Literature DB >> 31327793

Novel "Predictor Patch" Method for Adding Predictors Using Estimates From Outside Datasets - A Proof-of-Concept Study Adding Kidney Measures to Cardiovascular Mortality Prediction.

Kunihiro Matsushita1, Yingying Sang1, Jingsha Chen1, Shoshana H Ballew1, Michael Shlipak2, Josef Coresh1, Carmen A Peralta2, Mark Woodward1,3,4.   

Abstract

BACKGROUND: Cardiovascular guidelines include risk prediction models for decision making that lack the capacity to include novel predictors.Methods and 
Results: We explored a new "predictor patch" approach to calibrating the predicted risk from a base model according to 2 components from outside datasets: (1) the difference in observed vs. expected values of novel predictors and (2) the hazard ratios (HRs) for novel predictors, in a scenario of adding kidney measures for cardiovascular mortality. Using 4 US cohorts (n=54,425) we alternately chose 1 as the base dataset and constructed a base prediction model with traditional predictors for cross-validation. In the 3 other "outside" datasets, we developed a linear regression model with traditional predictors for estimating expected values of glomerular filtration rate and albuminuria and obtained their adjusted HRs of cardiovascular mortality, together constituting a "patch" for adding kidney measures to the base model. The base model predicted cardiovascular mortality well in each cohort (c-statistic 0.78-0.91). The addition of kidney measures using a patch significantly improved discrimination (cross-validated ∆c-statistic 0.006 [0.004-0.008]) to a similar degree as refitting these kidney measures in each base dataset.
CONCLUSIONS: The addition of kidney measures using our new "predictor patch" approach based on estimates from outside datasets improved cardiovascular mortality prediction based on traditional predictors, providing an option to incorporate novel predictors to an existing prediction model.

Entities:  

Keywords:  Cardiovascular disease; Chronic kidney disease; Novel biomarkers; Risk prediction

Year:  2019        PMID: 31327793     DOI: 10.1253/circj.CJ-19-0320

Source DB:  PubMed          Journal:  Circ J        ISSN: 1346-9843            Impact factor:   2.993


  2 in total

1.  Risk Prediction Models for Atherosclerotic Cardiovascular Disease in Patients with Chronic Kidney Disease: The CRIC Study.

Authors:  Joshua D Bundy; Mahboob Rahman; Kunihiro Matsushita; Byron C Jaeger; Jordana B Cohen; Jing Chen; Rajat Deo; Mirela A Dobre; Harold I Feldman; John Flack; Radhakrishna R Kallem; James P Lash; Stephen Seliger; Tariq Shafi; Shoshana J Weiner; Myles Wolf; Wei Yang; Norrina B Allen; Nisha Bansal; Jiang He
Journal:  J Am Soc Nephrol       Date:  2022-02-10       Impact factor: 10.121

2.  Incorporating kidney disease measures into cardiovascular risk prediction: Development and validation in 9 million adults from 72 datasets.

Authors:  Kunihiro Matsushita; Simerjot K Jassal; Yingying Sang; Shoshana H Ballew; Morgan E Grams; Aditya Surapaneni; Johan Arnlov; Nisha Bansal; Milica Bozic; Hermann Brenner; Nigel J Brunskill; Alex R Chang; Rajkumar Chinnadurai; Massimo Cirillo; Adolfo Correa; Natalie Ebert; Kai-Uwe Eckardt; Ron T Gansevoort; Orlando Gutierrez; Farzad Hadaegh; Jiang He; Shih-Jen Hwang; Tazeen H Jafar; Takamasa Kayama; Csaba P Kovesdy; Gijs W Landman; Andrew S Levey; Donald M Lloyd-Jones; Rupert W Major; Katsuyuki Miura; Paul Muntner; Girish N Nadkarni; David Mj Naimark; Christoph Nowak; Takayoshi Ohkubo; Michelle J Pena; Kevan R Polkinghorne; Charumathi Sabanayagam; Toshimi Sairenchi; Markus P Schneider; Varda Shalev; Michael Shlipak; Marit D Solbu; Nikita Stempniewicz; James Tollitt; José M Valdivielso; Joep van der Leeuw; Angela Yee-Moon Wang; Chi-Pang Wen; Mark Woodward; Kazumasa Yamagishi; Hiroshi Yatsuya; Luxia Zhang; Elke Schaeffner; Josef Coresh
Journal:  EClinicalMedicine       Date:  2020-10-14
  2 in total

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