Literature DB >> 31336052

The topological key lncRNA H2k2 from the ceRNA network promotes mesangial cell proliferation in diabetic nephropathy via the miR-449a/b/Trim11/Mek signaling pathway.

Wenyun Chen1, Rui Peng2, Yan Sun1, Handeng Liu1, Luyu Zhang1, Huimin Peng1, Zheng Zhang1.   

Abstract

Evidence has shown that long noncoding RNAs (lncRNAs) in the competing endogenous RNA (ceRNA) network are involved in various diseases. However, there is a lack of studies of the ceRNA network in diabetic nephropathy (DN). In this study, we investigated the effect of lncRNAs on mesangial cell (MC) proliferation in DN-related ceRNA networks. Differences in lncRNA and mRNA expression between DN and normal mouse kidney tissues were detected with RNA-seq, and DN-related lncRNA/mRNA/microRNA (miRNA) ceRNA networks were constructed by R3.4.3. Computational analysis was performed, and expression and interactions between the topological RNAs were detected by bioinformatics methods, real-time quantitative PCR (qPCR), and luciferase assay. Cell proliferation ability was measured by 5-ethynyl-2'-deoxyuridine (EdU) in MCs cultured under high- or low-glucose conditions. Moreover, the effect of the topological key lncRNA histocompatibility 2 K region locus 2 (H2k2) H2k2 on MC proliferation via the miRNA (miR)-449a/b/triplet motif 11 (Trim11)/Mek signaling pathway was examined by EdU, flow cytometry analysis, and Western blot. In total, 153 lncRNAs, 428 mRNAs, and 2242 interactions were included in the constructed DN-related ceRNA network. There were 15 RNAs in the top 5% of degree and betweenness. The expression of lncRNA H2k2 and mRNA Trim11 in MCs was increased in DN, which is consistent with the results of RNA-seq and real-time qPCR in vivo and in vitro. miR-449a and miR-449b, which were down-regulated in MCs cultured with high glucose, were selected for further analysis. The results of real-time qPCR and luciferase assay revealed the lncRNA H2k2-miR-449a/b-Trim11 interaction in MCs. In addition, the data showed that H2k2 regulates MC proliferation via the miR-449ab/Trim11/Mek signaling pathway. Taken together, these results provide new insight into the association between the topological key lncRNA H2k2 in the DN-related ceRNA network and the miR-449a/b/Trim11/Mek signaling pathway during MC proliferation in DN.-Chen, W., Peng, R., Sun, Y., Liu, H., Zhang, L., Peng, H., Zhang, Z. The topological key lncRNA H2k2 from the ceRNA network promotes mesangial cell proliferation in diabetic nephropathy via the miR-449a/b/Trim11/Mek signaling pathway.

Entities:  

Keywords:  DN; MCs; bioinformatics; miRNA

Mesh:

Substances:

Year:  2019        PMID: 31336052     DOI: 10.1096/fj.201900522R

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.191


  9 in total

1.  Expression of LncRNA KCNQ1Ot1 in diabetic nephropathy and its correlation with MEK/ERK signaling pathway.

Authors:  Xuangeng Huang; Junhua Tan; Yingrong Li; Hongye Su; Meiying Huang; Feifan Huang; Peng Huang
Journal:  Am J Transl Res       Date:  2022-03-15       Impact factor: 4.060

2.  Understanding Competitive Endogenous RNA Network Mechanism in Type 1 Diabetes Mellitus Using Computational and Bioinformatics Approaches.

Authors:  Xuanzi Yi; Xu Cheng
Journal:  Diabetes Metab Syndr Obes       Date:  2021-09-08       Impact factor: 3.168

3.  Long Noncoding RNA CDKN2B-AS1 Facilitates Lung Cancer Development Through Regulating miR-378b/NR2C2.

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Journal:  Onco Targets Ther       Date:  2020-10-20       Impact factor: 4.147

Review 4.  Long Noncoding RNAs and Their Therapeutic Promise in Diabetic Nephropathy.

Authors:  Juan D Coellar; Jianyin Long; Farhad R Danesh
Journal:  Nephron       Date:  2021-04-14       Impact factor: 2.847

5.  Sp1-Induced lncRNA Rmrp Promotes Mesangial Cell Proliferation and Fibrosis in Diabetic Nephropathy by Modulating the miR-1a-3p/JunD Pathway.

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Journal:  Front Endocrinol (Lausanne)       Date:  2021-08-27       Impact factor: 5.555

Review 6.  Long Non-Coding RNAs in the Pathogenesis of Diabetic Kidney Disease.

Authors:  Mengsi Hu; Qiqi Ma; Bing Liu; Qianhui Wang; Tingwei Zhang; Tongtong Huang; Zhimei Lv
Journal:  Front Cell Dev Biol       Date:  2022-04-20

Review 7.  Noncoding RNAs in Diabetic Nephropathy: Pathogenesis, Biomarkers, and Therapy.

Authors:  Jiarong Lv; Yu Wu; Yifeng Mai; Shizhong Bu
Journal:  J Diabetes Res       Date:  2020-06-19       Impact factor: 4.011

8.  LncRNA HOTAIR enhances breast cancer radioresistance through facilitating HSPA1A expression via sequestering miR-449b-5p.

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Journal:  Thorac Cancer       Date:  2020-05-06       Impact factor: 3.500

9.  LncRNA ARAP1-AS2 promotes high glucose-induced human proximal tubular cell injury via persistent transactivation of the EGFR by interacting with ARAP1.

Authors:  Xin Li; Tian-Kui Ma; Si Wen; Lu-Lu Li; Li Xu; Xin-Wang Zhu; Cong-Xiao Zhang; Nan Liu; Xu Wang; Qiu-Ling Fan
Journal:  J Cell Mol Med       Date:  2020-09-23       Impact factor: 5.295

  9 in total

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