| Literature DB >> 31332186 |
Brent Nowinski1, Christa B Smith1, Courtney M Thomas1, Kaitlin Esson2,3, Roman Marin4, Christina M Preston4, James M Birch4, Christopher A Scholin4, Marcel Huntemann5, Alicia Clum5, Brian Foster5, Bryce Foster5, Simon Roux5, Krishnaveni Palaniappan5, Neha Varghese5, Supratim Mukherjee5, T B K Reddy5, Chris Daum5, Alex Copeland5, I-Min A Chen5, Natalia N Ivanova5, Nikos C Kyrpides5, Tijana Glavina Del Rio5, William B Whitman6, Ronald P Kiene2,3, Emiley A Eloe-Fadrosh5, Mary Ann Moran7.
Abstract
Metagenomic and metatranscriptomic time-series data covering a 52-day period in the fall of 2016 provide an inventory of bacterial and archaeal community genes, transcripts, and taxonomy during an intense dinoflagellate bloom in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes (0.8 terabases), 82 metatranscriptomes (1.1 terabases), and 88 16S rRNA amplicon libraries from samples collected on 41 dates. The dataset also includes 88 18S rRNA amplicon libraries, characterizing the taxonomy of the eukaryotic community during the bloom. Accompanying the sequence data are chemical and biological measurements associated with each sample. These datasets will facilitate studies of the structure and function of marine bacterial communities during episodic phytoplankton blooms.Entities:
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Year: 2019 PMID： 31332186 PMCID： PMC6646334 DOI： 10.1038/s41597-019-0132-4
Source DB: PubMed Journal: Sci Data ISSN： 2052-4463 Impact factor: 6.444