderate | Severe | Severe | ||
| Correct prediction | Yes | No | Yes | No | No | ||
| Moderate | |||||||
| Severity index | 35 | 44 | 25 | 40 | 35 | ||
| Season prediction | Moderate | Moderate | Mild | Moderate | Moderate | ||
| Correct prediction | Yes | Yes | No | Yes | Yes | ||
| Severe | |||||||
| Severity index | 65 | 75 | 56 | 65 | 80 | ||
| Season prediction | Severe | Severe | Moderate | Severe | Severe | ||
| Correct prediction | Yes | Yes | No | Yes | Yes | ||
| Predicted accuracy of past influenza seasons | 11/11 | 10/11 | 8/11 | 9/11 | 9/11 | ||
Figure 1The Flucast tool (online form).