Literature DB >> 31337910

The computational protein designers.

Jeffrey M Perkel.   

Abstract

Entities:  

Keywords:  Computational biology and bioinformatics; Structural biology; Synthetic biology

Mesh：

Substances：

Year:  2019        PMID： 31337910     DOI： 10.1038/d41586-019-02251-x

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


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  7 in total

1.  Design of a novel globular protein fold with atomic-level accuracy.

Authors:  Brian Kuhlman; Gautam Dantas; Gregory C Ireton; Gabriele Varani; Barry L Stoddard; David Baker
Journal:  Science       Date:  2003-11-21       Impact factor: 47.728

2.  Packing of apolar side chains enables accurate design of highly stable membrane proteins.

Authors:  Marco Mravic; Jessica L Thomaston; Maxwell Tucker; Paige E Solomon; Lijun Liu; William F DeGrado
Journal:  Science       Date:  2019-03-29       Impact factor: 47.728

3.  Self-Assembling 2D Arrays with de Novo Protein Building Blocks.

Authors:  Zibo Chen; Matthew C Johnson; Jiajun Chen; Matthew J Bick; Scott E Boyken; Baihan Lin; James J De Yoreo; Justin M Kollman; David Baker; Frank DiMaio
Journal:  J Am Chem Soc       Date:  2019-05-10       Impact factor: 15.419

4.  Comprehensive computational design of ordered peptide macrocycles.

Authors:  Parisa Hosseinzadeh; Gaurav Bhardwaj; Vikram Khipple Mulligan; Matthew D Shortridge; Timothy W Craven; Fátima Pardo-Avila; Stephen A Rettie; David E Kim; Daniel-Adriano Silva; Yehia M Ibrahim; Ian K Webb; John R Cort; Joshua N Adkins; Gabriele Varani; David Baker
Journal:  Science       Date:  2017-12-15       Impact factor: 47.728

5.  Induction of Potent Neutralizing Antibody Responses by a Designed Protein Nanoparticle Vaccine for Respiratory Syncytial Virus.

Authors:  Jessica Marcandalli; Brooke Fiala; Sebastian Ols; Michela Perotti; Willem de van der Schueren; Joost Snijder; Edgar Hodge; Mark Benhaim; Rashmi Ravichandran; Lauren Carter; Will Sheffler; Livia Brunner; Maria Lawrenz; Patrice Dubois; Antonio Lanzavecchia; Federica Sallusto; Kelly K Lee; David Veesler; Colin E Correnti; Lance J Stewart; David Baker; Karin Loré; Laurent Perez; Neil P King
Journal:  Cell       Date:  2019-03-07       Impact factor: 41.582

6.  De novo protein design by citizen scientists.

Authors:  Brian Koepnick; Jeff Flatten; Tamir Husain; Alex Ford; Daniel-Adriano Silva; Matthew J Bick; Aaron Bauer; Gaohua Liu; Yojiro Ishida; Alexander Boykov; Roger D Estep; Susan Kleinfelter; Toke Nørgård-Solano; Linda Wei; Foldit Players; Gaetano T Montelione; Frank DiMaio; Zoran Popović; Firas Khatib; Seth Cooper; David Baker
Journal:  Nature       Date:  2019-06-05       Impact factor: 49.962

7.  De novo design of a fluorescence-activating β-barrel.

Authors:  Jiayi Dou; Anastassia A Vorobieva; William Sheffler; Lindsey A Doyle; Hahnbeom Park; Matthew J Bick; Binchen Mao; Glenna W Foight; Min Yen Lee; Lauren A Gagnon; Lauren Carter; Banumathi Sankaran; Sergey Ovchinnikov; Enrique Marcos; Po-Ssu Huang; Joshua C Vaughan; Barry L Stoddard; David Baker
Journal:  Nature       Date:  2018-09-12       Impact factor: 49.962
  7 in total
  1 in total

1.  Perspectives on High-Throughput Ligand/Protein Docking With Martini MD Simulations.

Authors:  Paulo C T Souza; Vittorio Limongelli; Sangwook Wu; Siewert J Marrink; Luca Monticelli
Journal:  Front Mol Biosci       Date:  2021-03-29
  1 in total

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